Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0455 ATGCCGCCGCCAACTGCCTGCCGGTCCTTCTGCAACAAATTCCTCGCCCTTTTACTCCTGATTCTCCACCTCGGCTGCTTCCTTCTAACCACTTCCGACCACCGCCGCCGCCGCCACCGTCCCCCTCCGGCCAAGAAGCGAACCGAATCATCCCCGACGCCGTCGTGTCTGAAGCCGCATAAAGCCCTGACCTCTTCGATTTCATTTCTCAAACGAATCTTCTCTTCCAAAACCTGCAAGATGGCAATCGACACGACTCGCCCCTCTACTCCGGCCCGATCGTCGCAGCATTCGATCGTCACGCTAATCCAACCGGAGATTCCTCCGCCGGTAGATACTCCGAACTCTAAGAATCCTCCCGATTCCGCCGGAACGCCGCAGGATTCCGATATTACCACGGCGGAGATCAACCAATTCTTCCCTCTCCGCAACGATATCTTCCCCTGCACCGCCTGTGGCGAGATTTTCCCCAAGGCTCAATTGCTCGAACAGCACCAATCGGCGAAACACGCCGTGTCGGAGCTCGCCGATTCGGATTCCGGCAAGAACATCGTTCGGATCATCTTCGAAACCGGGTGGACGAGTAGAGAGAAAAGCCCTAAAATCCTCCGAATCTTGAAAATCCACAACAGCCAAAAGATTCTCTCCAGATTCGAGGAGTACCGGGAGTCGGTGAAGGCCAAAGCGGCCCGAAACGGCGGCGCCGTAAAGCGGCGGGACGAGCGGTGCATCGCCGACGGGAACGAGCTTCTGAGATTTCACTGTTCGACATTTCTGTGCGATTTGGGGCAAAATGGTAATTCCAGCATCTGCGGGCAGCAATTTTGTAGTATCTGTGGGATAATCAAATCGGGATTCTCACACAAGTTGGACGGAATTTCGACGCTATCGAGTAGCTGGAGGGCACACGTGGCAATCCCTGAGGACATCGAAGAGGAGTTCAAGTTCATGAACGTGAAGCGGGCGATTTTGGTTTGCCGGGTCGTAGCTGGTCGGGTCGGGTCCGACAACGAGGAGCCGGAGAAGGACGGCGGCGGGTTTGACTCCGTCGTCGGCCGGAGTGGGAGTGGGGCCCAGACGACGGTGGATGAAGATGAGCTGTTGGTTTTCAATCCGAGGGCTGTGCTCCCCTGCTTCGCAATCGTATACGAAATCTGA 1158 56.13 MPPPTACRSFCNKFLALLLLILHLGCFLLTTSDHRRRRHRPPPAKKRTESSPTPSCLKPHKALTSSISFLKRIFSSKTCKMAIDTTRPSTPARSSQHSIVTLIQPEIPPPVDTPNSKNPPDSAGTPQDSDITTAEINQFFPLRNDIFPCTACGEIFPKAQLLEQHQSAKHAVSELADSDSGKNIVRIIFETGWTSREKSPKILRILKIHNSQKILSRFEEYRESVKAKAARNGGAVKRRDERCIADGNELLRFHCSTFLCDLGQNGNSSICGQQFCSICGIIKSGFSHKLDGISTLSSSWRAHVAIPEDIEEEFKFMNVKRAILVCRVVAGRVGSDNEEPEKDGGGFDSVVGRSGSGAQTTVDEDELLVFNPRAVLPCFAIVYEI 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3161723 3163369 + Tan0021384.1 Tan05g0455 751763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0455 385 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 68 383 - -
Tan05g0455 385 SUPERFAMILY ADP-ribosylation 173 384 - -
Tan05g0455 385 Gene3D - 189 385 - -
Tan05g0455 385 ProSiteProfiles Zinc finger C2H2 type domain profile. 147 175 IPR013087 -
Tan05g0455 385 MobiDBLite consensus disorder prediction 34 60 - -
Tan05g0455 385 MobiDBLite consensus disorder prediction 105 130 - -
Tan05g0455 385 ProSitePatterns Zinc finger C2H2 type domain signature. 149 170 IPR013087 -
Tan05g0455 385 MobiDBLite consensus disorder prediction 335 358 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0455 Tan-Chr5:3161723 Tan11g1315 Tan-Chr11:11348893 5.80E-54 dispersed
Tan05g0455 Tan-Chr5:3161723 Tan01g1625 Tan-Chr1:16475212 7.50E-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27406 None None None None Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0455 - - - 0.0