Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g0577 | ATGTTCCATGCCACCAAGAAACCTTCCTCTATGAGTTCCCATGAAAGGCCAATGTGTGTCCAAGGAGATTCCGGTCTCGTCCTCACCACCGACCCGAAGCCCCGCCTCCGCTGGACCGTCGAGCTCCACGATCGCTTCGTCGACGCTGTCACTCAGCTCGGAGGACCCGACAAGGCCACTCCCAAGACCATCATGAGGGTTATGGGCGTCAAGGGCCTCACTCTCTACCATCTCAAGAGCCACCTTCAGAAGTTCAGACTCGGAAAGCAACCTCACAAGGAATTCAATGATCAAGCAATAAAGGATGGTATGAGAGCTTCAGCCTTAGAACTTCAGAGGAACAGTGGATCTTCCTCCACCTTAATGGACCGTAGTATGAACGAAATGCAAATGGAGGTCCAGAGACGACTTCATGAACAAATTGAGGTACAAAGACATCTCCAATTGAGGATTGAGGCTCAAGGCAAATACATGCAAAGCATATTGGAGAAAGCTTGCCAAACCCTCGCCGGTGAAAACATGTCCGCCGCCACTGCCGCCGCCACCGGACCTTTCAAAACCACTTCCAACAATATTGGAACAACCACCAATCTTGTTTCAGACGCCGCCATCAAAGACTTCATTTCACCTCCTCCACCTCACTCCTTCCCTCCTTTTCAAGACATCAACAACGTCCTATTTACCTCCGAAGCGCCGCCACCGCCGCCTCTCATCGACTGCCTGAAGAAGCCCAGCCCCTTCATCTCCGGTGCCGGTAAGAACCCCATTTTCTGGCCGGACGATCTCCGGCTCCAGGATTTAGGAACCCCTCCAGCAACCCTAGCTCCACCGCCGCCATCCATCGGCGGCCCGGCTGACTTGGATACTCTTCAGCTGGAAATGTATGAAACTAAACCGCCGCCACCGCAACCGTTACTCGCCGTTGGCAACGATACAATGAATGAGAAGAAGTTCGACGTGTCGTTAAAGCTCGAGAGGCCGTCGCCGCGACATTCGTCGGGACATTCTGATGAGAGGGTGAACAATGGTATGCCTAACAATAATAACCCTACTACAATGTCACAGCCTCAGGGAAGAAATTCTTCATTTGGTTGA | 1095 | 52.24 | MFHATKKPSSMSSHERPMCVQGDSGLVLTTDPKPRLRWTVELHDRFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDQAIKDGMRASALELQRNSGSSSTLMDRSMNEMQMEVQRRLHEQIEVQRHLQLRIEAQGKYMQSILEKACQTLAGENMSAATAAATGPFKTTSNNIGTTTNLVSDAAIKDFISPPPPHSFPPFQDINNVLFTSEAPPPPPLIDCLKKPSPFISGAGKNPIFWPDDLRLQDLGTPPATLAPPPPSIGGPADLDTLQLEMYETKPPPPQPLLAVGNDTMNEKKFDVSLKLERPSPRHSSGHSDERVNNGMPNNNNPTTMSQPQGRNSSFG | 364 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4195205 | 4198795 | - | Tan0006387.1 | Tan05g0577 | 751885 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g0577 | 364 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Tan05g0577 | 364 | SUPERFAMILY | Homeodomain-like | 32 | 88 | IPR009057 | - | |
Tan05g0577 | 364 | MobiDBLite | consensus disorder prediction | 298 | 364 | - | - | |
Tan05g0577 | 364 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 33 | 88 | IPR006447 | GO:0003677(InterPro) | |
Tan05g0577 | 364 | Gene3D | - | 32 | 90 | - | - | |
Tan05g0577 | 364 | Pfam | MYB-CC type transfactor, LHEQLE motif | 129 | 168 | IPR025756 | - | |
Tan05g0577 | 364 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 9 | 187 | IPR046955 | GO:0003700(InterPro) | |
Tan05g0577 | 364 | MobiDBLite | consensus disorder prediction | 316 | 337 | - | - | |
Tan05g0577 | 364 | FunFam | Myb family transcription factor | 32 | 90 | - | - | |
Tan05g0577 | 364 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Tan05g0577 | 364 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 30 | 90 | IPR017930 | - | |
Tan05g0577 | 364 | Pfam | Myb-like DNA-binding domain | 35 | 85 | IPR001005 | - | |
Tan05g0577 | 364 | MobiDBLite | consensus disorder prediction | 338 | 364 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g0015 | Tan-Chr2:571209 | Tan05g0577 | Tan-Chr5:4195205 | 1.60E-82 | dispersed | |
Tan02g0016 | Tan-Chr2:571209 | Tan05g0577 | Tan-Chr5:4195205 | 3.70E-53 | dispersed | |
Tan05g0577 | Tan-Chr5:4195205 | Tan10g0520 | Tan-Chr10:4152978 | 1.50E-40 | dispersed | |
Tan05g0577 | Tan-Chr5:4195205 | Tan05g0578 | Tan-Chr5:4195205 | 5.70E-136 | tandem | |
Tan07g2044 | Tan-Chr7:71999665 | Tan05g0577 | Tan-Chr5:4195205 | 1.30E-29 | transposed | |
Tan07g2179 | Tan-Chr7:73328062 | Tan05g0577 | Tan-Chr5:4195205 | 2.10E-22 | transposed | |
Tan08g1372 | Tan-Chr8:54544996 | Tan05g0577 | Tan-Chr5:4195205 | 6.90E-26 | transposed | |
Tan02g0014 | Tan-Chr2:571209 | Tan05g0577 | Tan-Chr5:4195205 | 5.90E-85 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27418 | PF00249 | Myb_DNA-binding | 4.30E-06 | CL0123 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g0577 | - | - | - | 0.0 |