Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0735 ATGGAGGATCAGCGAGATGATGTTGCACCATCAGAGCAAGGGCCTTCCAATGCTTCCTGGTGGTCTTCTGATTTCGTGGAGAAATTTGGATCTGCTTCTTTGGGTCCTCGTGAGGACATTGTAAGTGCAAAGGAAGAGATCATCAATTCTGACCAAGATGTGTTGTTGTCGCCTCAAAGAGCTTCTCAAATTCTCTGGCGTACTGGAATGCTTTGTGAACCAATTCCAGATGGTTTCTATTCTGTCATTCCGGATAAAAGGCTAAAAGAGCGGTTCCACAGTGTTCCTTCCCTGGACGAGCTTCGTGTTTTGGAGGCCGAAGGTTACAGAAACGATGTTATTCTTGTGGAGACGGTGAAAGATAAAAAGCTTTCTATGCTGAAGCAACTGATCTTGACACTGGTTAAGGGATTGAATTCAAATCCAGCTGCAATTATCAAGAAGATCGCTGGACTGGTTTCTGATTTTTATAAACGACCAATTTTAGAAAGTCCTGCAAAAGCTGCGTTAGAAGAAACCTCCTACTTGTTCGAGGATAGAGGCATTCAATTGCTTGGACAAATAAAATTTGGTTCATGCCGTCCAAGAGCTATCTTATTTAAGGTTCTGGCAGACACTGTAGGGCTTGAAAGCCGTCTCATGGTGGGCTTGCCGAGTGAGGGGGCTATTGGGTGCGTGGACTCATACAAGCATATGTCTGTGACAGTTGTGTTGAATTCTGTGGAACTAGTAATTGATCTTATGCGATTTCCTGGCCAGTTGTTACCTCGGTCAACTAAGGCAATTTTTATGACCCATATTTCTGCTGCTGGGGAAAGCGATTCTGCAGAAAACGACTCCTGTGATTCACCACTAGAACCTAATAGTCCTCTTTATGGGTTCTCGGAGAGAGTTGATCCTGACAGTGTTGAAAAAGATGAGAGCCTTCAATTCCACAGAAAATTTGAAGCAGCTTCAAATGCATATGGTCCTCCTTTGCGCAACTTGATGTTACGATCAAGTACATCACTTGACAGGAAACTGAGTCCAGAGCATCCTTCATTTCGGGCGCGTGGCCGGTCCATGCTTAGTGGGGATAGGAAAGCCTTCAGAGATTTTTCTGATGATGTCTCTACTACAAGCTACAGATCAGATGGTGCTTCAACTTCAGAAGCACGTCGAATAAGAAGAAGGAGCATCAGCATTACTCCAGAGATTGGTGATGATATCGTGAGGGCTGTGCGAGCAATGAATGAAACAATGAAGCAAAATCGTCTCTCGAGAGGACATGAAGATGACAGGTCGTTCTCCCACCCTTCAAATGAAAGAAATAATAGTTCAGATGTTCGGAGAAATGATCCAGTGGGTTCGCAAAGAGCAATATCATTACCATCATCGCCACATGGGTATAGGGGTCAAACCTCTGATAGAAGGGAGCATTCGGCATATGCGAATGATGGTTTAGCCTCAAAATGGACTCAAGTTCTTGAATCTTTCTCCTTGAACGACAAACCACTATTACCTTACCCAGAATGGAACATTGATTACTCAGAACTGACAGTTGGTATCCGTATTGGAATTGGGTTTTTTGGAGAAGTTTTTCGTGGCATTTGGAATGGAACAGATGTGGCGATCAAAGTTTTCCTCGAGCAAGATCTAACTCCTGAAAACATTGAAGACTTCTGTAATGAGATATCCATTCTTAGTCGTCTTCGACATCCTAATGTTATATTGTTTCTGGGTGCATGCACAAAGCCGCCACGCTTATCAATGATCACCGAATACATGGAAATGGGCTCCTTGTATTCACTGATCCATTTGAGTGGTCAGAAAAAAAAACTTAGCTGGCGGAGGAGATTAAAGATGTTGCGCGACATATGTAGGGGTTTGATGTGCATACATCGAATGAAAATAGCTCATCGGGACCTGAAAAGTGCAAATTGCCTAGTGAACAAGCATTGGACCGTGAAGATATGTGATTTTGGACTTTCAAGAATATTGACAGAGGCTCCAGCAAGAGGGTCTCCATCTGCAGGAACGCCAGAATGGATGGCTCCCGAGCTCTTCAGAAATGAACCCTTCACTGAAAAGTGCGATATTTTCAGCCTGGGGGTCATTATGTGGGAGCTCTGCACGCTAAATAGACCGTGGGAGGGTGTTCCACCGGAGCGGGTTGTTTATGCTGTTGGCACTGAGGGATCACGCCTAGAGATTCCTGAAGGCCCACTTGGCAGACTTATATCAGATTGTTGGGCAGAACCAAATGAACGGCCAAGCTGTGAAGAGATTCTCTCACGCTTGCTCGACTGCGAGTACTCACTTTCTTGA 2307 44.52 MEDQRDDVAPSEQGPSNASWWSSDFVEKFGSASLGPREDIVSAKEEIINSDQDVLLSPQRASQILWRTGMLCEPIPDGFYSVIPDKRLKERFHSVPSLDELRVLEAEGYRNDVILVETVKDKKLSMLKQLILTLVKGLNSNPAAIIKKIAGLVSDFYKRPILESPAKAALEETSYLFEDRGIQLLGQIKFGSCRPRAILFKVLADTVGLESRLMVGLPSEGAIGCVDSYKHMSVTVVLNSVELVIDLMRFPGQLLPRSTKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGFSERVDPDSVEKDESLQFHRKFEAASNAYGPPLRNLMLRSSTSLDRKLSPEHPSFRARGRSMLSGDRKAFRDFSDDVSTTSYRSDGASTSEARRIRRRSISITPEIGDDIVRAVRAMNETMKQNRLSRGHEDDRSFSHPSNERNNSSDVRRNDPVGSQRAISLPSSPHGYRGQTSDRREHSAYANDGLASKWTQVLESFSLNDKPLLPYPEWNIDYSELTVGIRIGIGFFGEVFRGIWNGTDVAIKVFLEQDLTPENIEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMEMGSLYSLIHLSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIAHRDLKSANCLVNKHWTVKICDFGLSRILTEAPARGSPSAGTPEWMAPELFRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYAVGTEGSRLEIPEGPLGRLISDCWAEPNERPSCEEILSRLLDCEYSLS 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5240538 5249469 - Tan0011076.3 Tan05g0735 752043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0735 768 CDD STKc_MAP3K-like 518 760 - -
Tan05g0735 768 MobiDBLite consensus disorder prediction 443 464 - -
Tan05g0735 768 Pfam Ethylene-responsive protein kinase Le-CTR1 59 254 - -
Tan05g0735 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0735 768 Pfam Protein tyrosine and serine/threonine kinase 514 760 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0735 768 MobiDBLite consensus disorder prediction 1 21 - -
Tan05g0735 768 FunFam Serine/threonine-protein kinase isoform 1 503 590 - -
Tan05g0735 768 Gene3D Phosphorylase Kinase; domain 1 505 590 - -
Tan05g0735 768 MobiDBLite consensus disorder prediction 337 356 - -
Tan05g0735 768 ProSitePatterns Protein kinases ATP-binding region signature. 518 539 IPR017441 GO:0005524(InterPro)
Tan05g0735 768 MobiDBLite consensus disorder prediction 415 471 - -
Tan05g0735 768 Gene3D Transferase(Phosphotransferase) domain 1 591 767 - -
Tan05g0735 768 SMART serkin_6 512 761 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0735 768 ProSiteProfiles Protein kinase domain profile. 512 767 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0735 768 MobiDBLite consensus disorder prediction 417 442 - -
Tan05g0735 768 SUPERFAMILY Protein kinase-like (PK-like) 488 760 IPR011009 -
Tan05g0735 768 PANTHER SERINE-THREONINE PROTEIN KINASE 331 760 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0735 Tan-Chr5:5240538 Tan05g0737 Tan-Chr5:5240538 0.00E+00 dispersed
Tan05g0734 Tan-Chr5:5240538 Tan05g0735 Tan-Chr5:5240538 0.00E+00 tandem
Tan05g0735 Tan-Chr5:5240538 Tan05g0736 Tan-Chr5:5240538 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67584 PF07714 PK_Tyr_Ser-Thr 5.00E-59 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0735 - - - 0.0