Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0596 ATGCTATCTTTGAAATTTGGGTCAAAATGGTTTACGGTTGTTGCCCCCAAACCAGTCGTTGGAAGTCGAAAACACTCGAGAAATCTATGGCGCGTTTCTAATCGTATTCAGTCAAATGGCTTATCTTCTAAATATCAGACTGGTTCCTCTTCACCGTCGTCGTCGAAAGATTTAGAAGGACTGGAGGATGTCATGGTCGGCTACATTTTTGGAAAGAAGAGAGCGACAGAAGTTGCTCACTCTGTATGGAAACGTGTCATCAGAAAAGGGGATACTATGGTAGATGCTACTTGTGGAAATGGGTATGATACTCTAGCTATGGTCAAAATGGTTGCCGATGAATCTGGTTCTGCTTGTGTTTATGCAATGGATGTTCAGAAAGAGGCTTTAGAAAGTACTTCTGCTCTGCTGAAAGAATCACTCAATGAAAAAGAGAAGAAACTTGTTAAACTCTATTCCATTTGCCACAGCAGAATGGAGGATGTCATTCCAGAGGGTTCTTCCGTTAGGCTTGTTGCATTTAATCTAGGTTACCTACCTGGTGGTAACAAAGCAATAGCTACAAAACCAGAAACAACATTACAAGCACTTGAAGCTGCCAATAGAATTCTAAAACCTGGAGGGCTTATCAGCCTTGTGGTTTATGTGGGGCATCCTGGTGGAGTGTAA 669 42.0 MLSLKFGSKWFTVVAPKPVVGSRKHSRNLWRVSNRIQSNGLSSKYQTGSSSPSSSKDLEGLEDVMVGYIFGKKRATEVAHSVWKRVIRKGDTMVDATCGNGYDTLAMVKMVADESGSACVYAMDVQKEALESTSALLKESLNEKEKKLVKLYSICHSRMEDVIPEGSSVRLVAFNLGYLPGGNKAIATKPETTLQALEAANRILKPGGLISLVVYVGHPGGV 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4306281 4308817 + Tan0014507.3 Tan05g0596 751904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0596 222 Gene3D Vaccinia Virus protein VP39 72 222 IPR029063 -
Tan05g0596 222 Pfam Putative rRNA methylase 120 221 IPR010719 -
Tan05g0596 222 CDD AdoMet_MTases 92 217 - -
Tan05g0596 222 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 86 219 IPR029063 -
Tan05g0596 222 Coils Coil 127 147 - -
Tan05g0596 222 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 38 221 IPR010719 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0594 Tan-Chr5:4306281 Tan05g0596 Tan-Chr5:4306281 2.80E-121 dispersed
Tan05g0595 Tan-Chr5:4306281 Tan05g0596 Tan-Chr5:4306281 9.40E-85 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0596 - - - 0.0