Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g0689 | ATGAAATTCGAAGAGCAGAACCTGAAGCAACAGTCTGATCAGATATGCAGGACTATTGAGGTTGATACAATTGATCACCATCGCAGTAATTCGTCGCTGGTCGTAATGGAAGCTTGCGAAGATTGCGACAGGGATGGTGACGGCCTCTTTATTCCTCCCCTCAACTTTTCCATGGTTGATAATGGCATTTTCCGCTCCGGCTTCCCTGACTCTGCTAACTTCTCCTTCCTCCAAACCCTAGGCCTCCGTTCCATTATATGTCTATGTCCGGAGCCGTATCCGGAACACAACATGGAGTTCCTCAAGTCGAACGGGATTAGATTGTATCAATTTGGAATTGAAAGCTATAAGGAACCTTTCGTGAACATCCCAGATGATATGATTCGTGAAGCACTGAAAGTTGTCCTTGACGATAGGAATCATCCAGTTCTCATACATTGCAAGAGAGGAAAGCATCGAACAGGTTGTCTTGTGGGATGCCTGAGAAAACTGCAGAGGTGGTGCCTCACTTCTGTTTTTGATGAGTACCAGAGGTTTGCAGCTGCAAAAGCAAGAATTTCAGACCAGAGGTTTATGGAATTGTTCGATATCTCTGACTTGAAGCATCTTCCCATGTCATTCTCATGCTCAAAGAGCTGTATGATCATCTCTGGTTCCTTCCAAGACGAAGAAGCTCGAAGCTCAGTGGAAAAAGTACGGCGACCACTCAACCAAAGGTTTGCAGCTGTTAATGATCACGGGCAATGA | 747 | 45.38 | MKFEEQNLKQQSDQICRTIEVDTIDHHRSNSSLVVMEACEDCDRDGDGLFIPPLNFSMVDNGIFRSGFPDSANFSFLQTLGLRSIICLCPEPYPEHNMEFLKSNGIRLYQFGIESYKEPFVNIPDDMIREALKVVLDDRNHPVLIHCKRGKHRTGCLVGCLRKLQRWCLTSVFDEYQRFAAAKARISDQRFMELFDISDLKHLPMSFSCSKSCMIISGSFQDEEARSSVEKVRRPLNQRFAAVNDHGQ | 248 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 5004130 | 5008368 | + | Tan0013567.1 | Tan05g0689 | 751997 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g0689 | 248 | Gene3D | Protein tyrosine phosphatase superfamily | 49 | 199 | IPR029021 | - | |
Tan05g0689 | 248 | FunFam | probable tyrosine-protein phosphatase At1g05000 | 49 | 199 | - | - | |
Tan05g0689 | 248 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 51 | 197 | IPR029021 | - | |
Tan05g0689 | 248 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 145 | 155 | IPR016130 | GO:0016311(InterPro) | |
Tan05g0689 | 248 | PRINTS | Plant and fungal dual specificity phosphatase signature | 50 | 67 | IPR020428 | GO:0016791(InterPro) | |
Tan05g0689 | 248 | PRINTS | Plant and fungal dual specificity phosphatase signature | 123 | 137 | IPR020428 | GO:0016791(InterPro) | |
Tan05g0689 | 248 | PRINTS | Plant and fungal dual specificity phosphatase signature | 87 | 100 | IPR020428 | GO:0016791(InterPro) | |
Tan05g0689 | 248 | PRINTS | Plant and fungal dual specificity phosphatase signature | 106 | 120 | IPR020428 | GO:0016791(InterPro) | |
Tan05g0689 | 248 | Pfam | Tyrosine phosphatase family | 51 | 202 | IPR004861 | - | |
Tan05g0689 | 248 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 25 | 206 | - | GO:0005737(PANTHER)|GO:0016791(PANTHER) | |
Tan05g0689 | 248 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 55 | 209 | IPR020422 | GO:0006470(InterPro) | |
Tan05g0689 | 248 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 118 | 158 | IPR000387 | GO:0016311(InterPro) | |
Tan05g0689 | 248 | CDD | PFA-DSP_Siw14 | 49 | 196 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g0134 | Tan-Chr2:1243419 | Tan05g0689 | Tan-Chr5:5004130 | 3.50E-81 | dispersed | |
Tan05g0689 | Tan-Chr5:5004130 | Tan05g0691 | Tan-Chr5:5004130 | 2.20E-86 | dispersed | |
Tan05g0689 | Tan-Chr5:5004130 | Tan05g0690 | Tan-Chr5:5004130 | 8.90E-141 | tandem | |
Tan09g0602 | Tan-Chr9:52076011 | Tan05g0689 | Tan-Chr5:5004130 | 3.10E-59 | transposed | |
Tan02g0133 | Tan-Chr2:1243190 | Tan05g0689 | Tan-Chr5:5004130 | 7.00E-86 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g0689 | K18045 | - | csv:101222170 | 399.438 |