Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0764 ATGGGTTGCCATTATTCCAAGCCTTCTGTTGATGAAGATGGACAGAGCAAAGCCACTGAGAAATTTCCTTCACAAAAGACTCAACGAGTTAACTTATCTAGAAAAGAAGAGGATATGCGATTGAATTCTCTGAAAAGAGACGAAGATGTTCGAATAAATTCCTCACAGAGAGCTGATAGTATTCGATCAAGGGTGAAAACAGATGGAGGTGACTTGAAAGTTGCTTATTTGGATAGGAAAGTCAACGGCTCAAACAGAGTACATGATGATCAAATTGAGAAAAAGAAGAGGGAGAGGTTGGAAGCAGCCATTTCTGCTAATTATCCTGGGAAAGGAAGCATCCCAAAGGCTGTGGAAGCAGAGCAAGTTGCAGCTGGTTGGCCAAGTTGGCTCTCCTCTGTGGCCGGTGAAGCGCTCGAGGGATGGCTGCCACGAAAAGCCGAAACTTTCGAGAAACTAGACAAGATAGGACAAGGGACATATAGTAGTGTTTACAAGGCTCGTGATATCATTCATGGTAAACTAGTCGCTCTAAAACGAGTTCGATTCGATAATCTTGATGCAGAGAGTGTCAAGTTTATGGCCCGAGAAATCCTTATCCTACGTAGGCTTGATCATCCAAATGTTATAAAATTGGAAGGCTTGATTACGTCTCCACGATCATGTAGCTTGTACCTCGTTTTTGAGTATATGGAGCATGATCTTACGGGGCTCGCATCTCGGCCCGGTGTCAAGTTCAGCGAACCACAGGTTAAGTGCTATATGCAACAACTTCTAAGGGGACTTGATTATTGCCACAGTCGTGGTGTCCTCCACCGTGATATAAAGGGTTCAAACCTCCTCATCGACGACAATGGTATCTTGAAGATTGCAGATTTTGGATTAGCAAGTCCCTTTGACCCTCGTAATCGTGTTCCCCTGACAAGTCGTGTAGTGACTCTATGGTACCGACCACCCGAACTTCTGCTTGGAGCTTCCCATTATGGGGTTGCAGTGGACCTGTGGAGTACTGGTTGCATACTAGCTGAGCTATATGCTGGGAAGCCTATCTTGCCAGGAAAAACTGAGGTCGAACAGTTGCATAAGATATTTAAACTTTGTGGATCGCCACCTGAGGATTATTGGAGGAAATTGCAGTTACCTCATTCAACTGGATTCAAGACGGCTCAGCCATACCGACGTTGTATCGGAGAAATGCTCAAGGATTTCCCATCTGCTGTGGTCGCTCTTGTGGATAAGTTGCTTTCTGTAGATCCTGCTGATCGAGGAACCGCAGCTGCTGCTCTAAAGAGTGAGTTTTTTACGTCCAAACCTCTCGCTTGCGAACCTTCGAGTTTACCTAAATATCCTCCCAGCAAAGAGATTGATGCAAAATTCCAAGGCTGTAGAAGGCAGTCAAGAGTTGAGGGCAAAGACCCTAAAGATTCTGTGGAAGGAAGGCGATCTAAAGAAGCACACATTAATCTTTCTCTGAATGCCAAGGATGAAGCAAGCATGTTAATGCAGAAAAGGCAAGGTCATTCAAGTTTGAAGGGCCGGAGCGGAGTATTCAATCCGCGCGGGGACGAAACAGTTTCTGGTTTCTTGATTCCTCCACCCAAACAAAACCAATCTGTCACAGAAATTTGCTCTGATACAGGCAGGATTTCACATTCAGGGCCCCTAATTAGCAAACCAGATTGGATGAAATCTGGAAAGCAACTCGATGACCATTCGATGGCGCTTGACAGATCCAATCTCGCAGTTTTATCCTGTTTAGTAGCAACAAGGTCTAATACATCTGATCATCCCTATGATAGACCTGGCCCGTCACGATCAGAAGTAGGCAGATTGCCTGACTTCGTTAGGGAGTCGGAGTCATCGAGAAAGCAGGACCGAATATTTTATACACACCGAGTTGCAGATTCATACCGAATGGAGAACGAAAAAGCCTGTGCTAAAGAACAGTCTCTGGTTCGTTCCTTCTTTCCTCTTGTTAAGGTTACATGA 1989 45.05 MGCHYSKPSVDEDGQSKATEKFPSQKTQRVNLSRKEEDMRLNSLKRDEDVRINSSQRADSIRSRVKTDGGDLKVAYLDRKVNGSNRVHDDQIEKKKRERLEAAISANYPGKGSIPKAVEAEQVAAGWPSWLSSVAGEALEGWLPRKAETFEKLDKIGQGTYSSVYKARDIIHGKLVALKRVRFDNLDAESVKFMAREILILRRLDHPNVIKLEGLITSPRSCSLYLVFEYMEHDLTGLASRPGVKFSEPQVKCYMQQLLRGLDYCHSRGVLHRDIKGSNLLIDDNGILKIADFGLASPFDPRNRVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSTGCILAELYAGKPILPGKTEVEQLHKIFKLCGSPPEDYWRKLQLPHSTGFKTAQPYRRCIGEMLKDFPSAVVALVDKLLSVDPADRGTAAAALKSEFFTSKPLACEPSSLPKYPPSKEIDAKFQGCRRQSRVEGKDPKDSVEGRRSKEAHINLSLNAKDEASMLMQKRQGHSSLKGRSGVFNPRGDETVSGFLIPPPKQNQSVTEICSDTGRISHSGPLISKPDWMKSGKQLDDHSMALDRSNLAVLSCLVATRSNTSDHPYDRPGPSRSEVGRLPDFVRESESSRKQDRIFYTHRVADSYRMENEKACAKEQSLVRSFFPLVKVT 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5558954 5563058 - Tan0010154.3 Tan05g0764 752072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0764 662 FunFam probable serine/threonine-protein kinase At1g54610 137 232 - -
Tan05g0764 662 MobiDBLite consensus disorder prediction 592 619 - -
Tan05g0764 662 SUPERFAMILY Protein kinase-like (PK-like) 145 439 IPR011009 -
Tan05g0764 662 Pfam Protein kinase domain 150 434 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0764 662 ProSitePatterns Protein kinases ATP-binding region signature. 156 179 IPR017441 GO:0005524(InterPro)
Tan05g0764 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0764 662 ProSiteProfiles Protein kinase domain profile. 150 434 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0764 662 MobiDBLite consensus disorder prediction 30 62 - -
Tan05g0764 662 MobiDBLite consensus disorder prediction 457 485 - -
Tan05g0764 662 CDD STKc_CDK9_like 150 434 - -
Tan05g0764 662 Gene3D Phosphorylase Kinase; domain 1 137 232 - -
Tan05g0764 662 FunFam probable serine/threonine-protein kinase At1g54610 233 472 - -
Tan05g0764 662 SMART serkin_6 150 434 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0764 662 MobiDBLite consensus disorder prediction 452 485 - -
Tan05g0764 662 PANTHER CELL DIVISION PROTEIN KINASE 149 434 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Tan05g0764 662 Gene3D Transferase(Phosphotransferase) domain 1 233 473 - -
Tan05g0764 662 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0762 Tan-Chr5:5558954 Tan05g0764 Tan-Chr5:5558954 0.00E+00 dispersed
Tan05g0764 Tan-Chr5:5558954 Tan10g0948 Tan-Chr10:8276276 3.10E-164 dispersed
Tan05g0763 Tan-Chr5:5558954 Tan05g0764 Tan-Chr5:5558954 5.10E-271 tandem
Tan05g0764 Tan-Chr5:5558954 Tan05g0765 Tan-Chr5:5567601 3.50E-168 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67591 PF00069 Pkinase 1.10E-67 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0764 - - - 0.0