Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0601 ATGCCTATGGCAACCGCACCCTTGAACAAAATCGAGCGAGCCCATCAGATGTATCGCGAGGGGCTCTATGTCGAAGCCCTTAGATTCTACACTGAAGCGCTTTCCATGGCGAAAACCAAGTCCCAGAGGATTGCGCTCCATAGTAATAGGGCTGCTTGTCACTTGAAACTTCATGATTTTAAGAAGGCAGCAGAAGAATGCACGTGGGTTCTTGAACTTGATCATAAGCACACTGGAGCGCTAATGCTCCGAGCCCAGACTCTTGTCACACTCAAGGAATACCATTCTGCTCTGTTTGATGTCAACAGACTTATAGAACTGAACCCATCATCAGAAGTTTATCAAAATCTTCAATCTCGTCTCAAGACGCAATTGTCACTTGCTCCAATACCCGAATCAGAAGCAGAGCTAGAGGAAGAGGAGGAGGAGGAAGAAGAATATGAGGTTGAGTTCAATGCATATGCAGCTAATGATAAGTGCAATGAGGGAAAAGAAAATGTTGTAGCTCCAAGTATTGAGCAAATACAGAAACCTGAGCTCAATTGCAATTTGACCAAAAATACTGAAGAAGGTGGCAATCAGAAAGCTGAGGTCAAAATGACTGCTAAAAGTGAAGTAGTTGTCCCTCAAGTACAGAGCAAGAAGGGCACAACTGACCTAGATCCTAAGGGCTGGCAAACAATTCCAAAACCAAAAGGACATTCAACTTTAGATTATGCACGTTGGGATAGAGTTGAGGATGATTCTAGTGAAGATGATGATGATGATGAAGAAGAAGAGTCTGGACCTCAATTTCGTTTTCGTGTCAGAACCGTTGGCGTTAAACCCGTGAAATGA 837 43.61 MPMATAPLNKIERAHQMYREGLYVEALRFYTEALSMAKTKSQRIALHSNRAACHLKLHDFKKAAEECTWVLELDHKHTGALMLRAQTLVTLKEYHSALFDVNRLIELNPSSEVYQNLQSRLKTQLSLAPIPESEAELEEEEEEEEEYEVEFNAYAANDKCNEGKENVVAPSIEQIQKPELNCNLTKNTEEGGNQKAEVKMTAKSEVVVPQVQSKKGTTDLDPKGWQTIPKPKGHSTLDYARWDRVEDDSSEDDDDDEEEESGPQFRFRVRTVGVKPVK 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4406422 4408970 + Tan0021682.1 Tan05g0601 751909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0601 278 SUPERFAMILY TPR-like 11 122 IPR011990 GO:0005515(InterPro)
Tan05g0601 278 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 3 278 - -
Tan05g0601 278 Coils Coil 130 157 - -
Tan05g0601 278 Gene3D Tetratricopeptide repeat domain 3 128 IPR011990 GO:0005515(InterPro)
Tan05g0601 278 SMART tpr_5 44 77 IPR019734 GO:0005515(InterPro)
Tan05g0601 278 SMART tpr_5 78 111 IPR019734 GO:0005515(InterPro)
Tan05g0601 278 SMART tpr_5 7 40 IPR019734 GO:0005515(InterPro)
Tan05g0601 278 MobiDBLite consensus disorder prediction 210 278 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0601 - - - 0.0