Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0692 ATGAAATTCGAAGAGCAGAACCTGAAGCAACAGTCTGATCAGATATGCAGGACTATTGAGGTTGATACAATTGATCACCATCGCAGTAATTCGTCGCTGGTCGTAATGGAAGCTTGCGAAGATTGCGACAGGGATGGTGACGGCCTCTTTATTCCTCCCCTCAACTTTTCCATGGTTGATAATGGCATTTTCCGCTCCGGCTTCCCTGACTCTGCTAACTTCTCCTTCCTCCAAACCCTAGGCCTCCGTTCCATTATATGTCTATGTCCGGAGCCGTATCCGGAACACAACATGGAGTTCCTCAAGTCGAACGGGATTAGATTGTATCAATTTGGAATTGAAAGCTATAAGGAACCTTTCGTGAACATCCCAGATGATATGATTCGTGAAGCACTGAAAGTTGTCCTTGACGATAGGAATCATCCAGTTCTCATACATTGCAAGAGAGGAAAGGTTGTCTTGTGGGATGCCTGA 474 45.57 MKFEEQNLKQQSDQICRTIEVDTIDHHRSNSSLVVMEACEDCDRDGDGLFIPPLNFSMVDNGIFRSGFPDSANFSFLQTLGLRSIICLCPEPYPEHNMEFLKSNGIRLYQFGIESYKEPFVNIPDDMIREALKVVLDDRNHPVLIHCKRGKVVLWDA 157
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5004130 5008368 + Tan0013567.4 Tan05g0692 752000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0692 157 Pfam Tyrosine phosphatase family 51 152 IPR004861 -
Tan05g0692 157 ProSiteProfiles Dual specificity protein phosphatase domain profile. 55 157 IPR020422 GO:0006470(InterPro)
Tan05g0692 157 PANTHER TYROSINE-PROTEIN PHOSPHATASE 23 151 - GO:0005737(PANTHER)|GO:0016791(PANTHER)
Tan05g0692 157 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 51 151 IPR029021 -
Tan05g0692 157 PRINTS Plant and fungal dual specificity phosphatase signature 87 100 IPR020428 GO:0016791(InterPro)
Tan05g0692 157 PRINTS Plant and fungal dual specificity phosphatase signature 106 120 IPR020428 GO:0016791(InterPro)
Tan05g0692 157 PRINTS Plant and fungal dual specificity phosphatase signature 50 67 IPR020428 GO:0016791(InterPro)
Tan05g0692 157 PRINTS Plant and fungal dual specificity phosphatase signature 123 137 IPR020428 GO:0016791(InterPro)
Tan05g0692 157 Gene3D Protein tyrosine phosphatase superfamily 49 152 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0690 Tan-Chr5:5004130 Tan05g0692 Tan-Chr5:5004130 2.10E-86 dispersed
Tan05g0692 Tan-Chr5:5004130 Tan09g0602 Tan-Chr9:52076011 3.10E-38 dispersed
Tan05g0691 Tan-Chr5:5004130 Tan05g0692 Tan-Chr5:5004130 1.20E-90 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0692 K18045 - csv:101222170 261.536