Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0762 ATGGGTTGCCATTATTCCAAGCCTTCTGTTGATGAAGATGGACAGAGCAAAGCCACTGAGAAATTTCCTTCACAAAAGACTCAACGAGTTAACTTATCTAGAAAAGAAGAGGATATGCGATTGAATTCTCTGAAAAGAGACGAAGATGTTCGAATAAATTCCTCACAGAGAGCTGATAGTATTCGATCAAGGGTGAAAACAGATGGAGGTGACTTGAAAGTTGCTTATTTGGATAGGAAAGTCAACGGCTCAAACAGAGTACATGATGATCAAATTGAGAAAAAGAAGAGGGAGAGGTTGGAAGCAGCCATTTCTGCTAATTATCCTGGGAAAGGAAGCATCCCAAAGGCTGTGGAAGCAGAGCAAGTTGCAGCTGGTTGGCCAAGTTGGCTCTCCTCTGTGGCCGGTGAAGCGCTCGAGGGATGGCTGCCACGAAAAGCCGAAACTTTCGAGAAACTAGACAAGATAGGACAAGGGACATATAGTAGTGTTTACAAGGCTCGTGATATCATTCATGGTAAACTAGTCGCTCTAAAACGAGTTCGATTCGATAATCTTGATGCAGAGAGTGTCAAGTTTATGGCCCGAGAAATCCTTATCCTACGTAGGCTTGATCATCCAAATGTTATAAAATTGGAAGGCTTGATTACGTCTCCACGATCATGTAGCTTGTACCTCGTTTTTGAGTATATGGAGCATGATCTTACGGGGCTCGCATCTCGGCCCGGTGTCAAGTTCAGCGAACCACAGGTTAAGTGCTATATGCAACAACTTCTAAGGGGACTTGATTATTGCCACAGTCGTGGTGTCCTCCACCGTGATATAAAGGGTTCAAACCTCCTCATCGACGACAATGGTATCTTGAAGATTGCAGATTTTGGATTAGCAAGTCCCTTTGACCCTCGTAATCGTGTTCCCCTGACAAGTCGTGTAGTGACTCTATGGTACCGACCACCCGAACTTCTGCTTGGAGCTTCCCATTATGGGGTTGCAGTGGACCTGTGGAGTACTGGTTGCATACTAGCTGAGCTATATGCTGGGAAGCCTATCTTGCCAGGAAAAACTGAGGTCGAACAGTTGCATAAGATATTTAAACTTTGTGGATCGCCACCTGAGGATTATTGGAGGAAATTGCAGTTACCTCATTCAACTGGATTCAAGACGGCTCAGCCATACCGACGTTGTATCGGAGAAATGCTCAAGGATTTCCCATCTGCTGTGGTCGCTCTTGTGGATAAGTTGCTTTCTGTAGATCCTGCTGATCGAGGAACCGCAGCTGCTGCTCTAAAGAGTGAGTTTTTTACGTCCAAACCTCTCGCTTGCGAACCTTCGAGTTTACCTAAATATCCTCCCAGCAAAGAGATTGATGCAAAATTCCAAGGCTGTAGAAGGCAGTCAAGAGTTGAGGGCAAAGACCCTAAAGATTCTGTGGAAGGAAGGCGATCTAAAGAAGCACACATTAATCTTTCTCTGAATGCCAAGGATGAAGCAAGCATGTTAATGCAGAAAAGGCAAGGTCATTCAAGTTTGAAGGGCCGGAGCGGAGTATTCAATCCGCGCGGGGACGAAACAGTTTCTGGTTTCTTGATTCCTCCACCCAAACAAAACCAATCTGTCACAGAAATTTGCTCTGATACAGGCAGGATTTCACATTCAGGGCCCCTAATTAGCAAACCAGATTGGATGAAATCTGGAAAGCAACTCGATGACCATTCGATGGCGCTTGACAGATCCAATCTCGCAGTTTTATCCTGTTTAGTAGCAACAAGGTCTAATACATCTGATCATCCCTATGATAGACCTGGCCCGTCACGATCAGAAGTAGGCAGATTGCCTGACTTCGTTAGGGAGTCGGAGTCATCGAGAAAGCAGGACCGAATATTTTATACACACCGAGTTGCAGATTCATACCGAATGGAGAACGAAAAAGCCTGTGCTAAAGAACAGTCTCTGTTTGCTCATGGGACAGACATGAACAAGCTTTACACTTCTGGTCCAATCCTTGGTCCATCAAACAACTTAGATAAAATTCTGAAAGAGCGAGACCGTCAGATTCAAGAATACGCTCGACAAGCACGACACGGTAAAGCTGGTAACAATCAGTTGAAGGGTGCAAGAACAACAACTGGAAAACATCTCATGTCGAGCTATGGCATGTAA 2160 44.95 MGCHYSKPSVDEDGQSKATEKFPSQKTQRVNLSRKEEDMRLNSLKRDEDVRINSSQRADSIRSRVKTDGGDLKVAYLDRKVNGSNRVHDDQIEKKKRERLEAAISANYPGKGSIPKAVEAEQVAAGWPSWLSSVAGEALEGWLPRKAETFEKLDKIGQGTYSSVYKARDIIHGKLVALKRVRFDNLDAESVKFMAREILILRRLDHPNVIKLEGLITSPRSCSLYLVFEYMEHDLTGLASRPGVKFSEPQVKCYMQQLLRGLDYCHSRGVLHRDIKGSNLLIDDNGILKIADFGLASPFDPRNRVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSTGCILAELYAGKPILPGKTEVEQLHKIFKLCGSPPEDYWRKLQLPHSTGFKTAQPYRRCIGEMLKDFPSAVVALVDKLLSVDPADRGTAAAALKSEFFTSKPLACEPSSLPKYPPSKEIDAKFQGCRRQSRVEGKDPKDSVEGRRSKEAHINLSLNAKDEASMLMQKRQGHSSLKGRSGVFNPRGDETVSGFLIPPPKQNQSVTEICSDTGRISHSGPLISKPDWMKSGKQLDDHSMALDRSNLAVLSCLVATRSNTSDHPYDRPGPSRSEVGRLPDFVRESESSRKQDRIFYTHRVADSYRMENEKACAKEQSLFAHGTDMNKLYTSGPILGPSNNLDKILKERDRQIQEYARQARHGKAGNNQLKGARTTTGKHLMSSYGM 719
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5558954 5563058 - Tan0010154.1 Tan05g0762 752070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0762 719 MobiDBLite consensus disorder prediction 591 622 - -
Tan05g0762 719 ProSitePatterns Protein kinases ATP-binding region signature. 156 179 IPR017441 GO:0005524(InterPro)
Tan05g0762 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0762 719 ProSiteProfiles Protein kinase domain profile. 150 434 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0762 719 FunFam probable serine/threonine-protein kinase At1g54610 137 232 - -
Tan05g0762 719 MobiDBLite consensus disorder prediction 30 62 - -
Tan05g0762 719 MobiDBLite consensus disorder prediction 457 485 - -
Tan05g0762 719 CDD STKc_CDK9_like 150 434 - -
Tan05g0762 719 PANTHER CELL DIVISION PROTEIN KINASE 149 434 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Tan05g0762 719 SUPERFAMILY Protein kinase-like (PK-like) 145 439 IPR011009 -
Tan05g0762 719 Gene3D Transferase(Phosphotransferase) domain 1 233 473 - -
Tan05g0762 719 MobiDBLite consensus disorder prediction 701 719 - -
Tan05g0762 719 MobiDBLite consensus disorder prediction 691 719 - -
Tan05g0762 719 Pfam Protein kinase domain 150 434 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0762 719 Gene3D Phosphorylase Kinase; domain 1 137 232 - -
Tan05g0762 719 SMART serkin_6 150 434 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0762 719 MobiDBLite consensus disorder prediction 452 485 - -
Tan05g0762 719 FunFam probable serine/threonine-protein kinase At1g54610 233 472 - -
Tan05g0762 719 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0808 Tan-Chr1:7857122 Tan05g0762 Tan-Chr5:5558954 2.10E-203 dispersed
Tan05g0762 Tan-Chr5:5558954 Tan05g0764 Tan-Chr5:5558954 0.00E+00 dispersed
Tan05g0762 Tan-Chr5:5558954 Tan05g0763 Tan-Chr5:5558954 8.1e-312 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67589 PF00069 Pkinase 1.30E-67 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0762 - - - 0.0