Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0459 ATGAAGCGCTGCCGAAGCAAAGAAGAAAGACATGAAGAAGAAGGCACGCAAGGTTCAACGAAGAAAGCTAAAACTAGGGCAGAGAAGAAAGCCATTAGCGAGGGGAACACGTTTGATGATGGCTTTCCAAAATTACATAGTTCACCTAGTGCCAAACCAGATTGGAATCCTAAAGATAATGAACATATAAAAACAGCAAAAGAAGTGTTGCACGTATCAACAACCCCAACTACAATTATGTGCCGTGAGGATGAACAAAGTAGAATCCTCAATTTTTGCAAGTCTCGTGTGGAGCAAGAAAAAGCTGGTAGTTTGTATGTTTGCGGATGTCCAGGAACGGGCAAATCTTTGTCCATGGAGAAAGTGAAAAAACAGTTAGCTACTTGGGTGAAAGAGTCAGGTCTTCAGCTGCCATATATTTTGTCCATAAATTGCACTTCGTTAGCAAATACATCCGATATTTTCATTAAGATGATGGGCGAAGCCCAACCTCAAAAGAAAAGGAACAGCTCTTTAACACCCTTGCAACATCTTCAACGCCTATACTCCCAAAAGGCAGAGTCATCTTGCATGAAGATGATGTTGATAATAGCTGATGAATTGGATTATTTAATTACAAAGGATAAAGTAGTGCTTCATGATCTGTTCATGCTCACAACTTTTCCATTTTCAAGATGTATTTTGATAGGAATTGCGAATGCTATTGACTTAGCAGATCGCTTTCTTCCAAGACTTCAAGCATTGAATTGCAAACCCCAGGTCATAACTTATAAGGCTTATTCAAAGGATCAGATCCTCAAGATTCTTCAGCAAAGGTTAACTGTGCTTCCTTTCGTTTTCTTTCAACCGCAAGCACTGGAGCTCTGTGCTAGGAAAGTTGCAGCTGTGTCTGGAGATATGAGAAAAGCTCTTTGCGTTTGCAGAAATGCCATTGAGTTGTTAGAGGTGGAACTCAAAGCATCCTGTAAGGAGCTGAACCATAACGACGGGTGTGACTCTCCAGCACCTGAGTTTGTCAAAAGACAAGAGACTCATATTGTGAGGTTGGACCATATGGCTGTTGCCTTATCCAAGACTTTTAAATCACCAGCAGTGGAAACCATACAATCTCTTCCTCAACATCAACAGATTATTTTATGCTCTGTTGTAAAACTCGTTCGTCAAGGGAAGAAGGATACAACCATAGGAGAGCTAAACAAATCATACATAGATATCTGCAAATCAACACTAATCCCACCGGTGGGAACTTTGGAACTTTCAACTATGTTCACAGTGCTAAACGACCAGGGCCTTCTCAAACTTGGTCAGTCTCGAGATGATAAAATGAGGCGAGTGTTGTTGAAAGTTGACGAAGCTGATGTCGTGTTTGCATTACAGGGAATACGCTTCTTTCGAAACTGCCTACAGTAA 1410 40.99 MKRCRSKEERHEEEGTQGSTKKAKTRAEKKAISEGNTFDDGFPKLHSSPSAKPDWNPKDNEHIKTAKEVLHVSTTPTTIMCREDEQSRILNFCKSRVEQEKAGSLYVCGCPGTGKSLSMEKVKKQLATWVKESGLQLPYILSINCTSLANTSDIFIKMMGEAQPQKKRNSSLTPLQHLQRLYSQKAESSCMKMMLIIADELDYLITKDKVVLHDLFMLTTFPFSRCILIGIANAIDLADRFLPRLQALNCKPQVITYKAYSKDQILKILQQRLTVLPFVFFQPQALELCARKVAAVSGDMRKALCVCRNAIELLEVELKASCKELNHNDGCDSPAPEFVKRQETHIVRLDHMAVALSKTFKSPAVETIQSLPQHQQIILCSVVKLVRQGKKDTTIGELNKSYIDICKSTLIPPVGTLELSTMFTVLNDQGLLKLGQSRDDKMRRVLLKVDEADVVFALQGIRFFRNCLQ 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3185471 3191852 + Tan0009347.1 Tan05g0459 751767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0459 469 SMART Cdc6_C_2 379 458 IPR015163 -
Tan05g0459 469 CDD Cdc6_C 372 454 IPR015163 -
Tan05g0459 469 Pfam AAA domain 101 221 IPR049945 GO:0016887(InterPro)
Tan05g0459 469 PIRSF Cdc6 1 469 IPR016314 GO:0006270(InterPro)|GO:0051301(InterPro)
Tan05g0459 469 Pfam Cdc6/ORC-like, ATPase lid domain 260 317 IPR054425 -
Tan05g0459 469 Pfam CDC6, C terminal winged helix domain 366 457 IPR015163 -
Tan05g0459 469 SMART AAA_5 101 251 IPR003593 GO:0016887(InterPro)
Tan05g0459 469 FunFam Cell division control protein 60 248 - -
Tan05g0459 469 MobiDBLite consensus disorder prediction 1 59 - -
Tan05g0459 469 CDD AAA 85 249 - -
Tan05g0459 469 Gene3D - 253 342 - -
Tan05g0459 469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 317 IPR027417 -
Tan05g0459 469 SUPERFAMILY Winged helix DNA-binding domain 365 467 IPR036390 -
Tan05g0459 469 Gene3D - 58 252 IPR027417 -
Tan05g0459 469 Gene3D - 364 457 IPR036388 -
Tan05g0459 469 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 16 464 IPR050311 GO:0003688(PANTHER)|GO:0005634(PANTHER)|GO:0033314(PANTHER)
Tan05g0459 469 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0459 Tan-Chr5:3185471 Tan05g0461 Tan-Chr5:3185471 1.90E-245 dispersed
Tan05g0459 Tan-Chr5:3185471 Tan05g0460 Tan-Chr5:3185471 5.60E-269 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0459 K02213 - csv:101205741 731.095