Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0734 ATGGAGGATCAGCGAGATGATGTTGCACCATCAGAGCAAGGGCCTTCCAATGCTTCCTGGTGGTCTTCTGATTTCGTGGAGAAATTTGGATCTGCTTCTTTGGGTCCTCGTGAGGACATTGTAAGTGCAAAGGAAGAGATCATCAATTCTGACCAAGATGTGTTGTTGTCGCCTCAAAGAGCTTCTCAAATTCTCTGGCGTACTGGAATGCTTTGTGAACCAATTCCAGATGGTTTCTATTCTGTCATTCCGGATAAAAGGCTAAAAGAGCGGTTCCACAGTGTTCCTTCCCTGGACGAGCTTCGTGTTTTGGAGGCCGAAGGTTACAGAAACGATGTTATTCTTGTGGAGACGGTGAAAGATAAAAAGCTTTCTATGCTGAAGCAACTGATCTTGACACTGGTTAAGGGATTGAATTCAAATCCAGCTGCAATTATCAAGAAGATCGCTGGACTGGTTTCTGATTTTTATAAACGACCAATTTTAGAAAGTCCTGCAAAAGCTGCGTTAGAAGAAACCTCCTACTTGTTCGAGGATAGAGGCATTCAATTGCTTGGACAAATAAAATTTGGTTCATGCCGTCCAAGAGCTATCTTATTTAAGGTTCTGGCAGACACTGTAGGGCTTGAAAGCCGTCTCATGGTGGGCTTGCCGAGTGAGGGGGCTATTGGGTGCGTGGACTCATACAAGCATATGTCTGTGACAGTTGTGTTGAATTCTGTGGAACTAGTAATTGATCTTATGCGATTTCCTGGCCAGTTGTTACCTCGGTCAACTAAGGCAATTTTTATGACCCATATTTCTGCTGCTGGGGAAAGCGATTCTGCAGAAAACGACTCCTGTGATTCACCACTAGAACCTAATAGTCCTCTTTATGGGTTCTCGGAGAGAGTTGATCCTGACAGTGTTGAAAAAGATGAGAGCCTTCAATTCCACAGAAAATTTGAAGCAGCTTCAAATGCATATGGTCCTCCTTTGCGCAACTTGATGTTACGATCAAGTACATCACTTGACAGGAAACTGAGTCGGAGAAAGGATATTGCTGAACAGCGGACTGCTAGTTCAAGTCCAGAGCATCCTTCATTTCGGGCGCGTGGCCGGTCCATGCTTAGTGGGGATAGGAAAGCCTTCAGAGATTTTTCTGATGATGTCTCTACTACAAGCTACAGATCAGATGGTGCTTCAACTTCAGAAGCACGTCGAATAAGAAGAAGGAGCATCAGCATTACTCCAGAGATTGGTGATGATATCGTGAGGGCTGTGCGAGCAATGAATGAAACAATGAAGCAAAATCGTCTCTCGAGAGGACATGAAGATGACAGGTCGTTCTCCCACCCTTCAAATGAAAGAAATAATAGTTCAGATGTTCGGAGAAATGATCCAGTGGGTTCGCAAAGAGCAATATCATTACCATCATCGCCACATGGGTATAGGGGTCAAACCTCTGATAGAAGGGAGCATTCGGCATATGCGAATGATGGTTTAGCCTCAAAATGGACTCAAGTTCTTGAATCTTTCTCCTTGAACGACAAACCACTATTACCTTACCCAGAATGGAACATTGATTACTCAGAACTGACAGTTGGTATCCGTATTGGAATTGGGTTTTTTGGAGAAGTTTTTCGTGGCATTTGGAATGGAACAGATGTGGCGATCAAAGTTTTCCTCGAGCAAGATCTAACTCCTGAAAACATTGAAGACTTCTGTAATGAGATATCCATTCTTAGTCGTCTTCGACATCCTAATGTTATATTGTTTCTGGGTGCATGCACAAAGCCGCCACGCTTATCAATGATCACCGAATACATGGAAATGGGCTCCTTGTATTCACTGATCCATTTGAGTGGTCAGAAAAAAAAACTTAGCTGGCGGAGGAGATTAAAGATGTTGCGCGACATATGTAGGGGTTTGATGTGCATACATCGAATGAAAATAGCTCATCGGGACCTGAAAAGTGCAAATTGCCTAGTGAACAAGCATTGGACCGTGAAGATATGTGATTTTGGACTTTCAAGAATATTGACAGAGGCTCCAGCAAGAGGGTCTCCATCTGCAGGAACGCCAGAATGGATGGCTCCCGAGCTCTTCAGAAATGAACCCTTCACTGAAAAGTGCGATATTTTCAGCCTGGGGGTCATTATGTGGGAGCTCTGCACGCTAAATAGACCGTGGGAGGGTGTTCCACCGGAGCGGGTTGTTTATGCTGTTGGCACTGAGGGATCACGCCTAGAGATTCCTGAAGGCCCACTTGGCAGACTTATATCAGATTGTTGGGCAGAACCAAATGAACGGCCAAGCTGTGAAGAGATTCTCTCACGCTTGCTCGACTGCGAGTACTCACTTTCTTGA 2349 44.57 MEDQRDDVAPSEQGPSNASWWSSDFVEKFGSASLGPREDIVSAKEEIINSDQDVLLSPQRASQILWRTGMLCEPIPDGFYSVIPDKRLKERFHSVPSLDELRVLEAEGYRNDVILVETVKDKKLSMLKQLILTLVKGLNSNPAAIIKKIAGLVSDFYKRPILESPAKAALEETSYLFEDRGIQLLGQIKFGSCRPRAILFKVLADTVGLESRLMVGLPSEGAIGCVDSYKHMSVTVVLNSVELVIDLMRFPGQLLPRSTKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGFSERVDPDSVEKDESLQFHRKFEAASNAYGPPLRNLMLRSSTSLDRKLSRRKDIAEQRTASSSPEHPSFRARGRSMLSGDRKAFRDFSDDVSTTSYRSDGASTSEARRIRRRSISITPEIGDDIVRAVRAMNETMKQNRLSRGHEDDRSFSHPSNERNNSSDVRRNDPVGSQRAISLPSSPHGYRGQTSDRREHSAYANDGLASKWTQVLESFSLNDKPLLPYPEWNIDYSELTVGIRIGIGFFGEVFRGIWNGTDVAIKVFLEQDLTPENIEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMEMGSLYSLIHLSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIAHRDLKSANCLVNKHWTVKICDFGLSRILTEAPARGSPSAGTPEWMAPELFRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYAVGTEGSRLEIPEGPLGRLISDCWAEPNERPSCEEILSRLLDCEYSLS 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5240538 5249469 - Tan0011076.2 Tan05g0734 752042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0734 782 MobiDBLite consensus disorder prediction 431 456 - -
Tan05g0734 782 Gene3D Phosphorylase Kinase; domain 1 519 604 - -
Tan05g0734 782 FunFam Serine/threonine-protein kinase isoform 1 517 604 - -
Tan05g0734 782 PANTHER SERINE-THREONINE PROTEIN KINASE 324 774 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan05g0734 782 MobiDBLite consensus disorder prediction 1 21 - -
Tan05g0734 782 ProSiteProfiles Protein kinase domain profile. 526 781 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0734 782 Gene3D Transferase(Phosphotransferase) domain 1 605 781 - -
Tan05g0734 782 Pfam Ethylene-responsive protein kinase Le-CTR1 59 254 - -
Tan05g0734 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0734 782 Pfam Protein tyrosine and serine/threonine kinase 528 774 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0734 782 MobiDBLite consensus disorder prediction 457 478 - -
Tan05g0734 782 SUPERFAMILY Protein kinase-like (PK-like) 502 774 IPR011009 -
Tan05g0734 782 MobiDBLite consensus disorder prediction 340 370 - -
Tan05g0734 782 MobiDBLite consensus disorder prediction 273 298 - -
Tan05g0734 782 ProSitePatterns Protein kinases ATP-binding region signature. 532 553 IPR017441 GO:0005524(InterPro)
Tan05g0734 782 MobiDBLite consensus disorder prediction 429 485 - -
Tan05g0734 782 SMART serkin_6 526 775 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0734 782 CDD STKc_MAP3K-like 532 774 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0734 Tan-Chr5:5240538 Tan05g0736 Tan-Chr5:5240538 0.00E+00 dispersed
Tan05g0733 Tan-Chr5:5240538 Tan05g0734 Tan-Chr5:5240538 0.00E+00 tandem
Tan05g0734 Tan-Chr5:5240538 Tan05g0735 Tan-Chr5:5240538 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67583 PF07714 PK_Tyr_Ser-Thr 5.20E-59 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0734 - - - 0.0