Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0624 ATGGCTGCTTCATCCATGGCTCTGTCTTCCCCATCTCTCGCCGGCCAAGCCGTGAAATTATCCCCCGCCGCCTCCGACCTCCTCGGCGACGGCCGTGTCACCATGAGGAAAACCGCCGGCAGGCCCAAGCCCGTTTCCTCTGGAAGCCCATGGTACGGCCCAGATCGCGTCAAATATTTGGGCCCATTCTCCGGTGAGCCCCCGTCCTATCTCACCGGCGAATTCCCCGGCGACTACGGTTGGGACACCGCCGGCCTGTCCGCCGACCCGGAAACCTTCGCCAAAAACCGCGAGCTGGAAGTGATCCACTCGAGATGGGCCATGCTTGGGGCGCTTGGCTGCGTGTTCCCGGAGCTGCTCTCCCGCAACGGCGTGAAATTCGGCGAAGCCGTCTGGTTTAAAGCCGGATCGCAGATCTTCAGCGAAGGTGGGCTGGACTATTTGGGAAACCCGAGCCTGGTCCACGCGCAGAGCATTTTGGCGATCTGGGCTTGCCAAGTTGTGCTGATGGGAGCCGTTGAGGGATACAGAATTGCCGGCGGGCCGCTGGGTGAGATCAGTGATCCAATTTACCCAGGCGGGAGCTTCGACCCATTGGGGCTGGCCGATGACCCAGAGGCATTCGCGGAGCTTAAAGTGAAGGAGCTCAAAAATGGGCGATTGGCTATGTTCTCCATGTTTGGATTCTTTGTACAGGCCATTGTGACTGGAAAAGGGCCTTTGGAGAACTTGGCTGATCATTTGGCTGACCCTGTTAACAACAATGCTTGGGCTTATGCCACTAACTTTGCCAGTTGTCGAATTAATGGCATTAACGACCAAGATCATTCCAATGCCCTTATCTTAACGGTGTTAGATGGCTGCCCATTTAGCTTTTTGGCCAAAATCCGACTCGACCCGACTCAAAAGCCTTTGGATTTGGAGTTTTGGGACTTGGGATTGAATTGGATTGGGAGTTCAATATCTGGACAACATTTTGGCATATCCCCCATGCTTTTTGGGTCTCCATTGGCTAAACACGATTCGCTTTATTTCCCTTTCTGGGCTCCTGGAGGAAGGGGCAAATCTGGGTCTATCTTCGATTACTACATGAGGTCCTTAATTCTTATCTCGTGCCTGAATTTCCAGATGGTGTTCAGTGGATCAGATATGGCGTCTGGGAATTCATTGAATGATCATTTATCCAAGAAGACTTCATTTTGGGGCTTGTCATTGTGGGTTTTGATCTGCATTTGCATTGGTGCATTTATAGTTTTGATTCTTGGTTTATTATCTATGTGGATCCTGTTTCGAAAAAAATCTAAAAGATCCATGGACAAATTTCCTATTTCCCAAATACCTGATTTTTCAAAAGATATCAGGATAGACCAGGTTGGGGCTCAAACTCTCAATGACCACCCTGAAAATAGACTTCTTTCGGTTGATGTCAAAAGGAATGACGAACATTCTGAAGTTATGGCTGTGACAAAATCAAGTGAACCTGATAATAATAGCCAAGGCAGTTCCACTTATCAACACGAAAAAACAGGCAATTCACAATCAGGGGAAGAAGGAAGCTCTGGAAATGCTCGGAAGCAAGCTTCGAGATCGTATGGAGGATATGGAGGAATTGTGCCACCGTCTCCTCTCGTTGGCTTGCCAGAAATTTCACATCTTGGGTGGGGCCACTGGTTCACTCTCAGGGATCTAGAGCTTGCAACTAATCGTTTTTCTTCTGAAAATATTCTTGGAGAGGGGGGATATGGGGTTGTATATAAGGGCAGACTCATCAATGGCACTGAGGTTGCGGTGAAGAAACTTCTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGTTGAAGTGGAGGCTATTGGCCATGTTCGACATAAGAATCTTGTTCGACTGCTGGGGTATTGCATAGAAGGAGTTCATAGGATGCTAGTATATGAATATGTGAACAATGGCAATCTAGAACAATGGCTACATGGAGCCATGTGCCAACATGGCACGCTTACTTGGGAGGCTCGCATGAAGGTGCTTCTTGGCACTGCTAAGGCGCTAGCGTATTTACACGAAGCAATTGAACCAAAAGTTGTTCACAGAGATATAAAATCAAGCAACATTTTGATTGATGATGAGTTCAATGCCAAAGTTTCTGATTTCGGATTGGCCAAACTCTTAGGCTCTGGGGAGAGTCACATCACAACTAGAGTTATGGGAACATTTGGGTATGTGGCACCAGAATATGCAAATACAGGCTTGTTGAACGAAAAGAGTGACATTTATAGCTTTGGTGTTCTCCTGCTAGAAGCAATTACAGGGAGGGACCCTGTGGATTATGCCCGCCCTTCGAATGAGGTTAATCTTGTTGAGTGGCTGAAGATGATGGTAGCAACAAGGAGAGCAGAGGAAGTTGTGGACATGAACCTTGAGGTTAAGCCTACTACTCGTGCTTTGAAACGTGCCCTTCTTGTTGCACTTAGATGTATTGATCCTGAATCAATCAAGAGACCCAAGATGAGTCAAGTTGTAAGAATGCTTGAAGCTGATGAATTTCCACTGCACGAGGATAGAAGAACCCGAAAAAGTCGATCGATAAGCTTGGAAAGTGAGTCCGAAAGCATCGATATCTTTATCGATATGTATGAGATGATAACTTTCGACGACGAGGAAAACCCGTTGTTGCGGGATGGAGAAATTGAGGAGTAA 2691 47.45 MAASSMALSSPSLAGQAVKLSPAASDLLGDGRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEISDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFASCRINGINDQDHSNALILTVLDGCPFSFLAKIRLDPTQKPLDLEFWDLGLNWIGSSISGQHFGISPMLFGSPLAKHDSLYFPFWAPGGRGKSGSIFDYYMRSLILISCLNFQMVFSGSDMASGNSLNDHLSKKTSFWGLSLWVLICICIGAFIVLILGLLSMWILFRKKSKRSMDKFPISQIPDFSKDIRIDQVGAQTLNDHPENRLLSVDVKRNDEHSEVMAVTKSSEPDNNSQGSSTYQHEKTGNSQSGEEGSSGNARKQASRSYGGYGGIVPPSPLVGLPEISHLGWGHWFTLRDLELATNRFSSENILGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMCQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLGSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEVKPTTRALKRALLVALRCIDPESIKRPKMSQVVRMLEADEFPLHEDRRTRKSRSISLESESESIDIFIDMYEMITFDDEENPLLRDGEIEE 896
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4631506 4645679 + Tan0019186.1 Tan05g0624 751932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0624 896 ProSiteProfiles Protein kinase domain profile. 570 834 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0624 896 CDD STKc_IRAK 576 842 - -
Tan05g0624 896 SUPERFAMILY Chlorophyll a-b binding protein 50 263 - -
Tan05g0624 896 FunFam Chlorophyll a-b binding protein, chloroplastic 58 260 - -
Tan05g0624 896 ProSitePatterns Protein kinases ATP-binding region signature. 576 599 IPR017441 GO:0005524(InterPro)
Tan05g0624 896 MobiDBLite consensus disorder prediction 489 527 - -
Tan05g0624 896 Gene3D Transferase(Phosphotransferase) domain 1 646 858 - -
Tan05g0624 896 PANTHER OS01G0323000 PROTEIN 389 861 IPR052232 -
Tan05g0624 896 Pfam Protein kinase domain 571 839 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0624 896 ProSitePatterns Serine/Threonine protein kinases active-site signature. 692 704 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0624 896 SUPERFAMILY Protein kinase-like (PK-like) 554 849 IPR011009 -
Tan05g0624 896 SMART serkin_6 570 824 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0624 896 Pfam Chlorophyll A-B binding protein 67 234 IPR022796 -
Tan05g0624 896 MobiDBLite consensus disorder prediction 485 532 - -
Tan05g0624 896 FunFam Putative receptor-like serine/threonine-protein kinase 646 856 - -
Tan05g0624 896 FunFam Putative receptor-like protein kinase 552 645 - -
Tan05g0624 896 Gene3D Phosphorylase Kinase; domain 1 553 645 - -
Tan05g0624 896 Gene3D Chlorophyll a/b binding protein domain 58 260 - -
Tan05g0624 896 Coils Coil 590 610 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0077 Tan-Chr2:923557 Tan05g0624 Tan-Chr5:4631506 6.40E-218 dispersed
Tan02g0078 Tan-Chr2:923557 Tan05g0624 Tan-Chr5:4631506 6.40E-218 dispersed
Tan02g1799 Tan-Chr2:83362068 Tan05g0624 Tan-Chr5:4631506 1.10E-148 dispersed
Tan05g0624 Tan-Chr5:4631506 Tan06g2813 Tan-Chr6:80230106 2.50E-145 dispersed
Tan06g0460 Tan-Chr6:3328473 Tan05g0624 Tan-Chr5:4631506 1.80E-58 dispersed
Tan09g2110 Tan-Chr9:71467726 Tan05g0624 Tan-Chr5:4631506 6.70E-27 dispersed
Tan10g1823 Tan-Chr10:56891961 Tan05g0624 Tan-Chr5:4631506 1.80E-55 dispersed
Tan11g0846 Tan-Chr11:6949329 Tan05g0624 Tan-Chr5:4631506 3.30E-31 dispersed
Tan01g4459 Tan-Chr1:109927391 Tan05g0624 Tan-Chr5:4631506 4.40E-09 transposed
Tan01g5181 Tan-Chr1:116817948 Tan05g0624 Tan-Chr5:4631506 9.50E-53 transposed
Tan03g0807 Tan-Chr3:64177100 Tan05g0624 Tan-Chr5:4631506 2.40E-25 transposed
Tan05g2508 Tan-Chr5:76434152 Tan05g0624 Tan-Chr5:4631506 2.00E-33 transposed
Tan06g0923 Tan-Chr6:7800979 Tan05g0624 Tan-Chr5:4631506 1.50E-67 transposed
Tan08g0700 Tan-Chr8:6920820 Tan05g0624 Tan-Chr5:4631506 6.20E-154 transposed
Tan11g1117 Tan-Chr11:8826515 Tan05g0624 Tan-Chr5:4631506 2.60E-62 transposed
Tan02g0075 Tan-Chr2:923557 Tan05g0624 Tan-Chr5:4631506 6.40E-218 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67579 PF00069 Pkinase 6.60E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0624 - - - 0.0