Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g0384 | ATGGCAGAAGGGGAGGATATTCAGCCACTTGTCTGCGACAATGGAACAGGAATGGTTAAGGCTGGCTTTGCTGGAGATGATGCTCCAAGGGCCGTGTTTCCTAGTATAGTAGGTCGACCAAGGCATACCGGTGTGATGGTTGGCATGGGCCAAAAGGATGCGTATGTTGGGGATGAAGCTCAGTCCAAACGTGGTATATTAACTTTGAAATATCCCATAGAGCATGGTATAGTGAGCAATTGGGATGACATGGAGAAAATTTGGCATCATACCTTCTACAATGAACTCCGAGTGGCTCCTGAAGAGCACCCTGTCCTACTCACTGAAGCCCCTCTGAATCCAAAGGCAAATCGTGAAAAAATGACCCAAATCATGTTCGAGACCTTCAACGCTCCTGCCATGTATGTTGCCATTCAGGCCGTTCTTTCCCTCTACGCTAGTGGACGCACAACTGGTATTGTTTTGGATTCTGGAGATGGTGTCAGTCACACTGTCCCAATTTACGAGGGGTATGCTCTCCCCCATGCCATACTTCGTCTTGACCTCGCTGGCCGTGACCTCACTGATGCCCTTATGAAAATCTTGACTGAACGTGGGTATTCCTTCACCACCACAGCTGAGCGTGAAATTGTGAGGGACGTGAAGGAAAAACTGGCATATATTGCCCTTGACTTCGAGCAAGAACTTGAAACTTCCAAAACTGGTTCATCTGTTGAGAAGAGTTATGAACTTCCAGATGGGCAGGTTATCACAATTGGCGCAGAACGTTTCCGATGTCCTGAAGTTCTTTTCCAGCCTTCAATGATCGGAATGGAAGCTGCAGGCATCCATGAAACAACATATAACTCCATCATGAAATGTGATGTTGATATCAGGAAGGATCTGTATGGAAATATTGTTCTTAGTGGTGGATCAACCATGTTCCCAGGCATTGCTGACAGAATGAGCAAAGAAATAACTGCATTAGCCCCTAGCAGCATGAAAATTAAGGTGGTAGCTCCACCTGAAAGAAAGTACAGTGTCTGGATCGGTGGCTCCATTTTGGCATCCCTCAGCACATTTCAGCAGGTACACGACTTTTAG | 1083 | 46.54 | MAEGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDFEQELETSKTGSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVHDF | 360 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2796238 | 2798771 | + | Tan0021601.2 | Tan05g0384 | 751692 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g0384 | 360 | FunFam | Actin, muscle | 182 | 273 | - | - | |
Tan05g0384 | 360 | Gene3D | - | 140 | 340 | - | - | |
Tan05g0384 | 360 | CDD | NBD_sugar-kinase_HSP70_actin | 10 | 183 | - | - | |
Tan05g0384 | 360 | ProSitePatterns | Actins and actin-related proteins signature. | 106 | 118 | IPR020902 | - | |
Tan05g0384 | 360 | Gene3D | Actin; Chain A, domain 4 | 182 | 273 | - | - | |
Tan05g0384 | 360 | SUPERFAMILY | Actin-like ATPase domain | 149 | 357 | IPR043129 | - | |
Tan05g0384 | 360 | PANTHER | ACTIN | 8 | 354 | IPR004000 | GO:0005737(PANTHER) | |
Tan05g0384 | 360 | ProSitePatterns | Actins signature 1. | 55 | 65 | IPR004001 | - | |
Tan05g0384 | 360 | PRINTS | Actin signature | 28 | 37 | IPR004000 | - | |
Tan05g0384 | 360 | PRINTS | Actin signature | 63 | 85 | IPR004000 | - | |
Tan05g0384 | 360 | PRINTS | Actin signature | 142 | 161 | IPR004000 | - | |
Tan05g0384 | 360 | PRINTS | Actin signature | 238 | 254 | IPR004000 | - | |
Tan05g0384 | 360 | PRINTS | Actin signature | 117 | 130 | IPR004000 | - | |
Tan05g0384 | 360 | PRINTS | Actin signature | 51 | 62 | IPR004000 | - | |
Tan05g0384 | 360 | FunFam | Actin, alpha skeletal muscle | 3 | 178 | - | - | |
Tan05g0384 | 360 | SUPERFAMILY | Actin-like ATPase domain | 6 | 155 | IPR043129 | - | |
Tan05g0384 | 360 | Gene3D | - | 10 | 357 | - | - | |
Tan05g0384 | 360 | FunFam | Major actin | 259 | 340 | - | - | |
Tan05g0384 | 360 | SMART | actin_3 | 7 | 360 | IPR004000 | - | |
Tan05g0384 | 360 | Pfam | Actin | 5 | 357 | IPR004000 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g0384 | Tan-Chr5:2796238 | Tan08g1503 | Tan-Chr8:62355528 | 5.90E-202 | dispersed | |
Tan05g0383 | Tan-Chr5:2796238 | Tan05g0384 | Tan-Chr5:2796238 | 2.70E-205 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g0384 | K10355 | - | csv:101214246 | 704.131 |