Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0569 ATGTTAGGTTACAGGACGCCAATGTCGCCAATTTCTCAATTTTTAATCCTTTTCTCCTTCTTCTTCTTCTCCTCCTCCTTCCTCTCTGTCCACATTGCATTCGGCGACGACACCAAAAATGATCAACAAGAAGAGACCGTGAAGCTCGATCTGATGCACCGCCACCATCCACAAGTCGTCGAGAAGCTTCACGGCGATATGAAATTTGAAGCAATTTCCGATCGCATGAAGGATATTCACGATCACGATCAAAAGCGCCACCGTAAGATCTCGATGTCGCTGGAGCGCAATGCAACTGAGATAAGAATGAAGTCAGAGACGGCGGAGCCAGAGCCGGAGCCGGAGCCAGAGCCAGAGCCAGTGCCAGTGCCAGTGCCAGTGCCAGTGCCAGTGCCAGAGCCAGAGCCAGAGCCAGAGTCAGAGTCGGAGACAGGTTCGGTCCTTCCTCCGCCGTCGCCGACGCCGATAGGGCTGAAAATGATCTCAGGATCGGATTTCGGAAGTAGTGAGTATTTCGTGCAATTGAAAGTCGGAACGCCGCCGAAGACGTTCATGTTCATCGCCGATACCGGAAGTGACCTAACGTGGGTGAAATGTAGATACCGGCGATGCCTCGGAAATTGCAGCAGCAATCCGAGCCATAAGATCCGTAACGAGAAGAAAGAGAAATTCGCATTTTCGTTTTTTGCGAATCAGTCATCTTCTTTCAAGACAATCGATTGCAGCTCGAAGATGTGTTTTGAAGATCTTTCCGGTCTCTTCTCCGTCAAGGAATGCCGAACTCCAACCAGTCCTTGTCGCTATGATTACATGTACACAGGTGGAGCAAGTGCAAGGGGAATATTCGCAAGCGAGACGCTGACGGTAAACCTAACAAACGGAACAGAAAAACAACTTAAAGACAGTGTTATCGGTTGCACAGAATCAACGGACGGCAAAGCCTTTAAGGGAGTTGACGGCGTCATTGGTTTAGGCACTAATTTCTTCTCCTTCACTTACAAAGCCGCCCAAAACGCCTACGGCGGCGGCTTCTCCTACTGCCTCGTCGACCACCTCAGCGACCGCACCGCCACCAGTTACTTCGTCCTCGGCAGTCCTACTCCCAAAGCGTCCGCCGCCGCCTCCGCCGCCGCCCTCACCGGCAACACCACCTTCACCAAACTCCTCATCGGCGGCCCCTACAACAACTTCTACGGCGTCGATCTGGTCCGAATCTCCGCCGACGGCGTCACGATCGACATCCCCCCTCGCGTCTGGAACATCCGAAACGGCGGCGGTACCATCATCGACTCCGGCACCAGCCTCACCATTCTCACCGCTCCGGCATACGACATGGTCATGGAAGTCCTCACTCCCAAACTCAAACAATTCGAAAGAGTCGAACTCCAACCCTTCGAATTTTGCTTCAATAATACCAATTTCAATTACGAACAAAACAACGTCCCCCAGCTTCGCTTCCATTTCGGCGATGGCGCCGTCTTCGCACCGCCGCTCAAGAGCTACATTATTCCCGTCGGTGATAATATCAGTTGCATTGGCTTGATTTCCATCCCTTTTCCGGGCATCTCTATCATCGGCAATATTCTTCAGCAAAATCATCTTTGGCAATTTTATTTCTATAAGGGCGTTCTCAGTTATGCTCCTTCCGAATGCGTCTAG 1659 51.6 MLGYRTPMSPISQFLILFSFFFFSSSFLSVHIAFGDDTKNDQQEETVKLDLMHRHHPQVVEKLHGDMKFEAISDRMKDIHDHDQKRHRKISMSLERNATEIRMKSETAEPEPEPEPEPEPVPVPVPVPVPVPEPEPEPESESETGSVLPPPSPTPIGLKMISGSDFGSSEYFVQLKVGTPPKTFMFIADTGSDLTWVKCRYRRCLGNCSSNPSHKIRNEKKEKFAFSFFANQSSSFKTIDCSSKMCFEDLSGLFSVKECRTPTSPCRYDYMYTGGASARGIFASETLTVNLTNGTEKQLKDSVIGCTESTDGKAFKGVDGVIGLGTNFFSFTYKAAQNAYGGGFSYCLVDHLSDRTATSYFVLGSPTPKASAAASAAALTGNTTFTKLLIGGPYNNFYGVDLVRISADGVTIDIPPRVWNIRNGGGTIIDSGTSLTILTAPAYDMVMEVLTPKLKQFERVELQPFEFCFNNTNFNYEQNNVPQLRFHFGDGAVFAPPLKSYIIPVGDNISCIGLISIPFPGISIIGNILQQNHLWQFYFYKGVLSYAPSECV 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4047800 4050721 + Tan0006219.1 Tan05g0569 751877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0569 552 CDD pepsin_A_like_plant 170 551 IPR034161 -
Tan05g0569 552 Gene3D Acid Proteases 370 552 IPR021109 -
Tan05g0569 552 PANTHER OS07G0603500 PROTEIN-RELATED 28 548 IPR051708 -
Tan05g0569 552 Gene3D Acid Proteases 152 364 IPR021109 -
Tan05g0569 552 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 186 197 IPR001969 GO:0004190(InterPro)|GO:0006508(InterPro)
Tan05g0569 552 MobiDBLite consensus disorder prediction 117 135 - -
Tan05g0569 552 MobiDBLite consensus disorder prediction 80 160 - -
Tan05g0569 552 PRINTS Pepsin (A1) aspartic protease family signature 427 438 IPR001461 GO:0004190(InterPro)|GO:0006508(InterPro)
Tan05g0569 552 PRINTS Pepsin (A1) aspartic protease family signature 177 197 IPR001461 GO:0004190(InterPro)|GO:0006508(InterPro)
Tan05g0569 552 ProSiteProfiles Peptidase family A1 domain profile. 171 547 IPR033121 -
Tan05g0569 552 MobiDBLite consensus disorder prediction 80 111 - -
Tan05g0569 552 Pfam Xylanase inhibitor C-terminal 398 547 IPR032799 -
Tan05g0569 552 FunFam Aspartyl protease family protein 380 552 - -
Tan05g0569 552 Pfam Xylanase inhibitor N-terminal 171 365 IPR032861 -
Tan05g0569 552 SUPERFAMILY Acid proteases 163 551 IPR021109 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0569 Tan-Chr5:4047800 Tan11g1948 Tan-Chr11:31724062 4.40E-55 dispersed
Tan05g0569 Tan-Chr5:4047800 Tan06g1744 Tan-Chr6:35073820 1.20E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0569 - - - 0.0