Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0544 ATGCAAGATCCAGCGTCTTCAAACCCTATCCACACTCCCAATCCCAATCAAATTCCTCCACTCAATGCTGCATCGCCGCCGGCAGTAGCTCCGGCGCCGCCGAACACTCACAAACCGCCGCCGGTGGCGAATGCGACGGCTTCCTCGTCGATGTTTGCGAATGCGAATGCTGGTAATGGCTCGTTTGTTCCTAGAGGTGGTTCTCATCACCGGAGGGCTCATTCGGAAGTTAGCTTCCGGCTGACAGAGGACATGATGGATCTCTCCGGGTCGGATCCGTTCAACGGCGGTTCGTCGACGGCCAGTCTGGAGGAGATCGGATCGGAGGATGATCTGTTTTCGACCTACATTGATGTGAAGAAGCTTGGAGGTAATGGAGGAGGGAATTTCGTAGATCATAATGCCAACGGCGGATGTGAAGGCGCCGGTGGTAGTGAGGGAGAGAAGACTTCGAAGCCAAGGCATCGGCATAGCATTTCGGTGGATGGAACGACGTCGTCGTCGAGTATGTTTGGGGAGATTATGGAAGCGAAGAAAGCTATGCCTCCTGATAAGTTAGCTGAGCTTTGGACCAGTGACCCCAAACGCGCCAAAAGGATCTTGGCAAATCGACAGTCTGCTGCTCGCTCAAAAGAGAGGAAGGCACGGTATATACAAGAGTTGGAGCGCAAAGTGCAGACCCTTCAAACAGAAGCAACTACTCTATCAGCTCAATTGACTTTGTTCCAGCGAGACACAACGGGTCTCAGTACTGAGAATACAGAGCTTAAGCTTCGGTTGCAGGCTATGGAGCAACAAGCCCAATTGCGTGATGCTCTAAACGAAGCGTTAAAGAAGGAAGTTGAGAGGCTTAAAATCGCTACCGGAGAAATGATGAGCCCTTCCGATTCTTTTAACTTGGGAATGCATCACATGATGGCATACGCCCCATCGTCTTTCATTCAACTTTCACAGCAACCGGGAGCTGCAGGCCATCAGAATATGCAAATGCCACCATATAGCCATTCCCCATCTAACATGTCTAGCCACCCTATGCACCCATCAGATTCTCATTCTCTCTCAGAGGTTCTGCAGAGCGATCCTCTCGGTCGATTACAGGGTCTCGACATCAGTAGTAAAGGATCGTCGCTTGTGAAATCCGAGGGCCCCTCAATCTCTGCTAGTGAGAGCAGTACAACCTTTTGA 1185 51.14 MQDPASSNPIHTPNPNQIPPLNAASPPAVAPAPPNTHKPPPVANATASSSMFANANAGNGSFVPRGGSHHRRAHSEVSFRLTEDMMDLSGSDPFNGGSSTASLEEIGSEDDLFSTYIDVKKLGGNGGGNFVDHNANGGCEGAGGSEGEKTSKPRHRHSISVDGTTSSSSMFGEIMEAKKAMPPDKLAELWTSDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKIATGEMMSPSDSFNLGMHHMMAYAPSSFIQLSQQPGAAGHQNMQMPPYSHSPSNMSSHPMHPSDSHSLSEVLQSDPLGRLQGLDISSKGSSLVKSEGPSISASESSTTF 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3833222 3836419 - Tan0021205.1 Tan05g0544 751852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0544 394 SMART brlzneu 191 255 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g0544 394 Gene3D - 194 247 - -
Tan05g0544 394 FunFam probable transcription factor PosF21 194 247 - -
Tan05g0544 394 SUPERFAMILY Leucine zipper domain 195 246 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g0544 394 MobiDBLite consensus disorder prediction 319 394 - -
Tan05g0544 394 MobiDBLite consensus disorder prediction 319 359 - -
Tan05g0544 394 Coils Coil 259 290 - -
Tan05g0544 394 MobiDBLite consensus disorder prediction 369 394 - -
Tan05g0544 394 MobiDBLite consensus disorder prediction 1 74 - -
Tan05g0544 394 MobiDBLite consensus disorder prediction 41 57 - -
Tan05g0544 394 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 193 256 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g0544 394 MobiDBLite consensus disorder prediction 137 167 - -
Tan05g0544 394 CDD bZIP_plant_RF2 196 245 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g0544 394 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 42 346 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Tan05g0544 394 Pfam bZIP transcription factor 195 243 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g0544 394 MobiDBLite consensus disorder prediction 13 40 - -
Tan05g0544 394 Coils Coil 211 238 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1419 Tan-Chr4:16464132 Tan05g0544 Tan-Chr5:3833222 1.60E-76 dispersed
Tan05g0544 Tan-Chr5:3833222 Tan11g1147 Tan-Chr11:9086250 1.10E-36 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27414 PF00170 bZIP_1 1.40E-08 CL0018 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0544 - - - 0.0