Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0532 ATGGCAGCCATTGGCTCTCTTTTGCTTTGTGTTTTTATTTTATCAGCTTCCCTGAGCCATAGCCATGCACAGCTAACACCAGACTTTTACAAGAAAGTCTGCCCTAACGCGTTACCGACGATCAAAACCGTCGTCTGGAGCGCCATCAAACGCGAGCCTCGAATGGGAGCTTCGCTCTTACGTCTCCATTTTCACGACTGCTTTGTCAATGGTTGTGATGGGTCGGTTTTGTTGGATGATACCGCTACTTTCACTGGAGAAAAGACTGCTTTTCCTAATAGAAACTCCATTAGAGGATTTGAAGTTGTTGATCAGATTAAGAAACAAGTTAACAAAGCTTGCAAAGCCAATGTTGTTTCTTGTGCTGACATCTTAGCCGTTGCTGCTCGCGACTCTGTCGCTATCCTTGGCGGGCCGAACTACAAAGTACTACTAGGGAGAAGAGATGCAAGAACGGCGAGTACAAACGATGCCAACACGAATCTCCCTCCACCATTTTTCAACTTCACACAGCTTCTATCCAACTTCCAAGCTCATGGCCTCGACCTCAAAGACCTCGTCGTGTTATCGGCCGGCCACACCCTCGGCTTCGCTCGGTGCACCACATTTCGAAGCAGGATATACAACGACACCAACATCGACCCGGGATTCGCAGCCATGCTGCAGGCGAAGTGCCCGCCGAGCGGTAACGATGACAGGCTGCAGGGCCTGGACAAGAGTCCAGTTTTCTTTGACACTGCCTACTTCAAGGCATTGTTGAAGAAGAAGGGCCTTCTCCATTCCGATCAGGAACTCTTGGGCGGCGGCAATGGCGACAGTGATAATTTGGTGTCGTTTTACAGCAGATATCCATTTGCCTTCAGAGATGACTTTGGTTCTTCCATGATCAAAATGGGCAATATCAAGCCACTTACTGGAACTGATGGGGAAATTAGAGCCAATTGCAGGCTTGTCAACTAA 960 48.54 MAAIGSLLLCVFILSASLSHSHAQLTPDFYKKVCPNALPTIKTVVWSAIKREPRMGASLLRLHFHDCFVNGCDGSVLLDDTATFTGEKTAFPNRNSIRGFEVVDQIKKQVNKACKANVVSCADILAVAARDSVAILGGPNYKVLLGRRDARTASTNDANTNLPPPFFNFTQLLSNFQAHGLDLKDLVVLSAGHTLGFARCTTFRSRIYNDTNIDPGFAAMLQAKCPPSGNDDRLQGLDKSPVFFDTAYFKALLKKKGLLHSDQELLGGGNGDSDNLVSFYSRYPFAFRDDFGSSMIKMGNIKPLTGTDGEIRANCRLVN 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3697142 3699028 - Tan0019361.1 Tan05g0532 751840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0532 319 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0532 319 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0532 319 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0532 319 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0532 319 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0532 319 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0532 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0532 319 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0532 319 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0532 319 FunFam Peroxidase 163 298 - -
Tan05g0532 319 Gene3D Peroxidase, domain 2 163 298 - -
Tan05g0532 319 PANTHER PEROXIDASE 72-RELATED 11 317 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0532 319 CDD secretory_peroxidase 24 318 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan05g0532 319 SUPERFAMILY Heme-dependent peroxidases 24 319 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0532 319 FunFam Peroxidase 28 168 - -
Tan05g0532 319 Gene3D - 28 316 - -
Tan05g0532 319 Pfam Peroxidase 42 267 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0532 319 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0532 319 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0532 319 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0532 319 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0532 319 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0532 319 ProSiteProfiles Plant heme peroxidase family profile. 24 319 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0532 319 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
Tan05g0532 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0532 Tan-Chr5:3697142 Tan11g0318 Tan-Chr11:2494991 8.00E-94 dispersed
Tan05g0532 Tan-Chr5:3697142 Tan05g0534 Tan-Chr5:3713821 3.00E-88 proximal
Tan05g0532 Tan-Chr5:3697142 Tan08g2424 Tan-Chr8:75472120 1.70E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0532 K00430 - csv:101204979 521.546