Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g0625 | ATGTCAAATGAAGATCATCAGAAGGATCCTTATTACCCACAATTTGATCCTTTCACTCAAAACTTCCATCATCACAAACCCTTTGAAGAAGCTCCTCCTTTGACAAGTCCTTATGATGCTTTTGATCCCTCTTCTGTGGGGTTCTTCTCTGATTTCTTACATGCCTCAGCTGATTATGACTACAACAACATCCTCTCCGCTCGCCTCGACATGTCGTGCTCGTCGTCCGAAGTTATTTCTCCGATCGACGATGCTTCGAAGAAGTCCTCAGGCTTTGGAGATCAGTCGGTGGTGACCGGTGAGCACCCGTCGACAGCGAATTCCTCGACTACGTCTTCGTCCGACGAGGCTGCGGCGGGCGGCGGTGGTGATTCTGCCAAGAGTGGAGAGGTGAAAGAGTTTGATGATAAAAATGGAGAAAATGGCAAGAAAGTGAATAGAGGAAAAAAAAAGGAGATCAAAAGAGAAAAAGGGCCACGATTCGCCTTCTTGACCAAGACTGAAATTGATCATCTTGAAGATGGATATAGATGGAGAAAATATGGTCAGAAAGCAGTAAAAAACAGCCCTTTTCCAAGAAGTTATTACAAATGCACAACTCAAAATTGCAATGTGAAAAAGCGAGTAGAAAGATCATCGGAAGATCCATGTTTTGTTGTAACAACATACGAAGGAAAACACAACCACTATTGTCCGATAACACTTCGAGGCCCCAATGCTACCGGAGTGTCGTTGCCTTTATCGGGTTCACCGGGATTAGCTCCGGCGAACTTCTTCTCCGGCGAGGTGTATGAAGGGGTTGATCTGCAGCAACAATATTATCAGGTTCCTGATTATGGGCTGTTGCAAGATTTGATTAATCCATCATTTAATCGAAAGCAAGAGCCATGA | 891 | 44.56 | MSNEDHQKDPYYPQFDPFTQNFHHHKPFEEAPPLTSPYDAFDPSSVGFFSDFLHASADYDYNNILSARLDMSCSSSEVISPIDDASKKSSGFGDQSVVTGEHPSTANSSTTSSSDEAAAGGGGDSAKSGEVKEFDDKNGENGKKVNRGKKKEIKREKGPRFAFLTKTEIDHLEDGYRWRKYGQKAVKNSPFPRSYYKCTTQNCNVKKRVERSSEDPCFVVTTYEGKHNHYCPITLRGPNATGVSLPLSGSPGLAPANFFSGEVYEGVDLQQQYYQVPDYGLLQDLINPSFNRKQEP | 296 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4648497 | 4650816 | - | Tan0006465.1 | Tan05g0625 | 751933 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g0625 | 296 | MobiDBLite | consensus disorder prediction | 128 | 147 | - | - | |
Tan05g0625 | 296 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Tan05g0625 | 296 | SUPERFAMILY | WRKY DNA-binding domain | 165 | 232 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan05g0625 | 296 | ProSiteProfiles | WRKY domain profile. | 167 | 232 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan05g0625 | 296 | SMART | WRKY_cls | 172 | 231 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan05g0625 | 296 | MobiDBLite | consensus disorder prediction | 83 | 118 | - | - | |
Tan05g0625 | 296 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 91 | 236 | IPR044810 | GO:0003700(InterPro) | |
Tan05g0625 | 296 | Pfam | WRKY DNA -binding domain | 173 | 229 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan05g0625 | 296 | Gene3D | WRKY domain | 159 | 225 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan05g0625 | 296 | FunFam | WRKY transcription factor 57 | 158 | 232 | - | - | |
Tan05g0625 | 296 | MobiDBLite | consensus disorder prediction | 83 | 153 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g2664 | Tan-Chr3:79696956 | Tan05g0625 | Tan-Chr5:4648497 | 3.10E-38 | dispersed | |
Tan05g0625 | Tan-Chr5:4648497 | Tan06g2778 | Tan-Chr6:79967303 | 5.40E-36 | dispersed | |
Tan02g0079 | Tan-Chr2:933675 | Tan05g0625 | Tan-Chr5:4648497 | 4.00E-42 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27425 | PF03106 | WRKY | 5.00E-25 | CL0274 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g0625 | - | - | - | 0.0 |