Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g0540 | ATGTTCAAGAATACTCGAGCTGGGAATCCCAGCAGCAACCACCATGATTCGAACTCGGAATTTGGGTACGTTGAGACCGATCCGACAGGTCGTTACGGCCGTTTTGAAGAAGTCTTGGGAAAAGGGGCCATGAAGACAGTGTATAAAGCCATTGACGAGTTTCTTGGAATAGAGGTGGCGTGGAGTCAGGTGAAACTCAATGAAGTCCTCCGATCACCCGAGGATCTGCAGCGGCTGTATTCGGAAGTTCACTTACTTAGCACGCTTAAGCACGAATCAATCATGCGATTCTACACCTCTTGGATCGATGTTGATCGCAAAACCTTCAACTTCATTACCGAACTGTTTACTTCTGGAACACTCAGAGAATATGGGAAGAAATATAGGCAAGTCGATATCAGAGCCATTAAGAGCTGGGCGCGCCAAATCCTGCAGGGGCTCATTTATTTGCACGAGCACGATCCTCCGATAATACACCGAGATTTGAAGTGCGATAACATCTTTGTCAATGGCCATCTTGGGCAAGTCAAGATTGGTGACTTGGGGCTTGCAGCTATACTCCATGGCTCTAGATCCGCTCACAGTGTTATAGGCACACCAGAGTTTATGGCACCGGAATTATACGAGGAGAATTACAATGAGCTAGTTGATGTCTACTCGTTTGGCATGTGTGTTCTGGAGATGCTTACTGCTGAGTATCCATATAGCGAGTGTTCTAATCCTGCACAGATTTACAAGAAAGTCACGTCGGGGAAGCTGCCAGCAGCGTTGTACAAGATTCAGGACGTGGAAGCGCAGAAATTTATTAAGAAATGCTTGGTACCAGTATCAATGAGGGCGTCTGCAAAGGAACTGTTGGATGATCCTTTTCTCATGGTTGATGGAGATAGACCTTCCTTGAAGGAGAGGAATCACAACCAGAAGCCATTTCTAAATGCCAAAGAGATGGAGAAATTGCACTTGGGTGAAGGTTTAAGCAGGACGAACATGACGATCACGGGGAAGCTGAACCCCGAAGACGATACCCTCTTTCTCAGAGTTCAGACTGCAGATAAAAATGGCTCTCTTAGGAACATATACTTCCCCTTCGACATAGTGAACGATACAGCATTAGATGTGGCGATGGAAATGGTGAAAGAGTTGGAGATCTCTGATTGGGAGCCGTTCGAAATAGCAGACATGATCGAAGGAGAGATATCGGCTCTGGTTCCAAACTGGAATAGAAGTGAGTTATCCAACCATAGCCTCAGCTTCAGCTATGCAGAAGAAGACGATGTTGCATCTCATCATACGTACCGCTCTATCTCCTCGTCGTCCCAAGCAACAACTTTGGGTCTCACCACCTCCCCAAGAACAAATCAAAACATATCAAATGGTTTTAGTTGGTTCCCAGATGATGCACTTGATGATAGCAGTTCCCAGTGCTCGTCAGCATCGGGAGCGTACTCCAACTTGAATTACATCAGCAGCGACGAGTACGAGACCAGTATGAGTTCAGTCCGAATAGACCAACATAACAACATCAATAAGATTCACAACTCCTCAAGATTTTGTCCCATTGAGAACCGCAGAAACAAGGATTTCTTGGCCGGACTTTTATACAAGCAGAGCCAATGTGCGGTAGGGCCATCTCAAGGAGCTGCCTCTGGCCGTAAAGACAAGAGGGGGGGAGTGGATGGTCGTAGATTAACAAGAAACAGATCCCTAGTTGATGTACATAGCCAATTGTTACATCGTTCGTTGGTCGAGGAAGTGAATAGAAGACGGTTATTCAAGACAGTTGGAGCAGTTGAAAGCATCGGTTTTCAAGCACCTTGTGAGGTTTCTTCCAACAAAAGGGTCTCGAGTAGGCAAACGATCTGGAACCGAAGTAGCGATGTATCGAGAGCAGGGAGAAATGACGATATTAGGCAAGATGTTGGAAGGAGAACATGA | 1935 | 46.1 | MFKNTRAGNPSSNHHDSNSEFGYVETDPTGRYGRFEEVLGKGAMKTVYKAIDEFLGIEVAWSQVKLNEVLRSPEDLQRLYSEVHLLSTLKHESIMRFYTSWIDVDRKTFNFITELFTSGTLREYGKKYRQVDIRAIKSWARQILQGLIYLHEHDPPIIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSRSAHSVIGTPEFMAPELYEENYNELVDVYSFGMCVLEMLTAEYPYSECSNPAQIYKKVTSGKLPAALYKIQDVEAQKFIKKCLVPVSMRASAKELLDDPFLMVDGDRPSLKERNHNQKPFLNAKEMEKLHLGEGLSRTNMTITGKLNPEDDTLFLRVQTADKNGSLRNIYFPFDIVNDTALDVAMEMVKELEISDWEPFEIADMIEGEISALVPNWNRSELSNHSLSFSYAEEDDVASHHTYRSISSSSQATTLGLTTSPRTNQNISNGFSWFPDDALDDSSSQCSSASGAYSNLNYISSDEYETSMSSVRIDQHNNINKIHNSSRFCPIENRRNKDFLAGLLYKQSQCAVGPSQGAASGRKDKRGGVDGRRLTRNRSLVDVHSQLLHRSLVEEVNRRRLFKTVGAVESIGFQAPCEVSSNKRVSSRQTIWNRSSDVSRAGRNDDIRQDVGRRT | 644 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 3779961 | 3784191 | - | Tan0015509.1 | Tan05g0540 | 751848 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g0540 | 644 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 157 | 169 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan05g0540 | 644 | SMART | serkin_6 | 33 | 291 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g0540 | 644 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Tan05g0540 | 644 | MobiDBLite | consensus disorder prediction | 628 | 644 | - | - | |
Tan05g0540 | 644 | FunFam | Probable serine/threonine-protein kinase WNK1 | 17 | 114 | - | - | |
Tan05g0540 | 644 | MobiDBLite | consensus disorder prediction | 624 | 644 | - | - | |
Tan05g0540 | 644 | ProSiteProfiles | Protein kinase domain profile. | 33 | 291 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g0540 | 644 | FunFam | probable serine/threonine-protein kinase WNK9 | 116 | 296 | - | - | |
Tan05g0540 | 644 | CDD | STKc_WNK | 31 | 291 | - | - | |
Tan05g0540 | 644 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 18 | 600 | IPR050588 | GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER) | |
Tan05g0540 | 644 | Pfam | Protein kinase domain | 36 | 291 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g0540 | 644 | Gene3D | Phosphorylase Kinase; domain 1 | 17 | 114 | - | - | |
Tan05g0540 | 644 | Gene3D | Transferase(Phosphotransferase) domain 1 | 116 | 295 | - | - | |
Tan05g0540 | 644 | MobiDBLite | consensus disorder prediction | 542 | 562 | - | - | |
Tan05g0540 | 644 | SUPERFAMILY | Protein kinase-like (PK-like) | 34 | 446 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g0719 | Tan-Chr3:62706325 | Tan05g0540 | Tan-Chr5:3779961 | 1.10E-174 | dispersed | |
Tan05g0540 | Tan-Chr5:3779961 | Tan06g2524 | Tan-Chr6:77851752 | 7.70E-136 | dispersed | |
Tan05g0540 | Tan-Chr5:3779961 | Tan03g2516 | Tan-Chr3:78512855 | 4.70E-16 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67574 | PF00069 | Pkinase | 2.40E-47 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g0540 | K08867 | - | csv:101203757 | 1141.33 |