Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0537 ATGCCGGAGATCGAACCTTTCTCTGCCGATAACAATGTCCTGTTCGGCAAGTACGAGCTCGGCAAGCTCCTGGGCTGCGGTGCCTTTGCCAAAGTCTACCATGCCCGCGACCTTCGCTCCGGCCAGAGTGTTGCCGTTAAAGTCATCAACAAGAAGAAGATCTACGGCACAACGCTAATGTCCAACATCAAGCGGGAGATCGCCATCATGCGCCGTCTCCGGCACGCGCACATCGTCAAACTCCATGAAATTCTCGCCACTAAATCCAAGATCTACTTCGTCATGGAGTTCGTCAAAGGCGGCGAGCTCTTCGCCAAGATCGCCAAGGGCCGATTCAGCGAGGATTTGAGCAGGAGATTCTTTCAGCAGTTGATCTCCGCCGTCGGATTCTGTCACGCGCGTGGAATCTACCACCGCGATCTGAAGCCGGAGAATCTCCTCGTCGACGAGAATGGGAATCTGAAGGTTTCGGACTTCGGTCTCAGTGCGGTAACGGACCAGATTCGGTCCGATGGCCTTTTGCACACTCTGTGTGGAACTCCGGCGTATGTCGCACCGGAGATTTTGTCGAAGAAGGGCTACGACGGTGCGAAAGTCGATGTGTGGTCCTGTGGTGTGATTCTTTTCGTGTTGACCGCCGGTTACCTTCCGTTCAACGATCCGAATCTAATGGCGATGTACAAGAAGATTTACAAGGGGGAATATCGGTGCCCTAAATGGATGTCGCCGGACCTCAAAAGGTTTTTATCGCGACTTCTCGATACGAATCCGCAAACAAGAATCACCGTCGATGAGATTCTGACCGATCCATGGTTCAGAAAAGGAGAAAATAAGGAGATCAATTTCTTCGATGATTACGAAATGAAATCGGAAGAAAAGGACGAATCTCAATCGACGAATTTGAATGCATTCGACATTATATCGTTCTCCTCAGGATTAGATCTGTCCGGTTTGTTCGACAATTCGCACAACACGGTGGAGGACAGCGAGCGATTCGTATCGGCGGAGTCGCCGGAGAGGATCGTGGAGAAAGTCGAAGAATTCGCTAGGGCAGAGAATTTGAGGGTGAAGAAACAGAAGGAATTTGGAGTTGAATTGGATGGGCAGAATCGTAATTTGTCCATCGGAATCGAAATTTTCCGGTTAACCGACAGATTGGTGGTGGTGGAGGCGAGAAGAAGAAGTGGAGAAGCAGAATCGTATAAGGAATTGTTGAAGAAGAAGCTGAGAGGTCATCTCACCGGCAACGAAGCTTCGACGTCGACGTCCCGACAAGATTCCGGCGACCAGAACCAGTGA 1299 50.58 MPEIEPFSADNNVLFGKYELGKLLGCGAFAKVYHARDLRSGQSVAVKVINKKKIYGTTLMSNIKREIAIMRRLRHAHIVKLHEILATKSKIYFVMEFVKGGELFAKIAKGRFSEDLSRRFFQQLISAVGFCHARGIYHRDLKPENLLVDENGNLKVSDFGLSAVTDQIRSDGLLHTLCGTPAYVAPEILSKKGYDGAKVDVWSCGVILFVLTAGYLPFNDPNLMAMYKKIYKGEYRCPKWMSPDLKRFLSRLLDTNPQTRITVDEILTDPWFRKGENKEINFFDDYEMKSEEKDESQSTNLNAFDIISFSSGLDLSGLFDNSHNTVEDSERFVSAESPERIVEKVEEFARAENLRVKKQKEFGVELDGQNRNLSIGIEIFRLTDRLVVVEARRRSGEAESYKELLKKKLRGHLTGNEASTSTSRQDSGDQNQ 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3755413 3757777 - Tan0013441.1 Tan05g0537 751845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0537 432 ProSiteProfiles NAF domain profile. 296 320 IPR018451 GO:0007165(InterPro)
Tan05g0537 432 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0537 432 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0537 432 Gene3D Kinase associated domain 1, KA1 297 415 - -
Tan05g0537 432 MobiDBLite consensus disorder prediction 412 432 - -
Tan05g0537 432 CDD CIPK_C 302 413 - -
Tan05g0537 432 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524(InterPro)
Tan05g0537 432 FunFam Non-specific serine/threonine protein kinase 296 416 - -
Tan05g0537 432 SMART serkin_6 18 272 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0537 432 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Tan05g0537 432 Gene3D Transferase(Phosphotransferase) domain 1 100 279 - -
Tan05g0537 432 Pfam NAF domain 299 358 IPR004041 GO:0007165(InterPro)
Tan05g0537 432 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 405 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Tan05g0537 432 MobiDBLite consensus disorder prediction 414 432 - -
Tan05g0537 432 FunFam Non-specific serine/threonine protein kinase 8 302 - -
Tan05g0537 432 SUPERFAMILY Protein kinase-like (PK-like) 14 280 IPR011009 -
Tan05g0537 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0537 432 Gene3D Phosphorylase Kinase; domain 1 6 99 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0723 Tan-Chr3:62846594 Tan05g0537 Tan-Chr5:3755413 5.50E-151 dispersed
Tan05g0537 Tan-Chr5:3755413 Tan08g0370 Tan-Chr8:3345695 1.20E-121 dispersed
Tan05g0536 Tan-Chr5:3750566 Tan05g0537 Tan-Chr5:3755413 2.20E-114 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67573 PF00069 Pkinase 5.40E-72 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0537 - - - 0.0