Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0391 ATGGGTAACGGGATTGGGAAGCTCGGCGTTTGCTTCACCGGACTTAGCGACGGTCGGCGGCGGCCAGATATTTCCGTTCTGCTATCGAATCCACTCGATGAAGGGCTTGGCCACTCGTTCTGCTATGTTCGGCCTGATCCTTTGATGCTTTCGTCTTCAAAAGTTCATTCGGAAGAAACCACCACTTTCCGATCAATTTCCGGCGCCTCTGTAAGTGCCAATACATCGACGCCTCTTTCTACTGCTCTTGTTGATCTGTATTCGTACAATAGCATTGATCGAGCGGCGGCTTTTGAGAGTTCGACTTCTTTCGCTTCAATCCCTTTGCAGCCGATCCCTAGAAACATGATCAATTCGGGTCCGATTCCGGGTAATTTCAGTGGAATCCCCTGTTCGGGTCCTTTGGAAAGAGGGTTTCTATCGGGTCCGATTGAGCGAGGGTTTATGTCGGGTCCATTGGATCGGGGGATTTTTTCGGGTCCTCTTGATAATTCTGCATCTAGTGAGTTTCAGAGAAGTTTCTCTCATGGAGGAGGATTTAATTCCAGATCTAGATCGAGAAAAAGCCGGTTAATTCGGATTCTAAGAAGCGCAATTTCGAAGTCGATTTATCGAGGGCAAAATTCCATTGTGGCTCCGATTAAAGCGGTTAAAGAACCCGATTGGATCGTCATGTCCGAGAAGCATAATGAGAATTTGACTGTGAGTAGTTTGAATTTCAGTAGCGAGGGAAGTTTGGAGGATGATGATTCCATGGAGAGCCAAAATCTGCAGTGGGCTCAAGGAAAAGCAGGGGAAGATCGAGTTCATGTTGTGGTTTCTGAAGAACATGGCTGGGTTTTCGTTGGGATTTATGATGGATTTAACGGTCCCGATGCTCCTGATTATCTTTTGTCGAATTTGTACTCATCTGTTCATAAAGAGCTCAAAGGTTTGTTATGGGATGAAAAGCTGGATTCGGCCGGTGTTGCCGCTCCGGCCACTTCCCCTGTTCGATCTGAGAATTTTTGTTCAGAAACAAGAAATTCTTCGCAGGTTAATGACAGTGATTTGGAGAGGAATGGGGTGAGTGATGCTTGTTCTCAGTGTGTTGAACAAGAGAATCATCCTTGTGCTAGTGGAGATGGGAACTCTGGATCGAATTCGAGGAGAAGGAAAAGTAAGAATTCAAGAGGAAAGTTTAGAGGAGCTGCTGAGAAGTGGGAGGATAATCAGCGGCGGTGGAAGTGCGAATGGGACCGGGAACGATTAGAGCTCGATCGGAGGTTAAAGGAGCAGTTGAATCGATCTGGGTCACATGGTTCGAGGTCGATCAATCATTCGGATGTTTTGAAAGCTCTGTCCCAGGCATTAAAGAAAACAGAGGAGGCCTATTTGGATATTGCAGACAAGATGCTTGATGAAAATCCTGAACTGGCTTTGATGGGCTCTTGTGTGCTTGTGATGCTTATGAAGGGAGATGATGTCTATGTGATGAATGTTGGCGACAGCCGAGCTGTTTTAGCACAGAAGGCGGAGCCTGATTATTGGCTCGGGAAGGTTCGACAGGACTTGGAAAGGATTAATGAAGAGCCAGTTCATGACATTGAAGCATTAGATGGTGATAGAGCATTCACCTCAGCTAACCTTACTGCTTTTCAACTTTCCATGGATCACAGCACCAGTGTTGATGAGGAAGTTCAGAGAATTAAAAATGAACACCCTGATGATGCTGGTGCCGTGATGAACGACCGTGTGAAAGGCTCGTTGAAGGTTACTCGGGCGTTTGGTGCTGGTTTCCTGAAACAGCCTAAATGGAACAATGCACTATTGGAGATGTTCAGAATCGACTACGTCGGGAGATCGCCATACATTAATTGTCTACCATCTCTCTACCACCACAGATTGGGACCAAAAGACAGGTTTTTGATACTATCATCTGATGGACTTTACCAGTACTTCACAAACGAGGAAGCTATTTCTGAAGTCGAACTTTTCATCACATTGCAACCCGAAGGAGACCCGGCTCAACATCTGGTTGAACTACTGCTGTTTCGGGCTGCAAAGCGAGCTGGTACGAAACGACACCCACTCTAA 2076 46.34 MGNGIGKLGVCFTGLSDGRRRPDISVLLSNPLDEGLGHSFCYVRPDPLMLSSSKVHSEETTTFRSISGASVSANTSTPLSTALVDLYSYNSIDRAAAFESSTSFASIPLQPIPRNMINSGPIPGNFSGIPCSGPLERGFLSGPIERGFMSGPLDRGIFSGPLDNSASSEFQRSFSHGGGFNSRSRSRKSRLIRILRSAISKSIYRGQNSIVAPIKAVKEPDWIVMSEKHNENLTVSSLNFSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYSSVHKELKGLLWDEKLDSAGVAAPATSPVRSENFCSETRNSSQVNDSDLERNGVSDACSQCVEQENHPCASGDGNSGSNSRRRKSKNSRGKFRGAAEKWEDNQRRWKCEWDRERLELDRRLKEQLNRSGSHGSRSINHSDVLKALSQALKKTEEAYLDIADKMLDENPELALMGSCVLVMLMKGDDVYVMNVGDSRAVLAQKAEPDYWLGKVRQDLERINEEPVHDIEALDGDRAFTSANLTAFQLSMDHSTSVDEEVQRIKNEHPDDAGAVMNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGRSPYINCLPSLYHHRLGPKDRFLILSSDGLYQYFTNEEAISEVELFITLQPEGDPAQHLVELLLFRAAKRAGTKRHPL 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2812307 2815858 - Tan0018687.2 Tan05g0391 751699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0391 691 Coils Coil 444 464 - -
Tan05g0391 691 SMART PP2C_4 250 679 IPR001932 -
Tan05g0391 691 CDD PP2Cc 439 677 IPR001932 -
Tan05g0391 691 Pfam Protein phosphatase 2C 542 664 IPR001932 -
Tan05g0391 691 Pfam Protein phosphatase 2C 437 506 IPR001932 -
Tan05g0391 691 MobiDBLite consensus disorder prediction 367 398 - -
Tan05g0391 691 MobiDBLite consensus disorder prediction 325 353 - -
Tan05g0391 691 MobiDBLite consensus disorder prediction 331 353 - -
Tan05g0391 691 Gene3D - 226 689 IPR036457 -
Tan05g0391 691 ProSiteProfiles PPM-type phosphatase domain profile. 249 691 IPR001932 -
Tan05g0391 691 PANTHER PROTEIN PHOSPHATASE 2C 239 657 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Tan05g0391 691 SUPERFAMILY PP2C-like 263 681 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0949 Tan-Chr3:65987928 Tan05g0391 Tan-Chr5:2812307 2.90E-176 dispersed
Tan05g0391 Tan-Chr5:2812307 Tan10g1000 Tan-Chr10:8824062 2.80E-51 dispersed
Tan05g0390 Tan-Chr5:2812307 Tan05g0391 Tan-Chr5:2812307 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0391 - - - 0.0