Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0534 ATGGCTATGGCTTTAGCATTAGCCTTATTGGCAATGTTCATGGGGAGCTCCTCAGCTCAGCTCTCTACCGACTTCTACTACTATAGCTGCCCCAAGCTCCTCGACACCGTTAGAGCCGGTATTCAATCCGCCGTCGCTAAGGAAGCTCGCATGGGCGCTTCCCTTCTCCGCCTCCACTTTCATGACTGCTTCGTTAACGGTTGTGATGGATCGATTCTTCTCGAAGACACTCCTACGTTTACAGGAGAGCAAACAGCAGCTCCCAACAACAGATCTGTTAGAGGGTTCGAAGTGATTGAGAGTATAAAGAAAAACGTTGAAAAAATTTGTCCTGGTGTTGTCTCTTGTGCTGATATTTTGACTCTTTCTGCTCGTGACTCGGTGGTAGCTCTTGGAGGGCCAAGTTGGAAGGTGAAATTGGGAAGAAGAGACTCTGTAACAGCCAGCTTCTCCGACGTGACCGGAGCCATTCCGCCGCCAACCTCCACACTTGACACCCTCATCGACCGGTTCAATACTAAAGGCCTTTCCCCTCGAGATTTGGTTGCTTTATCTGGGGCCCACACGATCGGACAAGCAAAGTGTTTGTTTTTCAAGAACCGTATATACAACGAGACGAACATCGACGAGTCGTTCGCGGAGGAGAGACAGAGGAATTGTCCAGTAAATGGAGGAGACGACAATCGGGCGCCATTGGACTTTAGAACTCCGAATCTTTTTGACAACTATTATTACAAGAACCTTATGGATCAAAAGGCTCTACTCCGGTCCGATCAAGTGCTACACGACGGCGGATCCACCGATTCCTTGGTTGAACTTTACAGCCACGACAGTGACGCCTTCGAGTCTGACTTTGTCGCGGCCATGATCAAGATGGCCGACATCCAGCCGCTCACTGGCTCCCAAGGCCAAATTCGAAAGCTCTGCAGAAGAACGCATAGTGAGAGTAAAGAGATTTCGAAATTTCCAAAGACTCCACAAAATAGTGATAGCCTTGGAAAGGTTTTCGATACTAAGAGTCTTTATCATCCATCCCCAAAAGTCAAGAGGGGACCAGAAATCCCTGCAAACAGAGAAAAGTTCAGTCATAATAGGAAAATAGTAAAGCCACACTTTCGAGACTCATTTGCATGTCCAGAAGGCGTGACAATGGCCATTTCTACTTCTCACACTCCAAAAAATATGGTGGTTTTGGTCTTAGCTTTGCATCTCTTCCTTTTCATGAGCACCTCTTCAGCCCAACTCTCCATTAACTTCTACTCCAAGACTTGCCCTAAGCTCCTCTCTACCGTCCGCTCGGGCGTCCAATCCGCCATTTCTAAGGAAACCCGCATCGGCGCTTCACTCCTTCGTCTCCACTTCCACGACTGCTTTGTTAACGGATGCGATGGGTCAATTCTTTTAGCGGACACTCCAAATTTCAGAGGAGAGCAAACAGCACCTCCAAATAATAGGTCTGTTAGAGGCTTTAATGTCATAGAAGCCATCAAGAGCAACGTAGAAAAAATTTGCCCCGTGTTGTCTCATTTGGGAGGGCCAAACTGGGAAGTGAAATTAGGAAGAAGAGATTCAAAAACAGCCAGTTTCTCTGCGGCCAGCAGTGGCGTCATCCCTCCACCGACTTCAACTCTCGACAACCTCATCAGTCGATTCGGTGCCTTAGGACTTTCTGCCAGAGACATGGTTGCTTTGTCTGGGGCTCACACGATAGGCTTAGCAAGGTGCACAGTGTTCAGGAACCGGATATACAACGAGACCAATATAAACGCTTCATTCGCTAAGCTAAGACAGAGCAGCTGCCCGAGAAGAGGAGGAGATGACAATCTTGCCCCTCTCGACGTGGCAACGCCTAAGCTTTTCGACAACTATTATTTCAAGAATCTGTTGAACAAAAAGGGCTTGCTCCACTCCGACCAGATCCTATACAACGGCGGATCCACCGATTCCTTGGTCGAACTCTACAGTAAAAATGATCGGACTTTCGACGCCGATTTCGTCGCCGCCATGATTAGAATGGGAGATATCCAGCCGCTCACCGGATCTCAGGGCCAGATCAGGAAGCTCTGCAGCAGACCCAACTGA 2082 48.46 MAMALALALLAMFMGSSSAQLSTDFYYYSCPKLLDTVRAGIQSAVAKEARMGASLLRLHFHDCFVNGCDGSILLEDTPTFTGEQTAAPNNRSVRGFEVIESIKKNVEKICPGVVSCADILTLSARDSVVALGGPSWKVKLGRRDSVTASFSDVTGAIPPPTSTLDTLIDRFNTKGLSPRDLVALSGAHTIGQAKCLFFKNRIYNETNIDESFAEERQRNCPVNGGDDNRAPLDFRTPNLFDNYYYKNLMDQKALLRSDQVLHDGGSTDSLVELYSHDSDAFESDFVAAMIKMADIQPLTGSQGQIRKLCRRTHSESKEISKFPKTPQNSDSLGKVFDTKSLYHPSPKVKRGPEIPANREKFSHNRKIVKPHFRDSFACPEGVTMAISTSHTPKNMVVLVLALHLFLFMSTSSAQLSINFYSKTCPKLLSTVRSGVQSAISKETRIGASLLRLHFHDCFVNGCDGSILLADTPNFRGEQTAPPNNRSVRGFNVIEAIKSNVEKICPVLSHLGGPNWEVKLGRRDSKTASFSAASSGVIPPPTSTLDNLISRFGALGLSARDMVALSGAHTIGLARCTVFRNRIYNETNINASFAKLRQSSCPRRGGDDNLAPLDVATPKLFDNYYFKNLLNKKGLLHSDQILYNGGSTDSLVELYSKNDRTFDADFVAAMIRMGDIQPLTGSQGQIRKLCSRPN 693
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3713821 3740496 + Tan0018205.1 Tan05g0534 751842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0534 693 Gene3D Peroxidase, domain 2 158 292 - -
Tan05g0534 693 Gene3D Peroxidase, domain 2 538 672 - -
Tan05g0534 693 Gene3D - 24 310 - -
Tan05g0534 693 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Tan05g0534 693 ProSitePatterns Peroxidases proximal heme-ligand signature. 560 570 IPR019793 -
Tan05g0534 693 ProSiteProfiles Plant heme peroxidase family profile. 414 693 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 FunFam Peroxidase 24 165 - -
Tan05g0534 693 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 PRINTS Plant peroxidase signature 231 246 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 PRINTS Plant peroxidase signature 247 264 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 SUPERFAMILY Heme-dependent peroxidases 414 693 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 PANTHER PEROXIDASE 72-RELATED 9 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 FunFam Peroxidase 158 292 - -
Tan05g0534 693 ProSitePatterns Peroxidases active site signature. 446 457 IPR019794 GO:0004601(InterPro)
Tan05g0534 693 CDD secretory_peroxidase 414 691 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan05g0534 693 Pfam Peroxidase 37 276 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 Pfam Peroxidase 431 657 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 SUPERFAMILY Heme-dependent peroxidases 20 311 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 CDD secretory_peroxidase 20 312 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan05g0534 693 Gene3D - 418 690 - -
Tan05g0534 693 FunFam Peroxidase 538 672 - -
Tan05g0534 693 ProSiteProfiles Plant heme peroxidase family profile. 20 313 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601(InterPro)
Tan05g0534 693 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0534 693 PRINTS Haem peroxidase superfamily signature 233 248 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1752 Tan-Chr4:46665973 Tan05g0534 Tan-Chr5:3713821 9.20E-98 dispersed
Tan05g0534 Tan-Chr5:3713821 Tan11g0318 Tan-Chr11:2494991 8.90E-106 dispersed
Tan05g0532 Tan-Chr5:3697142 Tan05g0534 Tan-Chr5:3713821 3.00E-88 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0534 K00430 - rcu:8265433 613.609