Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0748 ATGGGTAATTTCTTTTGTTCATTCTTGTTCTCATTTCTTTGGTTTTTGGGGATTGAATGCTATCGTCCTGTCTTTTTATCTGTGTTTGTTCTTAGGGGTAAAAGTACTTCTGGAAACTTTTGGCTCAACGTAGGTTTCAAATTCCCTGAAATGTCTGAGACAAGTATTGACTCTACTCGGTGCAGTCATAAAGGAAGTAATGATGGAGAAAGCTACATTAATTCGCACAAGGCAACTTCAGTTCGAATGGTAATAGTAGCACACCAGCTTCCTTTAGAAGCAGAGCAAAGAAATGATAAAAGTTGGACTTTCAGAAAGGATGAGGATTCTTTCCTTTTCAAACTGGATGATGGTTTACGAGACGACGAGACGCTTGTTTTCCATGTCGGATGTCTGAAGGTTAACATTCATGAAGACGAACAACAGGAGGTGTCCAAGACATTGCTGGATATATTATGCATTCCTACATTTTTGCCTCCAGAAATCTTAAAGAAGTCTTATTATGGTTTCTGTGTGGGGTATCTGTGGCCTCTTTTCCTCTCTATGGAACCTTTTGCTATCAAGCAACCGATTTGGCCTCTCTGGAATGCATACATTTCAGCGAATATGTTGTTTTCGCAAAAAGTGATGGAAGTTTGCAACCCAGAACGAGATTATATTTGGATCCATGATTACCATCTAATGGTGCTTCCAAGCTTCTTAAGAGAGAAGTATGTTCGGATGAAGATAGGATTTTTCTTTCACACCCCTTTTCCTTCATTTGAGAACTACAGAACTCTTATTGTAAGAGAAGAAATACTCAGGTGTTTACTCAACTGTGATGTAATTGGATTCCACAATTATGATTATGCCCGAAATTTCCTTGCGTGTTGCAGCCGAATTCTGGGTCTAAAACATAAGCTAGATAAAGGCTTCCTTGAATTGGAATACTGTGGAAGGAATATTAGGATAAAAGTTATGCCAGTCGGAATTGATATGGCTCAAATTGAGTCGGTGATGGAAAAGGTGGAAGGGGAGTTTCAGGCAAAGACTAAACATTTGGTTGGAAAGACAGTCCTACTAAGTATAGATGATATCGAAATTTTCGAAGGTACCGAACTGAAATTGCTTGCAATGGAACAGATGCTAAAACAGCATCCGAAAGAGCAGGGACGAGCCGTATTAGTCCAGATACTTAAGCCTGCTAGAGGCCAAGGGATACATTTTGATAATATACTATATCATATAAGGGAAACCTGCGAAAGAATAAACAAAATATACGAGAAATTGGGCTATACACCAATCTATCTCCTTGAACATAAAGTTTGCACCATTGAGAAATTTGCCTACTATAGCATAGCTGAGTGCCTTCTTGTTACACCTTTTGGGGATGGGATAAACCTTTATCCTTGTGAATATACTGCCTGTAGACAGTGGATAACTGGTTCGGGATCAGTTGTAAGGTCACATGAGCAGCGCAGGAAGAGCATGATAGTGATATCAGAATTTATGGGGTGTTCTTTATCACTGAGTGGGGCACTGCGTGTCAATCCAATGAATGTCCAAGAAGTTGCCATGAAAATGTACGAAGCAATTTCAATGGATGATTCACTGAAACAAATACGACATAGGAAGAATTACGAGCATATTAGCAAGCATGATGTCATTGGCTGGTCAAGAAGTTTCTACAAAGACATGGTGCAAACTTGGGAAAATCAATCCTGGAGGGCATTCACGGGAGTTGACTCTGGCCTTCACTTCAGGGTTGTGTCTGTTGATCCCTGTTTCGAAAAGCTTCCAATAGATAATATGGCATCAGACTATTGGAAGGCAAAGACTAGGGTCATTCTTTTGGACTATGATGGTACATTGATTCCCATAGACTCTGTAGATAAGTCTCCATGTGAGGATGTTATCTCAACCCTCAATGATCTTTGTCGAGATAAGAAAAATGTAGTTTTCATTGTTAGCGGAAGAGGGAAAGACAGCTTAGGCGAGTGGTTCAAGTCTTGCCAAAATCTTGGGATAGCAGCAGAACATGGATTCTTTTTGAGGTGGCCAGGAAATGAAGAATGGGAAACCTTTGGTCAGAGTTCTGATATACGTTGGAAGGGGATAGCCAACCGTACCATGGAATTTTATACTTCGGTTATTGATGGTTCATACATTGAAAGGAAAGAGCATGCTCTAGTGTGGAACTATCAGAATGCAGAACCAGAATTTGCATCTACCCAGGCTAAAGAGATTTTGGATCACCTAGAGGATATTTTGGCCAATGATCCTGTAACTGTCAAGAGTGGCAAGTTCATTGTAGAAGTAGAATCTCAGGGAGTTAACAAAGGCACGGCTACAAAGATGATCCTCGAATCAATGAAGAAGAAAGAAGAGAAAGGAGACAAGTTTATACTGTCCATTGGTGATGATCAATCTGATGAGGATATGTTTGAAATCCTTAATGCAACAGCCGACGGCAATCTTTCATTCCCCAATCCAGTTTTCACATGTACTATTGGTCAAAAGCCGACCAAAGCCAAGTATTATTTGGAAAGCACAAATGAAGTGATTAAGGTCCTTGCAGAAGTGGCTATGTTGTATTTTCTGAAAGAGTGGCAGGATTGA 2598 40.07 MGNFFCSFLFSFLWFLGIECYRPVFLSVFVLRGKSTSGNFWLNVGFKFPEMSETSIDSTRCSHKGSNDGESYINSHKATSVRMVIVAHQLPLEAEQRNDKSWTFRKDEDSFLFKLDDGLRDDETLVFHVGCLKVNIHEDEQQEVSKTLLDILCIPTFLPPEILKKSYYGFCVGYLWPLFLSMEPFAIKQPIWPLWNAYISANMLFSQKVMEVCNPERDYIWIHDYHLMVLPSFLREKYVRMKIGFFFHTPFPSFENYRTLIVREEILRCLLNCDVIGFHNYDYARNFLACCSRILGLKHKLDKGFLELEYCGRNIRIKVMPVGIDMAQIESVMEKVEGEFQAKTKHLVGKTVLLSIDDIEIFEGTELKLLAMEQMLKQHPKEQGRAVLVQILKPARGQGIHFDNILYHIRETCERINKIYEKLGYTPIYLLEHKVCTIEKFAYYSIAECLLVTPFGDGINLYPCEYTACRQWITGSGSVVRSHEQRRKSMIVISEFMGCSLSLSGALRVNPMNVQEVAMKMYEAISMDDSLKQIRHRKNYEHISKHDVIGWSRSFYKDMVQTWENQSWRAFTGVDSGLHFRVVSVDPCFEKLPIDNMASDYWKAKTRVILLDYDGTLIPIDSVDKSPCEDVISTLNDLCRDKKNVVFIVSGRGKDSLGEWFKSCQNLGIAAEHGFFLRWPGNEEWETFGQSSDIRWKGIANRTMEFYTSVIDGSYIERKEHALVWNYQNAEPEFASTQAKEILDHLEDILANDPVTVKSGKFIVEVESQGVNKGTATKMILESMKKKEEKGDKFILSIGDDQSDEDMFEILNATADGNLSFPNPVFTCTIGQKPTKAKYYLESTNEVIKVLAEVAMLYFLKEWQD 865
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5381250 5384722 + Tan0019402.1 Tan05g0748 752056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0748 865 Gene3D - 690 769 - -
Tan05g0748 865 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 736 862 - -
Tan05g0748 865 FunFam Trehalose-6-phosphate synthase 8 77 329 - -
Tan05g0748 865 CDD GT20_TPS 82 559 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Tan05g0748 865 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 74 856 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(InterPro)|GO:0005992(PANTHER)|GO:0070413(PANTHER)
Tan05g0748 865 Gene3D - 609 841 IPR023214 -
Tan05g0748 865 Gene3D Glycogen Phosphorylase B; 73 331 - -
Tan05g0748 865 Gene3D Glycogen Phosphorylase B; 332 545 - -
Tan05g0748 865 FunFam Alpha,alpha-trehalose-phosphate synthase 330 544 - -
Tan05g0748 865 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 606 723 - -
Tan05g0748 865 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 82 563 - -
Tan05g0748 865 SUPERFAMILY HAD-like 607 855 IPR036412 -
Tan05g0748 865 NCBIfam trehalose-phosphatase 604 852 IPR003337 GO:0005992(InterPro)
Tan05g0748 865 CDD HAD_TPP 608 849 - -
Tan05g0748 865 Pfam Glycosyltransferase family 20 82 559 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Tan05g0748 865 NCBIfam HAD-IIB family hydrolase 609 813 IPR006379 -
Tan05g0748 865 Pfam Trehalose-phosphatase 610 844 IPR003337 GO:0005992(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0748 Tan-Chr5:5381250 Tan09g2228 Tan-Chr9:72247966 6.80E-220 dispersed
Tan02g0192 Tan-Chr2:1658752 Tan05g0748 Tan-Chr5:5381250 3.40E-248 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0748 K16055 - csv:101209914 858.211