Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0548 ATGAAGTTCTGTTCAGCACCAGTGCTTTCTCTCTTTTTTGTTATTATTAATCTACTTCACCTTGTCATCGCGGACCTGAACTCAGACAAGCAAGCTCTTCTTGACTTCGTATCTTCTGTTCCACATCGGCGGAGCCTTAACTGGAACGATACTACATCAGTATGCACATCTTGGGTTGGCATTACTTGCAGTGCAGATGGAACCCATGTGCTTACCCTCCGACTACCTGGGATTGGACTCGTCGGTTCAATTCCTCCTAACACTCTAGGGAAACTCGATGGCCTCAAAATTCTCAGTCTTCGTTCCAACCTCCTTAGCGGAAAAATACCATTGGATATTACCTCACTTCCTTCTCTCCAATATCTTTATCTCCAACGTAATAACTTCTCTGGTGACTTTCCTTCCTCCCTTTCACCTACACTCAATGTTTTGGATCTATCATTCAATTCATTAGAAGGAAAGATTTCAAAGGCTATCCAAAATTTGACACAGTTAACTGGATTGAACCTCCAGAACAACAATCTTTCTGGTTCTATACCAGATATCAACCTCCCTAAGCTCAAGCATTTCAATATAAGTTTTAACCATCTTAATGGTTCTATCCCAACTTTTTTTAAGACATTCCCAAATTCATCCTTCATTGGAAATCCTTTATTATGTGGATTGCCTCTAAAATCTTGCTCCATAGTCCTATCTCCAGCTCCCAATGCTCCACCTTCACCAGCCATTTCTCAAAAGCAGAGCTCCAAGAAACTGAAGATGGGAGTTATCATTGCTATTGCAGTTGGTGGATTTTTCCTTCTATTCCTTGTAGTTATTTTTGTGGTTTTGTGCTGTTTAAAAAAAAAGGACGGTGGAGGCACCGGTGCAAGGAAAGGAAAAGTTGCCGGTGGTGGGAGAAGCGAAAAACCGAAAGAGGAGTTTGGAAGTGGTGTTCAGGAGCCTGAGAAAAACAAGCTGGTGTTCTTTGAAGGCTGTTCATTTAATTTTGATCTTGAAGACCTATTAAGGGCTTCAGCTGAAGTGCTTGGAAAGGGCAGCTATGGAACAGCTTATAAAGCTGTCCTGGAGGAACCTACCACTGTTGTGGTGAAAAGATTGAAGGAAGTGGTGGTGGGGAAGAGGGAGTTTGAACAGCAGATGGACATAGTGGGAAGGGTCGGGCAGCACCCGAATGTCATGCCACTCCGAGCGTATTATTACTCGAAGGATGAAAAGCTCCTTGTTTATGACTATGTCCCAGGAGGCAGCTTGTCATCACTCTTGCATGGAAACAGAGGAGGGGAAAGAACTCCCCTTGATTGGGACACAAGAGTGAAAATTGCTCTTGCAACAGCAAAGGGAATTGCGCATATTCATACAGTGGGTGGTCCAAAATTCACCCATGGAAATATCAAGGCCTCAAATGTTCTCCTAAATCAAGATGTCAATGCTTGTGTGTCTGACTTTGGCCTTACCCCTCTTATGAATGTCCCAACTTCTCGAACTGCAGGTTATCGTGCACCCGAGGTGATTGAAGCTCGCAAACACACACACAAGTCAGATGTTTATAGCTTTGGCGTTCTTCTTCTCGAAATGTTAACTGGAAAAGCTCCCCTCCAATCACCTGGTCGTGACGAAATGGTCGATCTTCCTCGGTGGGTCCAGTCGGTTGTGAGGGAGGAATGGACAGCTGAAGTTTTCGATGTTGAACTAATGAGGTACCAGAATATTGAAGAAGAGATGGTGCAGATGTTGCAAATAGCAATGACTTGTGTAGCGAAGTTGCCCGACATGAGACCGAACATGGACGAAGTAGTTAGAATGATCGAAGAAATCCGGCAATCTGACTCGGAGAACCGGCCATCTTCCGAAGAGAACAAATCCAAGGACTCAAATGTGCAGACCCCATGA 1893 44.11 MKFCSAPVLSLFFVIINLLHLVIADLNSDKQALLDFVSSVPHRRSLNWNDTTSVCTSWVGITCSADGTHVLTLRLPGIGLVGSIPPNTLGKLDGLKILSLRSNLLSGKIPLDITSLPSLQYLYLQRNNFSGDFPSSLSPTLNVLDLSFNSLEGKISKAIQNLTQLTGLNLQNNNLSGSIPDINLPKLKHFNISFNHLNGSIPTFFKTFPNSSFIGNPLLCGLPLKSCSIVLSPAPNAPPSPAISQKQSSKKLKMGVIIAIAVGGFFLLFLVVIFVVLCCLKKKDGGGTGARKGKVAGGGRSEKPKEEFGSGVQEPEKNKLVFFEGCSFNFDLEDLLRASAEVLGKGSYGTAYKAVLEEPTTVVVKRLKEVVVGKREFEQQMDIVGRVGQHPNVMPLRAYYYSKDEKLLVYDYVPGGSLSSLLHGNRGGERTPLDWDTRVKIALATAKGIAHIHTVGGPKFTHGNIKASNVLLNQDVNACVSDFGLTPLMNVPTSRTAGYRAPEVIEARKHTHKSDVYSFGVLLLEMLTGKAPLQSPGRDEMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMTCVAKLPDMRPNMDEVVRMIEEIRQSDSENRPSSEENKSKDSNVQTP 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3907605 3912672 + Tan0001465.1 Tan05g0548 751856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0548 630 ProSiteProfiles Protein kinase domain profile. 337 630 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0548 630 CDD STKc_IRAK 343 606 - -
Tan05g0548 630 Gene3D Ribonuclease Inhibitor 183 228 IPR032675 -
Tan05g0548 630 SUPERFAMILY L domain-like 39 226 - -
Tan05g0548 630 Gene3D Ribonuclease Inhibitor 26 182 IPR032675 -
Tan05g0548 630 MobiDBLite consensus disorder prediction 285 310 - -
Tan05g0548 630 Pfam Leucine Rich Repeat 165 181 IPR001611 GO:0005515(InterPro)
Tan05g0548 630 Pfam Leucine Rich Repeat 141 162 IPR001611 GO:0005515(InterPro)
Tan05g0548 630 Pfam Leucine Rich Repeat 186 207 IPR001611 GO:0005515(InterPro)
Tan05g0548 630 FunFam pollen receptor-like kinase 1 305 412 - -
Tan05g0548 630 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Tan05g0548 630 MobiDBLite consensus disorder prediction 606 630 - -
Tan05g0548 630 PANTHER OS05G0588300 PROTEIN 14 620 IPR050994 -
Tan05g0548 630 Gene3D Phosphorylase Kinase; domain 1 305 412 - -
Tan05g0548 630 FunFam Leucine-rich repeat receptor-like protein kinase 28 138 - -
Tan05g0548 630 Pfam Protein kinase domain 341 601 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0548 630 MobiDBLite consensus disorder prediction 296 310 - -
Tan05g0548 630 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 413 618 - -
Tan05g0548 630 SUPERFAMILY Protein kinase-like (PK-like) 341 604 IPR011009 -
Tan05g0548 630 Gene3D Transferase(Phosphotransferase) domain 1 413 629 - -
Tan05g0548 630 MobiDBLite consensus disorder prediction 606 621 - -
Tan05g0548 630 ProSitePatterns Protein kinases ATP-binding region signature. 343 374 IPR017441 GO:0005524(InterPro)
Tan05g0548 630 FunFam Leucine-rich repeat receptor-like protein kinase 139 227 - -
Tan05g0548 630 Pfam Leucine rich repeat 82 129 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0696 Tan-Chr3:62500606 Tan05g0548 Tan-Chr5:3907605 1.30E-196 dispersed
Tan03g0697 Tan-Chr3:62500606 Tan05g0548 Tan-Chr5:3907605 1.30E-196 dispersed
Tan05g0548 Tan-Chr5:3907605 Tan08g0198 Tan-Chr8:1771376 1.50E-144 dispersed
Tan11g0109 Tan-Chr11:1163367 Tan05g0548 Tan-Chr5:3907605 5.50E-49 dispersed
Tan05g0548 Tan-Chr5:3907605 Tan05g0549 Tan-Chr5:3907822 5.90E-306 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67575 PF00069 Pkinase 2.40E-37 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0548 - - - 0.0