Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0763 ATGGCCCGAGAAATCCTTATCCTACGTAGGCTTGATCATCCAAATGTTATAAAATTGGAAGGCTTGATTACGTCTCCACGATCATGTAGCTTGTACCTCGTTTTTGAGTATATGGAGCATGATCTTACGGGGCTCGCATCTCGGCCCGGTGTCAAGTTCAGCGAACCACAGGTTAAGTGCTATATGCAACAACTTCTAAGGGGACTTGATTATTGCCACAGTCGTGGTGTCCTCCACCGTGATATAAAGGGTTCAAACCTCCTCATCGACGACAATGGTATCTTGAAGATTGCAGATTTTGGATTAGCAAGTCCCTTTGACCCTCGTAATCGTGTTCCCCTGACAAGTCGTGTAGTGACTCTATGGTACCGACCACCCGAACTTCTGCTTGGAGCTTCCCATTATGGGGTTGCAGTGGACCTGTGGAGTACTGGTTGCATACTAGCTGAGCTATATGCTGGGAAGCCTATCTTGCCAGGAAAAACTGAGGTCGAACAGTTGCATAAGATATTTAAACTTTGTGGATCGCCACCTGAGGATTATTGGAGGAAATTGCAGTTACCTCATTCAACTGGATTCAAGACGGCTCAGCCATACCGACGTTGTATCGGAGAAATGCTCAAGGATTTCCCATCTGCTGTGGTCGCTCTTGTGGATAAGTTGCTTTCTGTAGATCCTGCTGATCGAGGAACCGCAGCTGCTGCTCTAAAGAGTGAGTTTTTTACGTCCAAACCTCTCGCTTGCGAACCTTCGAGTTTACCTAAATATCCTCCCAGCAAAGAGATTGATGCAAAATTCCAAGGCTGTAGAAGGCAGTCAAGAGTTGAGGGCAAAGACCCTAAAGATTCTGTGGAAGGAAGGCGATCTAAAGAAGCACACATTAATCTTTCTCTGAATGCCAAGGATGAAGCAAGCATGTTAATGCAGAAAAGGCAAGGTCATTCAAGTTTGAAGGGCCGGAGCGGAGTATTCAATCCGCGCGGGGACGAAACAGTTTCTGGTTTCTTGATTCCTCCACCCAAACAAAACCAATCTGTCACAGAAATTTGCTCTGATACAGGCAGGATTTCACATTCAGGGCCCCTAATTAGCAAACCAGATTGGATGAAATCTGGAAAGCAACTCGATGACCATTCGATGGCGCTTGACAGATCCAATCTCGCAGTTTTATCCTGTTTAGTAGCAACAAGGTCTAATACATCTGATCATCCCTATGATAGACCTGGCCCGTCACGATCAGAAGTAGGCAGATTGCCTGACTTCGTTAGGGAGTCGGAGTCATCGAGAAAGCAGGACCGAATATTTTATACACACCGAGTTGCAGATTCATACCGAATGGAGAACGAAAAAGCCTGTGCTAAAGAACAGTCTCTGTTTGCTCATGGGACAGACATGAACAAGCTTTACACTTCTGGTCCAATCCTTGGTCCATCAAACAACTTAGATAAAATTCTGAAAGAGCGAGACCGTCAGATTCAAGAATACGCTCGACAAGCACGACACGGTAAAGCTGGTAACAATCAGTTGAAGGGTGCAAGAACAACAACTGGAAAACATCTCATGTCGAGCTATGGCATGTAA 1581 45.6 MAREILILRRLDHPNVIKLEGLITSPRSCSLYLVFEYMEHDLTGLASRPGVKFSEPQVKCYMQQLLRGLDYCHSRGVLHRDIKGSNLLIDDNGILKIADFGLASPFDPRNRVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSTGCILAELYAGKPILPGKTEVEQLHKIFKLCGSPPEDYWRKLQLPHSTGFKTAQPYRRCIGEMLKDFPSAVVALVDKLLSVDPADRGTAAAALKSEFFTSKPLACEPSSLPKYPPSKEIDAKFQGCRRQSRVEGKDPKDSVEGRRSKEAHINLSLNAKDEASMLMQKRQGHSSLKGRSGVFNPRGDETVSGFLIPPPKQNQSVTEICSDTGRISHSGPLISKPDWMKSGKQLDDHSMALDRSNLAVLSCLVATRSNTSDHPYDRPGPSRSEVGRLPDFVRESESSRKQDRIFYTHRVADSYRMENEKACAKEQSLFAHGTDMNKLYTSGPILGPSNNLDKILKERDRQIQEYARQARHGKAGNNQLKGARTTTGKHLMSSYGM 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5558954 5563058 - Tan0010154.2 Tan05g0763 752071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0763 526 MobiDBLite consensus disorder prediction 498 526 - -
Tan05g0763 526 MobiDBLite consensus disorder prediction 264 292 - -
Tan05g0763 526 Gene3D Transferase(Phosphotransferase) domain 1 40 280 - -
Tan05g0763 526 MobiDBLite consensus disorder prediction 398 429 - -
Tan05g0763 526 FunFam Putative serine threonine-protein kinase 1 44 - -
Tan05g0763 526 MobiDBLite consensus disorder prediction 508 526 - -
Tan05g0763 526 Pfam Protein kinase domain 2 241 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0763 526 PANTHER CELL DIVISION PROTEIN KINASE 1 241 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Tan05g0763 526 MobiDBLite consensus disorder prediction 259 292 - -
Tan05g0763 526 ProSiteProfiles Protein kinase domain profile. 1 241 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0763 526 FunFam probable serine/threonine-protein kinase At1g54610 40 279 - -
Tan05g0763 526 SMART serkin_6 1 241 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0763 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 77 89 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0763 526 SUPERFAMILY Protein kinase-like (PK-like) 2 246 IPR011009 -
Tan05g0763 526 Gene3D Phosphorylase Kinase; domain 1 1 39 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0763 Tan-Chr5:5558954 Tan11g2116 Tan-Chr11:50229547 1.60E-126 dispersed
Tan05g0762 Tan-Chr5:5558954 Tan05g0763 Tan-Chr5:5558954 8.1e-312 tandem
Tan05g0763 Tan-Chr5:5558954 Tan05g0764 Tan-Chr5:5558954 5.10E-271 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67590 PF00069 Pkinase 8.40E-57 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0763 - - - 0.0