Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan05g0578 | ATGAGAGCTTCAGCCTTAGAACTTCAGAGGAACAGTGGATCTTCCTCCACCTTAATGGACCGTAGTATGAACGAAATGCAAATGGAGGTCCAGAGACGACTTCATGAACAAATTGAGGTACAAAGACATCTCCAATTGAGGATTGAGGCTCAAGGCAAATACATGCAAAGCATATTGGAGAAAGCTTGCCAAACCCTCGCCGGTGAAAACATGTCCGCCGCCACTGCCGCCGCCACCGGACCTTTCAAAACCACTTCCAACAATATTGGAACAACCACCAATCTTGTTTCAGACGCCGCCATCAAAGACTTCATTTCACCTCCTCCACCTCACTCCTTCCCTCCTTTTCAAGACATCAACAACGTCCTATTTACCTCCGAAGCGCCGCCACCGCCGCCTCTCATCGACTGCCTGAAGAAGCCCAGCCCCTTCATCTCCGGTGCCGGTAAGAACCCCATTTTCTGGCCGGACGATCTCCGGCTCCAGGATTTAGGAACCCCTCCAGCAACCCTAGCTCCACCGCCGCCATCCATCGGCGGCCCGGCTGACTTGGATACTCTTCAGCTGGAAATGTATGAAACTAAACCGCCGCCACCGCAACCGTTACTCGCCGTTGGCAACGATACAATGAATGAGAAGAAGTTCGACGTGTCGTTAAAGCTCGAGAGGCCGTCGCCGCGACATTCGTCGGGACATTCTGATGAGAGGGTGAACAATGGTATGCCTAACAATAATAACCCTACTACAATGTCACAGCCTCAGGGAAGAAATTCTTCATTTGGTTGA | 786 | 51.27 | MRASALELQRNSGSSSTLMDRSMNEMQMEVQRRLHEQIEVQRHLQLRIEAQGKYMQSILEKACQTLAGENMSAATAAATGPFKTTSNNIGTTTNLVSDAAIKDFISPPPPHSFPPFQDINNVLFTSEAPPPPPLIDCLKKPSPFISGAGKNPIFWPDDLRLQDLGTPPATLAPPPPSIGGPADLDTLQLEMYETKPPPPQPLLAVGNDTMNEKKFDVSLKLERPSPRHSSGHSDERVNNGMPNNNNPTTMSQPQGRNSSFG | 261 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 4195205 | 4198795 | - | Tan0006387.2 | Tan05g0578 | 751886 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan05g0578 | 261 | MobiDBLite | consensus disorder prediction | 235 | 261 | - | - | |
| Tan05g0578 | 261 | MobiDBLite | consensus disorder prediction | 195 | 261 | - | - | |
| Tan05g0578 | 261 | MobiDBLite | consensus disorder prediction | 213 | 234 | - | - | |
| Tan05g0578 | 261 | Pfam | MYB-CC type transfactor, LHEQLE motif | 26 | 65 | IPR025756 | - | |
| Tan05g0578 | 261 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 4 | 91 | IPR046955 | GO:0003700(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan05g0577 | Tan-Chr5:4195205 | Tan05g0578 | Tan-Chr5:4195205 | 5.70E-136 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan05g0578 | - | - | - | 0.0 |