Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0736 ATGGAGGATCAGCGAGATGATGTTGCACCATCAGAGCAAGGGCCTTCCAATGCTTCCTGGTGGTCTTCTGATTTCGTGGAGAAATTTGGATCTGCTTCTTTGGGTCCTCGTGAGGACATTGTAAGTGCAAAGGAAGAGATCATCAATTCTGACCAAGATGTGTTGTTGTCGCCTCAAAGAGCTTCTCAAATTCTCTGGCGTACTGGAATGCTTTGTGAACCAATTCCAGATGGTTTCTATTCTGTCATTCCGGATAAAAGGCTAAAAGAGCGGTTCCACAGTGTTCCTTCCCTGGACGAGCTTCGTGTTTTGGAGGCCGAAGGTTACAGAAACGATGTTATTCTTGTGGAGACGGTGAAAGATAAAAAGCTTTCTATGCTGAAGCAACTGATCTTGACACTGGTTAAGGGATTGAATTCAAATCCAGCTGCAATTATCAAGAAGATCGCTGGACTGGTTTCTGATTTTTATAAACGACCAATTTTAGAAAGTCCTGCAAAAGCTGCGTTAGAAGAAACCTCCTACTTGTTCGAGGATAGAGGCATTCAATTGCTTGGACAAATAAAATTTGGTTCATGCCGTCCAAGAGCTATCTTATTTAAGGTTCTGGCAGACACTGTAGGGCTTGAAAGCCGTCTCATGGTGGGCTTGCCGAGTGAGGGGGCTATTGGGTGCGTGGACTCATACAAGCATATGTCTGTGACAGTTGTGTTGAATTCTGTGGAACTAGTAATTGATCTTATGCGATTTCCTGGCCAGTTGTTACCTCGGTCAACTAAGGCAATTTTTATGACCCATATTTCTGCTGCTGGGGAAAGCGATTCTGCAGAAAACGACTCCTGTGATTCACCACTAGAACCTAATAGTCCTCTTTATGGGTTCTCGGAGAGAGTTGATCCTGACAGTGTTGAAAAAGATGAGAGCCTTCAATTCCACAGAAAATTTGAAGCAGCTTCAAATGCATATGGTCCTCCTTTGCGCAACTTGATGTTACGATCAAGTACATCACTTGACAGGAAACTGAGTTTATCACATAGTGAACCTAATATTGCAAATGCATTTTGGCGACGTAGTCGGAGAAAGGATATTGCTGAACAGCGGACTGCTAGTTCAAGTCCAGAGCATCCTTCATTTCGGGCGCGTGGCCGGTCCATGCTTAGTGGGGATAGGAAAGCCTTCAGAGATTTTTCTGATGATGTCTCTACTACAAGCTACAGATCAGATGGTGCTTCAACTTCAGAAGCACGTCGAATAAGAAGAAGGAGCATCAGCATTACTCCAGAGATTGGTGATGATATCGTGAGGGCTGTGCGAGCAATGAATGAAACAATGAAGCAAAATCGTCTCTCGAGAGGACATGAAGATGACAGGTCGTTCTCCCACCCTTCAAATGAAAGAAATAATAGTTCAGATGTTCGGAGAAATGATCCAGTGGGTTCGCAAAGAGCAATATCATTACCATCATCGCCACATGGGTATAGGGGTCAAACCTCTGATAGAAGGGAGCATTCGGCATATGCGAATGATGGTTTAGCCTCAAAATGGACTCAAGTTCTTGAATCTTTCTCCTTGAACGACAAACCACTATTACCTTACCCAGAATGGAACATTGATTACTCAGAACTGACAGTTGGTATCCGTATTGGAATTGGGTTTTTTGGAGAAGTTTTTCGTGGCATTTGGAATGGAACAGATGTGGCGATCAAAGTTTTCCTCGAGCAAGATCTAACTCCTGAAAACATTGAAGACTTCTGTAATGAGATATCCATTCTTAGTCGTCTTCGACATCCTAATGTTATATTGTTTCTGGGTGCATGCACAAAGCCGCCACGCTTATCAATGATCACCGAATACATGGAAATGGGCTCCTTGTATTCACTGATCCATTTGAGTGGTCAGAAAAAAAAACTTAGCTGGCGGAGGAGATTAAAGATGTTGCGCGACATATGTAGGGGTTTGATGTGCATACATCGAATGAAAATAGCTCATCGGGACCTGAAAAGTGCAAATTGCCTAGTGAACAAGCATTGGACCGTGAAGATATGTGATTTTGGACTTTCAAGAATATTGACAGAGGCTCCAGCAAGAGGGTCTCCATCTGCAGGAACGCCAGAATGGATGGCTCCCGAGCTCTTCAGAAATGAACCCTTCACTGAAAAGTGCGATATTTTCAGCCTGGGGGTCATTATGTGGGAGCTCTGCACGCTAAATAGACCGTGGGAGGGTGTTCCACCGGAGCGGGTTGTTTATGCTGTTGGCACTGAGGGATCACGCCTAGAGATTCCTGAAGGCCCACTTGGCAGACTTATATCAGATTGTTGGGCAGAACCAAATGAACGGCCAAGCTGTGAAGAGATTCTCTCACGCTTGCTCGACTGCGAGTACTCACTTTCTTGA 2397 44.39 MEDQRDDVAPSEQGPSNASWWSSDFVEKFGSASLGPREDIVSAKEEIINSDQDVLLSPQRASQILWRTGMLCEPIPDGFYSVIPDKRLKERFHSVPSLDELRVLEAEGYRNDVILVETVKDKKLSMLKQLILTLVKGLNSNPAAIIKKIAGLVSDFYKRPILESPAKAALEETSYLFEDRGIQLLGQIKFGSCRPRAILFKVLADTVGLESRLMVGLPSEGAIGCVDSYKHMSVTVVLNSVELVIDLMRFPGQLLPRSTKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGFSERVDPDSVEKDESLQFHRKFEAASNAYGPPLRNLMLRSSTSLDRKLSLSHSEPNIANAFWRRSRRKDIAEQRTASSSPEHPSFRARGRSMLSGDRKAFRDFSDDVSTTSYRSDGASTSEARRIRRRSISITPEIGDDIVRAVRAMNETMKQNRLSRGHEDDRSFSHPSNERNNSSDVRRNDPVGSQRAISLPSSPHGYRGQTSDRREHSAYANDGLASKWTQVLESFSLNDKPLLPYPEWNIDYSELTVGIRIGIGFFGEVFRGIWNGTDVAIKVFLEQDLTPENIEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMEMGSLYSLIHLSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIAHRDLKSANCLVNKHWTVKICDFGLSRILTEAPARGSPSAGTPEWMAPELFRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYAVGTEGSRLEIPEGPLGRLISDCWAEPNERPSCEEILSRLLDCEYSLS 798
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5240538 5248842 - Tan0011076.4 Tan05g0736 752044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0736 798 ProSiteProfiles Protein kinase domain profile. 542 797 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0736 798 MobiDBLite consensus disorder prediction 362 386 - -
Tan05g0736 798 MobiDBLite consensus disorder prediction 447 472 - -
Tan05g0736 798 MobiDBLite consensus disorder prediction 1 21 - -
Tan05g0736 798 ProSitePatterns Protein kinases ATP-binding region signature. 548 569 IPR017441 GO:0005524(InterPro)
Tan05g0736 798 Pfam Ethylene-responsive protein kinase Le-CTR1 59 254 - -
Tan05g0736 798 FunFam Serine/threonine-protein kinase isoform 1 533 620 - -
Tan05g0736 798 PANTHER SERINE-THREONINE PROTEIN KINASE 318 790 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan05g0736 798 SMART serkin_6 542 791 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0736 798 Gene3D Transferase(Phosphotransferase) domain 1 621 797 - -
Tan05g0736 798 MobiDBLite consensus disorder prediction 473 494 - -
Tan05g0736 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0736 798 Pfam Protein tyrosine and serine/threonine kinase 544 790 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0736 798 MobiDBLite consensus disorder prediction 445 501 - -
Tan05g0736 798 SUPERFAMILY Protein kinase-like (PK-like) 518 790 IPR011009 -
Tan05g0736 798 Gene3D Phosphorylase Kinase; domain 1 535 620 - -
Tan05g0736 798 CDD STKc_MAP3K-like 548 790 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0733 Tan-Chr5:5240538 Tan05g0736 Tan-Chr5:5240538 0.00E+00 dispersed
Tan05g0734 Tan-Chr5:5240538 Tan05g0736 Tan-Chr5:5240538 0.00E+00 dispersed
Tan05g0736 Tan-Chr5:5240538 Tan05g2200 Tan-Chr5:72948055 8.80E-73 dispersed
Tan05g0735 Tan-Chr5:5240538 Tan05g0736 Tan-Chr5:5240538 0.00E+00 tandem
Tan05g0736 Tan-Chr5:5240538 Tan05g0737 Tan-Chr5:5240538 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67585 PF07714 PK_Tyr_Ser-Thr 5.40E-59 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0736 - - - 0.0