Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0500 ATGGCCGTCGCCGCCTGCTCCACCGACTTCACCCGCGACTCCGGCTGTCGCGATGGCCGCGCCGCCACCCATCTCAAGCTCATTTCGATCTTCGTCATCTTCTTCACCAGCGTCATCGGCGTCTCTTTGCCGGTTCTCCTGACCCGCTTCTTCCACGGCAAACCGCTTTACGACAAAGCGATTCTAGTCATCAAGTGCTTCGCCGCCGGCGTGATTCTCTCGACGTCACTTGTCCACGTCCTCCCCGACGCCTTCGATGCCCTCTCCGACTGCCAGGTGGCGTCCCAACACCCATGGCGGGACTTCCCCTTCTCCGGGCTGGTCACCATGGTCGGCGCCCTGGTGGCGCTTCTCGTCGACGTGGCTGCGACGTCGCACGTGGAGCACGGAAACTATAATCCGGTGGGAACAGAGTCTGCAGGGGATATTGGGTTGCTGGTGTCGGCGGAGTCGAAATCGGAGATGGGGGATTTGGGTTGCCACCGGCGGCAAAGGGAAGAGGAATTGGTGAAGTTGAAGCAGAAACTTGTGTCTCAAGTTTTAGAAATTGGGATTATTTTTCACTCTGTGATTATTGGAGTTACGATGGGAATGTCCCAAAATCAATGCACTATTAAGCCTCTTGTTGCTGCTCTTGCATTTCATCAAATTTTTGAAGGAATGGGCCTCGGCGGCTGTATTGCTCAGGCAGGGTTCAGCTTCACAACGACGTCGTATATGTGTTTCATGTTCTCAGTAACAACGCCAATGGGGATAGTGTTAGGAATGGTACTGTTTTCAATAACTGGTTACGACGATAGCAGTCCCAAAGCTTTGATTATGGAAGGTTTATTGGGCTCATTTTCGTCGGGGATTCTCATATACATGGCTCTTGTTGATCTAATCGCCGTTGATTTTTTTCACAACAAGATGATGAGCTCAAATCAACGGCTGAAGAAGGCTTCTTTTATAGCCTTATTGCTCGGGTCGGCTTCGATGTCCATTTTAGCCTTGTGGGCATGA 1002 52.0 MAVAACSTDFTRDSGCRDGRAATHLKLISIFVIFFTSVIGVSLPVLLTRFFHGKPLYDKAILVIKCFAAGVILSTSLVHVLPDAFDALSDCQVASQHPWRDFPFSGLVTMVGALVALLVDVAATSHVEHGNYNPVGTESAGDIGLLVSAESKSEMGDLGCHRRQREEELVKLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNQCTIKPLVAALAFHQIFEGMGLGGCIAQAGFSFTTTSYMCFMFSVTTPMGIVLGMVLFSITGYDDSSPKALIMEGLLGSFSSGILIYMALVDLIAVDFFHNKMMSSNQRLKKASFIALLLGSASMSILALWA 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3438753 3440492 - Tan0014765.1 Tan05g0500 751808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0500 333 PANTHER ZINC/IRON TRANSPORTER 22 332 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Tan05g0500 333 Pfam ZIP Zinc transporter 24 330 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Tan05g0500 333 NCBIfam ZIP zinc/iron transport family 12 333 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0500 Tan-Chr5:3438753 Tan05g2801 Tan-Chr5:80134388 6.50E-62 dispersed
Tan05g0499 Tan-Chr5:3438268 Tan05g0500 Tan-Chr5:3438753 6.70E-184 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0500 K14709 - csv:101214729 526.554