Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0579 ATGACTATGATCGTCGCTGCAAGAGCAATCGCAACAACTCGATCAGTGGTGCGATTGAGCAGGCTCCCTCTTCTATCCCCATCTTCTTACGTTTTTGCCGCGCAGAAATCTCACTCTCACACTCTTCTCATTCGTCAGATGAGCTCGGAGGCGCAGAGTATCGCTGCTCGTCTTCACAGTTCTGGATTGTTACGAAGCCAAGGCCTCATTGGCGGGAAGTGGATCGATGCTTATGATGGGAAGACCATTAAGGTTCATAATCCAGCCAATGGTGAAGTTATAACCGATGTCCCGCTCATGGGCAAAAGGGAGACCGATGATGCTATTTCTTCAGCTTATGATGCTTTTAAGTCTTGGAGCAAGCTCACTGCAGCTGATCGGAGTAATCGCTTACGTAAATGGTATGAGCTCCTAATTGCCCACAAAGAAGAGATTGGACAGCTGATAACCTTAGAGCAAGGCAAACCATTAAAGGAAGCAGTGGGTGAGATTAACTATGGAGCCAGCTTTATTGAATTCTTTTCTGAGGAAGCAAAACGAGTATATGGCGACATAATCTCACCAACTATAGCTGATCGTCGACTTTTTGTTTTGAAGCAGCCAGTTGGAGTTGTTGGTATTATTACTCCTTGGAACTTTCCGTTGGCTATGATTACACGGAAGGTTGGACCTGCTCTTGCATGTGGTTGTACGGTAGTCATAAAACCCTCTGAACTTACCCCCTTGACAGCTTTAGCAGCAGCCGAGCTCTCACTTCAAGCTGGAATCCCCCCAGGTGTAGTGAATGTGGTAATGGGAGATGCTCCTGCTATTGGGGATGCTATACTTGCAAGTTCCCAGGTAAGAAAAATCACGTTTACTGGCTCAACAGCAGTTGGGAAAAAATTGATGGCCGGAGCTGCTGGGACTGTTAAAAGGGTGTCCTTTGAACTTGGTGGTAATGCACCGTGCATAGTCTTTGATGACGCAGATGTGGATGTTGCTGTAAAAGGAGCTATTGCTGCGAAGTTTCGAAATAGTGGGCAGACTTGTGTCTGTGCCAATAGAATTCTTGTTCAAGAAGGTATATACGAGAAATTTTCAAATGCTTTCTCAAAAGCTGTGCAAAATCTGCAAGTTGGTGATGGGTTTAGTGAAGGTGTAGCTCAGGGTCCTTTAATTAATGAAGCTGCCGTGCAGAAGGTTGAGAAATTTCTTCAAGATGCCATCACAAAGGGAGCAAAAGTTCTTCTTGGTGGTAAAAGACACAGCCTCGGGATGACATTTTTTGAACCTACAGTCGTTACTGACGTGAAGAGTGATATGCTTTTATCCAGGGAGGAAGTATTCGGTCCCGTGGCACCCTTACTGCCATTCAAAACAGAGGAGGAAGCAATTGCTCTCGCTAATGACACCAATGCAGGATTAGCTGCTTACATATTCACAAATAATATTCAACGTTCATGGAGAGTGACTGAAGCTCTTGAATATGGAATGGTTGGTGTTAATGAAGGCCTAATTTCTACAGAGGTGGCTCCATTTGGTGGCGTTAAACAGTCAGGCCTTGGTCGGGAAGGGTCGAAATATGGGATGGACGAGTATCTTGAGCTGAAATATGTCTGTTTGGGAAATATGGGCCAAAACTGA 1626 45.14 MTMIVAARAIATTRSVVRLSRLPLLSPSSYVFAAQKSHSHTLLIRQMSSEAQSIAARLHSSGLLRSQGLIGGKWIDAYDGKTIKVHNPANGEVITDVPLMGKRETDDAISSAYDAFKSWSKLTAADRSNRLRKWYELLIAHKEEIGQLITLEQGKPLKEAVGEINYGASFIEFFSEEAKRVYGDIISPTIADRRLFVLKQPVGVVGIITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGDAPAIGDAILASSQVRKITFTGSTAVGKKLMAGAAGTVKRVSFELGGNAPCIVFDDADVDVAVKGAIAAKFRNSGQTCVCANRILVQEGIYEKFSNAFSKAVQNLQVGDGFSEGVAQGPLINEAAVQKVEKFLQDAITKGAKVLLGGKRHSLGMTFFEPTVVTDVKSDMLLSREEVFGPVAPLLPFKTEEEAIALANDTNAGLAAYIFTNNIQRSWRVTEALEYGMVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLELKYVCLGNMGQN 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4204377 4219778 - Tan0015241.1 Tan05g0579 751887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0579 541 Pfam Aldehyde dehydrogenase family 74 533 IPR015590 GO:0016491(InterPro)
Tan05g0579 541 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 309 316 IPR029510 GO:0016491(InterPro)
Tan05g0579 541 NCBIfam succinate-semialdehyde dehydrogenase 85 531 IPR010102 GO:0009013(InterPro)|GO:0009450(InterPro)
Tan05g0579 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 80 527 IPR016162 GO:0016491(InterPro)
Tan05g0579 541 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 58 538 IPR050740 GO:0004777(PANTHER)|GO:0006807(PANTHER)|GO:0009450(PANTHER)
Tan05g0579 541 FunFam Succinate-semialdehyde dehydrogenase I 313 502 - -
Tan05g0579 541 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 337 348 IPR016160 GO:0016491(InterPro)
Tan05g0579 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 313 502 IPR016163 GO:0016620(InterPro)
Tan05g0579 541 SUPERFAMILY ALDH-like 46 536 IPR016161 GO:0016491(InterPro)
Tan05g0579 541 FunFam Aldehyde dehydrogenase, putative 505 531 - -
Tan05g0579 541 CDD ALDH_F5_SSADH_GabD 85 535 - -
Tan05g0579 541 FunFam Succinate-semialdehyde dehydrogenase I 80 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0579 Tan-Chr5:4204377 Tan09g1303 Tan-Chr9:65254879 3.00E-93 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0579 K17761 - csv:101217352 957.207