Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0639 ATGGGTTCTAATGTACGAGCTCGTTTCACACTCGGCAAACAGTCCTCGCTCAAACCCGAACGTGAAGGCTCCGCTGTGGTTGCCGATGAGTTGGATGATTCGATCGCGATTGATCCTGAGATTAAGTTGATGTACCTGGCGAATGATGGCGACTCGGATGGGATTAGAGAGCTGTTGGATTCGGGTACCGATGTTAATTTTCGCGATGTTGATGGCCGAACCTCTTTGCATGTTGCTGCTTGTCAGGGCAGGCCGGACGTCGTTGAGTTGCTACTCGAAAAAGGAGCGGAGGTCGACGTTCAGGACCGCTGGGGCAGCACGCCTCTTGCAGATGCCATATATTACAAGAATCAGGATGTGATCAAACTCTTAGAGAAACATGGTGCAAAGCTACCGGTGGCTCCAATGCTTGTGCAAAATGCTCTTGATGTTCCGGAATATGAGATTAATCCAAATGAGCTTGATTTTTCTAAAAGCGTGAACATTACAAAAGGAACTTTCTGCCTTGCGTCATGGCGTGGAATTGAAGTTGCTGTGAAGACACTAGGCGAGGAAGTTTTCACTGATGAGGATAAAGTGAAGGCGTTTAGGGATGAACTTTCTTTACTTCAGAAGATACGCCATCCCAACGTTGTACAATTTCTGGGAGCTGTAACACAAAGTAGTCCAATGATGATTGTCACAGAGTATTTGCCCCAGGGGGACCTTCATGCATTCTTGAAACGTAAAGGTTCCTTGAAGCTAGCAACAGTTATAAAGTTTGCTCTTGACATTGCTAGGGGAATGAATTATTTGCATGAGCATAAACCTGAAGCAATAATCCATCGCGATCTTGAACCGTCAAACATACTGCGGGATGATTCTGGGCACCTGAAAGTTGCAGACTTTGGAGTTAGCAAACTTCTGAAATTTTCAAATAGGGTCAAGGAAGATAGACCTGTGGCTGTGGCATGTCATGATACTTCATGCAACTACTTAGGACCCATCCACCAGCTTTGCTTTGCGTGTGTGTGTATTATTTGTACCCTTTTAAGGAAGTTGCTGGTTTATAAAAATGAAGAATATGATACGAGAGTGGATGTATTTTCATTTGCTTTGATCTTGCAAGAGATGATAGAAGGCAATTCACCTTTTCCAACAAAGCCAGAAAATGATGTACCAAAAGCTTATATAGCTGGTCAACGCCCACCATTTGTGGTTCCATCTAAGCGTTATGCACATGGAGTAAAGGAGCTAATCGAGGAATGTTGGGATGAAAAGCCACATAAAAGACCAACGTTTCGGCAAATAATAAGAAGGTTGGAGGATATAAACAATCGACTTGTTCAAACAAGGAGCTTGAAGGTTTGGCCCGGCCCAATCGCAAACCCTAGGTGGCGCAAAAAGGAAATGGAAATTCCTGATTTGATACCGCATATTCGGCATTGCTATCACTTCCCACCACCTCTTATTCCTTCTCTCCCGCACGCTGTTTCTGCGCCTGTACTACTCTTTTGTGGAGGCTCAAGGAACAGTCTCTTCCTCTGCTCTCCCTTCATCGTCTCTCAGGTTCTTCTCTCTTGTAAGCTCTTTCTCTCTCTTCTATCTTTCTCGCTGCTGAATTCGTTTGCGATTGTACTTGTCAAGATGGTGAAGTTTACAGCCGAGGAGCTTCGTCGGATTATGGACTTTAAGCACAACATTCGTAATATGTCTGTTATTGCTCACGTTGATCATGGAAAGTCGACACTTACTGACTCTCTTGTGGCTGCTGCGGGTATCATTGCACAAGAAGTTGCCGGTGACGTACGGATGACAGACACTCGCCAAGATGAGGCAGAGCGTGGTATCACCATTAAATCTACTGGCATCTCCCTCTACTATGAGATGTCTGATGAGTCACTGAAAAGTTACAAGGGAGAGAGGCAAGGAAACGAGTATCTTATCAACCTTATCGATTCACCTGGGCACGTTGACTTCTCATCTGAGGTTACAGCTGCTTTGCGTATTACTGATGGTGCCCTTGTTGTGGTGGATTGTGTCGAAGGTGTTTGTGTACAAACAGAGACTGTGCTCCGTCAGGCTTTGGGAGAGAGGATTAGACCTGTCTTGACTGTTAACAAGATGGATAGGTGCTTCCTTGAACTTCAAGTGGATGGAGAAGAGGCTTACCAAACATTCCAGAGGGTTATAGAGAATGCTAACGTGATTATGGCCACGTATGAGGATCCACTTCTTGGAGATGTGCAAGTGTACCCCGAGAAAGGAACAGTTGCTTTCTCTGCTGGTTTGCATGGTTGGGCATTTACCCTGACTAACTTTGCCAAGATGTATGCCTCCAAGTTTGGAGTAGATGAGTCAAAGATGATGGAGAGACTTTGGGGTGAGAACTTCTTCGATCCTGCAACCAAGAAGTGGACTAGCAAGAACACTGGCTCTCCAACATGCAAGCGTGGGTTTGTCCAGTTCTGCTACGAACCTATCAAGCAGATCATTGCAACTTGCATGAACGATCAGAAGGATAAGCTATGGCCCATGTTGCAGAAGCTTGGAGTTGTCATGAAGTCTGAAGAGAAGGATCTGATGGGTAAAGCATTGATGAAGCGAGTCATGCAAACATGGCTCCCGGCAAGCAGTGCTCTTTTGGAAATGATGATCTTTCATCTTCCATCCCCTGCCACGGCACAAAAGTACCGTGTTGAGAATTTGTACGAGGGCCCACTAGATGATGCTTATGCCAGTGCCATTAGAAGTTGCGATCCTGAGGGACCTCTTATGCTTTATGTATCGAAGATGATTCCTGCATCAGACAAGGGCAGGTTCTTTGCCTTTGGACGTGTCTTCTCTGGGAAAGTTTCAACCGGTCTGAAAGTTAGGATCATGGGTCCAAACTTTGTTCCTGGAGAGAAGAAAGATTTATACGTGAAGAGTGTCCAAAGAACTGTCATTTGGATGGGAAAGAAGCAAGAAACAGTGGAGGATGTGCCTTGTGGTAATACTGTTGCCATGGTCGGGTTAGATCAATATATCACCAAGAATGCCACTTTGACAAACGAGAAGGAAGTTGATGCTCATCCAATTCGTGCAATGAAATTTTCTGTCTCTCCCGTGGTGCGCGTGGCTGTTCAGTGCAAGGTGGCATCTGATCTTCCCAAGCTTGTGGAAGGCCTTAAACGTCTGGCGAAGTCAGACCCTATGGTCGTGTGTACCATGGAGGAATCGGGTGAGCACATTGTTGCTGGTGCTGGAGAACTTCACCTGGAGATTTGTCTGAAGGATTTGCAAGACGACTTCATGGGTGGAGCTGAGATCATAAAATCTGACCCTGTTGTGTCTTTCCGTGAAACTGTCCTTGAGAGGTCATGCCGCACAGTGATGAGTAAATCCCCCAACAAACACAATCGTCTGTACATGGAAGCACGGCCCTTGGAGGAAGGACTGGGTGAGGCTATTGACGATGGCCGCATTGGACCACGAGATGATCCTAAAATTAGGTCTAAAATTTTAGCAGAGGAGTTTGGTTGGGACAAAGATCTTGCTAAGAAGATTTGGTGCTTTGGTCCTGAGACTACTGGACCCAACATGGTGGTTGATATGTGTAAGGGAGTTCAGTATCTGAATGAAATCAAGGATTCTGTGGTGGCTGGTTTCCAATGGGCGTCGAAAGAAGGTGCATTGGCGGAAGAAAACATGAGAGGCATCTGTTTTGAAGTTTGTGATGTGGTCCTTCACGCTGATGCCATCCACAGAGGAGGTGGTCAAGTCATTCCAACCGCTAGGAGGGTAATCTATGCTTCTCAGCTGACCGCCAAACCAAGGCTTCTTGAGCCAGTGTACCTAGTGGAGATTCAGGCTCCCGAGCAGGCTCTTGGTGGTATCTACAGTGTTCTTAACCAAAAACGTGGACATGTTTTTGAGGAGATGCAGAGGCCTGGTACCCCACTTTACAACATCAAGGCATATCTTCCTGTTATTGAGTCCTTTGGTTTTTCGAGCACCTTGAGGGCTGCAACTTCCGGGCAGGCATTCCCACAGTGCGTTTTTGATCATTGGGACATGATGTCGTCAGATCCATTAGAATCTGGTTCCCAGGCTGCACAGCTAGTTGCGGATATCCGCAAGAGGAAGGGATTGAAGGAGCAAATGACCCCACTTTCCGAGTTTGAGGACAAGCTGTAA 4158 46.18 MGSNVRARFTLGKQSSLKPEREGSAVVADELDDSIAIDPEIKLMYLANDGDSDGIRELLDSGTDVNFRDVDGRTSLHVAACQGRPDVVELLLEKGAEVDVQDRWGSTPLADAIYYKNQDVIKLLEKHGAKLPVAPMLVQNALDVPEYEINPNELDFSKSVNITKGTFCLASWRGIEVAVKTLGEEVFTDEDKVKAFRDELSLLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPQGDLHAFLKRKGSLKLATVIKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKFSNRVKEDRPVAVACHDTSCNYLGPIHQLCFACVCIICTLLRKLLVYKNEEYDTRVDVFSFALILQEMIEGNSPFPTKPENDVPKAYIAGQRPPFVVPSKRYAHGVKELIEECWDEKPHKRPTFRQIIRRLEDINNRLVQTRSLKVWPGPIANPRWRKKEMEIPDLIPHIRHCYHFPPPLIPSLPHAVSAPVLLFCGGSRNSLFLCSPFIVSQVLLSCKLFLSLLSFSLLNSFAIVLVKMVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDESLKSYKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTSKNTGSPTCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLQKLGVVMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYASAIRSCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNFVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTMEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPLEEGLGEAIDDGRIGPRDDPKIRSKILAEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLESGSQAAQLVADIRKRKGLKEQMTPLSEFEDKL 1385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4753182 4768287 - Tan0013546.1 Tan05g0639 751947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0639 1385 FunFam Translation elongation factor 2 1111 1264 - -
Tan05g0639 1385 Gene3D Elongation Factor G (Translational Gtpase), domain 3 1028 1105 - -
Tan05g0639 1385 ProSiteProfiles Protein kinase domain profile. 121 441 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0639 1385 ProSiteProfiles Ankyrin repeat region circular profile. 71 103 - -
Tan05g0639 1385 SUPERFAMILY EF-G C-terminal domain-like 1269 1380 IPR035647 -
Tan05g0639 1385 SUPERFAMILY Ankyrin repeat 42 135 IPR036770 -
Tan05g0639 1385 SMART ANK_2a 104 133 IPR002110 GO:0005515(InterPro)
Tan05g0639 1385 SMART ANK_2a 71 100 IPR002110 GO:0005515(InterPro)
Tan05g0639 1385 SMART ANK_2a 38 67 IPR002110 GO:0005515(InterPro)
Tan05g0639 1385 Gene3D Transferase(Phosphotransferase) domain 1 232 453 - -
Tan05g0639 1385 SMART EFG_C_a 1266 1355 IPR000640 -
Tan05g0639 1385 Gene3D - 1112 1264 IPR014721 -
Tan05g0639 1385 Gene3D - 1265 1385 - -
Tan05g0639 1385 Gene3D - 10 147 IPR036770 -
Tan05g0639 1385 FunFam Translation elongation factor 2 545 779 - -
Tan05g0639 1385 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 600 615 IPR031157 -
Tan05g0639 1385 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515(InterPro)
Tan05g0639 1385 Pfam Protein kinase domain 168 432 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0639 1385 CDD aeEF2_snRNP_like_IV 1101 1273 - -
Tan05g0639 1385 SUPERFAMILY EF-G C-terminal domain-like 1026 1102 IPR035647 -
Tan05g0639 1385 Pfam Ankyrin repeats (3 copies) 43 131 IPR002110 GO:0005515(InterPro)
Tan05g0639 1385 SMART EFG_IV_2 1148 1264 IPR005517 GO:0005525(InterPro)
Tan05g0639 1385 FunFam Translation elongation factor 2 885 1026 - -
Tan05g0639 1385 CDD EF2_II 917 1012 - -
Tan05g0639 1385 FunFam Integrin-linked protein kinase family 23 147 - -
Tan05g0639 1385 CDD eEF2_snRNP_like_C 1269 1347 - -
Tan05g0639 1385 NCBIfam small GTP-binding protein domain 562 717 IPR005225 GO:0005525(InterPro)
Tan05g0639 1385 FunFam Translation elongation factor 2 1265 1385 - -
Tan05g0639 1385 Gene3D - 545 779 IPR027417 -
Tan05g0639 1385 SUPERFAMILY Translation proteins 884 1018 IPR009000 -
Tan05g0639 1385 PRINTS GTP-binding elongation factor signature 695 704 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Tan05g0639 1385 PRINTS GTP-binding elongation factor signature 643 653 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Tan05g0639 1385 PRINTS GTP-binding elongation factor signature 659 670 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Tan05g0639 1385 PRINTS GTP-binding elongation factor signature 607 615 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Tan05g0639 1385 PRINTS GTP-binding elongation factor signature 563 576 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Tan05g0639 1385 CDD EF2 562 772 - -
Tan05g0639 1385 SUPERFAMILY Protein kinase-like (PK-like) 165 435 IPR011009 -
Tan05g0639 1385 FunFam serine/threonine-protein kinase STY46-like 149 232 - -
Tan05g0639 1385 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 559 886 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Tan05g0639 1385 Pfam Elongation factor Tu domain 2 936 1004 IPR004161 GO:0005525(InterPro)
Tan05g0639 1385 Gene3D Translation factors 885 1026 - -
Tan05g0639 1385 Pfam Elongation Factor G, domain III 1029 1091 IPR041095 -
Tan05g0639 1385 Pfam Elongation factor Tu GTP binding domain 560 763 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Tan05g0639 1385 Pfam Elongation factor G C-terminus 1266 1353 IPR000640 -
Tan05g0639 1385 SUPERFAMILY Ribosomal protein S5 domain 2-like 1104 1268 IPR020568 -
Tan05g0639 1385 Pfam Elongation factor G, domain IV 1152 1264 IPR005517 GO:0005525(InterPro)
Tan05g0639 1385 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 545 1384 - GO:0003746(PANTHER)|GO:0003924(PANTHER)|GO:0005829(PANTHER)|GO:0006414(PANTHER)|GO:0043022(PANTHER)|GO:1990904(PANTHER)
Tan05g0639 1385 CDD EF2_snRNP_III 1029 1101 - -
Tan05g0639 1385 FunFam Translation elongation factor 2 1028 1105 - -
Tan05g0639 1385 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 546 883 IPR027417 -
Tan05g0639 1385 Gene3D Phosphorylase Kinase; domain 1 148 231 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2619 Tan-Chr3:79250923 Tan05g0639 Tan-Chr5:4753182 4.80E-110 dispersed
Tan05g0639 Tan-Chr5:4753182 Tan05g0641 Tan-Chr5:4774988 0.00E+00 dispersed
Tan10g0802 Tan-Chr10:6778818 Tan05g0639 Tan-Chr5:4753182 1.20E-27 dispersed
Tan10g0803 Tan-Chr10:6778818 Tan05g0639 Tan-Chr5:4753182 1.20E-27 dispersed
Tan05g0639 Tan-Chr5:4753182 Tan05g0640 Tan-Chr5:4774988 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67581 PF00009 GTP_EFTU 6.20E-66 CL0023 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0639 K03234 - csv:101208886 1650.18