Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0522 ATGGCTACCGAGGCGACTGAAGCCACGACTAAGTTCCAAAGTCCGGATTTTCGCCCGGTACCGTCGCCTCCGGATTTCCATCCCGAGATTATGGTTTCAGCCCATGATGGTCTCCGGTTCTGGCAGTTCATGATTGCCGGTTCAGTCGCGGGGTCTGTCGAGCATATGGCCATGTTCCCGGTTGATACCGTCAAGACCCATATGCAAGCCCTTGGTTCTTGTCCGATTAAATCTGTTGGAGTTCGACAAGCCCTTCGGTCAATTTTGAAGTCTGAGGGACCTGCTGGTTTTTATCGTGGTATTGGTGCTATGGGTCTCGGAGCTGGACCTGCACATGCTGTCTATTTTACAGTTTACGAGAATTGTAAGAAGTTTTTCTCTGGTGGGGATCCTAATAATTCAGTTGCCCACGCTGCTTCTGGCGTCTGTGCGACGGTGGCGAGTGACGCCGTCTTTACACCGATGGACATGGTTAAACAGAGGCTGCAGCTGAGTAATAGTCCTTACAACGGAGTTTTGGATTGTGTCAAAAGGGTTCTCAGAGACGAGGGTTTTAAAGCATTTTATGCATCATATAGAACTACAGTGTTAATGAATGCTCCATTTACTGCTGTGCATTTTGCCACTTATGAAGCTGCAAAGAGAGGTTTGACGGAGGTTTCGCCAGAGAGTGTAAGTGATGAACAGTGGATTGTTCATGCGACGGCAGGAGCTGCTGCTGGAGCCTCAGCTGCACTTGTTACGACGCCGCTTGATGTGGTTAAGACTCAATTACAATGTCAGGGTGTATGTGGATGTGATAGATTCAAAAGTGGGTCGATCGGGGACGTCCTTCGGACAATACTCAAGAAGGATGGATACAGAGGTCTTATGAGAGGATGGGTTCCAAGGATGCTGTTCCATGCTCCCGCTGCAGCTATTTGCTGGTCGACATATGAAGCGTTAAAATCGTTCTTCCAAGACGTCAACAGCAGCAGTGACAACGTGACCTGA 993 48.94 MATEATEATTKFQSPDFRPVPSPPDFHPEIMVSAHDGLRFWQFMIAGSVAGSVEHMAMFPVDTVKTHMQALGSCPIKSVGVRQALRSILKSEGPAGFYRGIGAMGLGAGPAHAVYFTVYENCKKFFSGGDPNNSVAHAASGVCATVASDAVFTPMDMVKQRLQLSNSPYNGVLDCVKRVLRDEGFKAFYASYRTTVLMNAPFTAVHFATYEAAKRGLTEVSPESVSDEQWIVHATAGAAAGASAALVTTPLDVVKTQLQCQGVCGCDRFKSGSIGDVLRTILKKDGYRGLMRGWVPRMLFHAPAAAICWSTYEALKSFFQDVNSSSDNVT 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3603389 3606664 + Tan0016008.1 Tan05g0522 751830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0522 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 125 IPR018108 -
Tan05g0522 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 228 318 IPR018108 -
Tan05g0522 330 FunFam Mitochondrial RNA-splicing protein MRS3 167 330 - -
Tan05g0522 330 Pfam Mitochondrial carrier protein 132 219 IPR018108 -
Tan05g0522 330 Pfam Mitochondrial carrier protein 228 321 IPR018108 -
Tan05g0522 330 Pfam Mitochondrial carrier protein 38 128 IPR018108 -
Tan05g0522 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 216 IPR018108 -
Tan05g0522 330 SUPERFAMILY Mitochondrial carrier 36 314 IPR023395 -
Tan05g0522 330 Gene3D Mitochondrial carrier domain 133 330 IPR023395 -
Tan05g0522 330 PANTHER MITOFERRIN-1-RELATED 33 322 - GO:0015093(PANTHER)|GO:0031966(PANTHER)|GO:0048250(PANTHER)
Tan05g0522 330 PRINTS Mitochondrial carrier protein signature 147 165 IPR002067 GO:0055085(InterPro)
Tan05g0522 330 PRINTS Mitochondrial carrier protein signature 237 259 IPR002067 GO:0055085(InterPro)
Tan05g0522 330 PRINTS Mitochondrial carrier protein signature 56 70 IPR002067 GO:0055085(InterPro)
Tan05g0522 330 PRINTS Mitochondrial carrier protein signature 43 56 IPR002067 GO:0055085(InterPro)
Tan05g0522 330 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0759 Tan-Chr3:63552943 Tan05g0522 Tan-Chr5:3603389 1.00E-122 dispersed
Tan05g0522 Tan-Chr5:3603389 Tan07g1639 Tan-Chr7:67832785 1.10E-32 dispersed
Tan05g0522 Tan-Chr5:3603389 Tan06g0146 Tan-Chr6:1343377 1.70E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0522 K15113 - csv:101215924 627.091