Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan05g0605 | ATGTCGCAGAGCAATGGGCCTGATTTTAATCTATCGGATGAGATTCTGGCGGTGATTCCAACGAATCCATACGATCAGCTCGATCTTGCGCGTAAAATTACCTCCATGGCGATAGCATCACGTGTGTCGAATCTTGAAGCTGATGTGGTAAGGATGAAGCAGAAGCTTAAAGAGAAGGAAAAAACCATCTACGACCTGCAGGAGAAGTTCTCTCACCTCGAGCACGCGAACCAGGAAGCTGAGTCTAGGTTGAAGATTGCGCTTGATGATAATATGAGGCTTTCAAGGGAACGGGATTCACTATCAATGACTTCAAAGAAGCTTGGACGTGATTTGGCAAAGCTGGAGACATTTAAGAGACAACTTATGCTATCATTGAGTGATGAATCCTCTCAAACGGAAACTGTTGATATTGGGACCTGTGATCAAGCAATTCCTAAAGCATATACTGTAAAGGATGAAGTAACAAATGGACGCGCCACACATTCTTTCAGTGGTTCTACAGAGACGAAAAACACAATAGATGAAGGAAAACATACTGGACAAAGATATTCATCGCCATATATCACCCCAAGGCTCACTCCATCTGCAACTCCAAAAATTATTTCAACAAGTGTATCCCCCAGAGGGTATTCCACTGTTGCTTCTCCACAGATAACGTCTGGTTCAACTTCTCCAACAAAACCCTCTTATGATGGACGGATTGCACTATCCCCGTGGTACCCGTCAAGCCAGCAGTCCTCAGCAGCAAGTTCTCCTCCTCGTTCTCGTCAACTGGCTGGTAAAAGAAAGCTTTTTCTTTTTCTCTTGAAGATTTGA | 819 | 43.96 | MSQSNGPDFNLSDEILAVIPTNPYDQLDLARKITSMAIASRVSNLEADVVRMKQKLKEKEKTIYDLQEKFSHLEHANQEAESRLKIALDDNMRLSRERDSLSMTSKKLGRDLAKLETFKRQLMLSLSDESSQTETVDIGTCDQAIPKAYTVKDEVTNGRATHSFSGSTETKNTIDEGKHTGQRYSSPYITPRLTPSATPKIISTSVSPRGYSTVASPQITSGSTSPTKPSYDGRIALSPWYPSSQQSSAASSPPRSRQLAGKRKLFLFLLKI | 272 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 4422876 | 4426018 | + | Tan0020086.3 | Tan05g0605 | 751913 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan05g0605 | 272 | MobiDBLite | consensus disorder prediction | 179 | 231 | - | - | |
| Tan05g0605 | 272 | MobiDBLite | consensus disorder prediction | 239 | 255 | - | - | |
| Tan05g0605 | 272 | MobiDBLite | consensus disorder prediction | 159 | 259 | - | - | |
| Tan05g0605 | 272 | Coils | Coil | 42 | 97 | - | - | |
| Tan05g0605 | 272 | PANTHER | OS03G0659800 PROTEIN | 1 | 262 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan05g0603 | Tan-Chr5:4422876 | Tan05g0605 | Tan-Chr5:4422876 | 1.10E-130 | dispersed | |
| Tan05g0605 | Tan-Chr5:4422876 | Tan07g0003 | Tan-Chr7:887482 | 9.70E-40 | dispersed | |
| Tan05g0604 | Tan-Chr5:4422876 | Tan05g0605 | Tan-Chr5:4422876 | 1.10E-130 | tandem | |
| Tan05g0605 | Tan-Chr5:4422876 | Tan05g0606 | Tan-Chr5:4422876 | 3.80E-137 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan05g0605 | - | - | - | 0.0 |