Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0630 ATGCAGCAAGATCAAGCTAAAAAGAATTCAACCGAAGTGGAGTTCTTCTCCGATTATGGCGATGCGAGTAGATACAAAATTCAGGAAGTAATCGGGAAAGGAAGCTATGGTGTGGTGTGTTCTGCAATTGACACTCGCACTGGCGACAAGGTTGCTATAAAGAAGATACATAATATTTTTGAGCATATATCTGATGCGGTTAGAATTCTTCGTGAGATTAAGCTTCTTAGACTTCTTCGCCATCCTGATATTGTTGAAATTAAACACATTATGCTGCCACCATCAAGGAGGGACTTCAAAGACATCTACGTTGTTTTTGAGCTCATGGAATCAGATCTCCACCAAGTTATTAAAGCGAATGATGATCTGACTCGAGAACACTATCAGTTTTTCCTCTACCAACTTCTTCGTGCATTAAAATATATCCATACAGCTAATGTCTACCATCGAGATTTAAAACCAAAGAACATATTAGCAAATGCAAATTGTAAGCTTAAAATTTGCGATTTTGGATTGGCAAGAGTCGCGTTCAGTGACACACCGACAACAATTTTCTGGACGGATTATGTTGCTACTAGATGGTACCGAGCTCCAGAGCTATGTGGTTCATTTTTCTCCAAGTATACACCTGCAATTGATATATGGAGTATTGGCTGCATCTTTGCTGAAGTATTAATGGGGAAGCCACTTTTTCCTGGAAAAAACGTTGTTCACCAGCTTGATCTGATGACGGATCTCCTTGGAACTCCTTCATTAGATACAATCTCTAGGGTTCGTAATGACAAGGCTAGAAGATATTTAACTACCATGAGGAAAAAGCAGCCGGTGCCATTTGCTCAAAAGTTTCCAAATGCAGATCCTTTAGCGCTGAGGCTACTAGAAAGGTTGCTTGCTTTTGATCCAAAAGATAGGCCAACTGCGGAAGAGGCACTGGCTGATCCATACTTCAAGGGATTGGCAAAAATTGAGAGGGAACCTTCCTGCCAGCCAATCACTAAGATGGAATTTGAATTTGAGAGGCGGAGGGTCACAAAAGAAGACATTCAAGAGCTAATCTTCCGTGAGATACTAGAATATCATCCTCAGCTGCTAAAAGACTACATGAATGGGACTGAGAGAACAAATTTTCTATATCCAAGTGCTGTCGATCAATTTAGAAAGCAGTTTGCACATCTGGAGGAAAATGGTGGTAAAAGTGCGCCGGTAATTCCTCTTGACAGAAAGCATGTATCCCTCCCAAGGTCAACAGTTGTACACTCGAACACGGTCTATTCTAAGGACCAACTAAATAATGTACCCCTCCAAGATGGGAAGATCTCTGAAGAGACATACAGCAAGAATTCCCGAGATAGTGAAGGACGGCTAACAAATATATCAAGGACCATGCAGGCACCACAAAAGATCCCATTCGCAGCTAAGCCTGGAAGAGTGGTTGGACCAGTTATAGCAGATGGGAATGGAAGGCTAGTGAAGGAACCATACGATCCAAGAACGTTGATCAGAGGTGCCATTCTTTCTCCTGCATATCATTACCAAAAACCCATTGCTGCAGGAAATCAAGAAAGATCTGCAGCAGAAACGAAACTGGATATTTCTTTAAGGGCCACCAAGCAAGCATCCCAGTGTGGCATGGCTTCCAAATTAGGAACAGACATAGCCATCAGCATCGACTCGAACCCCTTTTACATGACACGTGCTGGAGTGAACAAGGTCGAACTCAAGGACCAAATATCCATCGACGCAAACTTTCTGCAGGCCAAGGCCGCCCAATACGGTGGTCTTGGTGCAGCGACTGCCACCACCACATCGGTTGCTCACAGAAAGGTGGTTGCCGGTCAGTTTAGCATGACAAAGATGTACTAA 1863 43.05 MQQDQAKKNSTEVEFFSDYGDASRYKIQEVIGKGSYGVVCSAIDTRTGDKVAIKKIHNIFEHISDAVRILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLMGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTTMRKKQPVPFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPITKMEFEFERRRVTKEDIQELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGGKSAPVIPLDRKHVSLPRSTVVHSNTVYSKDQLNNVPLQDGKISEETYSKNSRDSEGRLTNISRTMQAPQKIPFAAKPGRVVGPVIADGNGRLVKEPYDPRTLIRGAILSPAYHYQKPIAAGNQERSAAETKLDISLRATKQASQCGMASKLGTDIAISIDSNPFYMTRAGVNKVELKDQISIDANFLQAKAAQYGGLGAATATTTSVAHRKVVAGQFSMTKMY 620
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4684015 4689479 + Tan0022612.1 Tan05g0630 751938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0630 620 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524(InterPro)
Tan05g0630 620 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Tan05g0630 620 SMART serkin_6 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0630 620 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Tan05g0630 620 FunFam Mitogen-activated protein kinase 111 339 - -
Tan05g0630 620 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0630 620 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Tan05g0630 620 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0630 620 FunFam Mitogen-activated protein kinase 15 118 - -
Tan05g0630 620 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 22 357 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Tan05g0630 620 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0630 620 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0090 Tan-Chr2:1001157 Tan05g0630 Tan-Chr5:4684015 1.50E-244 dispersed
Tan05g0630 Tan-Chr5:4684015 Tan06g2580 Tan-Chr6:78479159 9.80E-213 dispersed
Tan11g0284 Tan-Chr11:2205601 Tan05g0630 Tan-Chr5:4684015 7.80E-28 dispersed
Tan05g3377 Tan-Chr5:85589523 Tan05g0630 Tan-Chr5:4684015 3.90E-24 transposed
Tan02g0089 Tan-Chr2:1001157 Tan05g0630 Tan-Chr5:4684015 3.60E-252 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67580 PF00069 Pkinase 1.50E-66 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0630 - - - 0.0