Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g0764 | ATGGGTTGCCATTATTCCAAGCCTTCTGTTGATGAAGATGGACAGAGCAAAGCCACTGAGAAATTTCCTTCACAAAAGACTCAACGAGTTAACTTATCTAGAAAAGAAGAGGATATGCGATTGAATTCTCTGAAAAGAGACGAAGATGTTCGAATAAATTCCTCACAGAGAGCTGATAGTATTCGATCAAGGGTGAAAACAGATGGAGGTGACTTGAAAGTTGCTTATTTGGATAGGAAAGTCAACGGCTCAAACAGAGTACATGATGATCAAATTGAGAAAAAGAAGAGGGAGAGGTTGGAAGCAGCCATTTCTGCTAATTATCCTGGGAAAGGAAGCATCCCAAAGGCTGTGGAAGCAGAGCAAGTTGCAGCTGGTTGGCCAAGTTGGCTCTCCTCTGTGGCCGGTGAAGCGCTCGAGGGATGGCTGCCACGAAAAGCCGAAACTTTCGAGAAACTAGACAAGATAGGACAAGGGACATATAGTAGTGTTTACAAGGCTCGTGATATCATTCATGGTAAACTAGTCGCTCTAAAACGAGTTCGATTCGATAATCTTGATGCAGAGAGTGTCAAGTTTATGGCCCGAGAAATCCTTATCCTACGTAGGCTTGATCATCCAAATGTTATAAAATTGGAAGGCTTGATTACGTCTCCACGATCATGTAGCTTGTACCTCGTTTTTGAGTATATGGAGCATGATCTTACGGGGCTCGCATCTCGGCCCGGTGTCAAGTTCAGCGAACCACAGGTTAAGTGCTATATGCAACAACTTCTAAGGGGACTTGATTATTGCCACAGTCGTGGTGTCCTCCACCGTGATATAAAGGGTTCAAACCTCCTCATCGACGACAATGGTATCTTGAAGATTGCAGATTTTGGATTAGCAAGTCCCTTTGACCCTCGTAATCGTGTTCCCCTGACAAGTCGTGTAGTGACTCTATGGTACCGACCACCCGAACTTCTGCTTGGAGCTTCCCATTATGGGGTTGCAGTGGACCTGTGGAGTACTGGTTGCATACTAGCTGAGCTATATGCTGGGAAGCCTATCTTGCCAGGAAAAACTGAGGTCGAACAGTTGCATAAGATATTTAAACTTTGTGGATCGCCACCTGAGGATTATTGGAGGAAATTGCAGTTACCTCATTCAACTGGATTCAAGACGGCTCAGCCATACCGACGTTGTATCGGAGAAATGCTCAAGGATTTCCCATCTGCTGTGGTCGCTCTTGTGGATAAGTTGCTTTCTGTAGATCCTGCTGATCGAGGAACCGCAGCTGCTGCTCTAAAGAGTGAGTTTTTTACGTCCAAACCTCTCGCTTGCGAACCTTCGAGTTTACCTAAATATCCTCCCAGCAAAGAGATTGATGCAAAATTCCAAGGCTGTAGAAGGCAGTCAAGAGTTGAGGGCAAAGACCCTAAAGATTCTGTGGAAGGAAGGCGATCTAAAGAAGCACACATTAATCTTTCTCTGAATGCCAAGGATGAAGCAAGCATGTTAATGCAGAAAAGGCAAGGTCATTCAAGTTTGAAGGGCCGGAGCGGAGTATTCAATCCGCGCGGGGACGAAACAGTTTCTGGTTTCTTGATTCCTCCACCCAAACAAAACCAATCTGTCACAGAAATTTGCTCTGATACAGGCAGGATTTCACATTCAGGGCCCCTAATTAGCAAACCAGATTGGATGAAATCTGGAAAGCAACTCGATGACCATTCGATGGCGCTTGACAGATCCAATCTCGCAGTTTTATCCTGTTTAGTAGCAACAAGGTCTAATACATCTGATCATCCCTATGATAGACCTGGCCCGTCACGATCAGAAGTAGGCAGATTGCCTGACTTCGTTAGGGAGTCGGAGTCATCGAGAAAGCAGGACCGAATATTTTATACACACCGAGTTGCAGATTCATACCGAATGGAGAACGAAAAAGCCTGTGCTAAAGAACAGTCTCTGGTTCGTTCCTTCTTTCCTCTTGTTAAGGTTACATGA | 1989 | 45.05 | MGCHYSKPSVDEDGQSKATEKFPSQKTQRVNLSRKEEDMRLNSLKRDEDVRINSSQRADSIRSRVKTDGGDLKVAYLDRKVNGSNRVHDDQIEKKKRERLEAAISANYPGKGSIPKAVEAEQVAAGWPSWLSSVAGEALEGWLPRKAETFEKLDKIGQGTYSSVYKARDIIHGKLVALKRVRFDNLDAESVKFMAREILILRRLDHPNVIKLEGLITSPRSCSLYLVFEYMEHDLTGLASRPGVKFSEPQVKCYMQQLLRGLDYCHSRGVLHRDIKGSNLLIDDNGILKIADFGLASPFDPRNRVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSTGCILAELYAGKPILPGKTEVEQLHKIFKLCGSPPEDYWRKLQLPHSTGFKTAQPYRRCIGEMLKDFPSAVVALVDKLLSVDPADRGTAAAALKSEFFTSKPLACEPSSLPKYPPSKEIDAKFQGCRRQSRVEGKDPKDSVEGRRSKEAHINLSLNAKDEASMLMQKRQGHSSLKGRSGVFNPRGDETVSGFLIPPPKQNQSVTEICSDTGRISHSGPLISKPDWMKSGKQLDDHSMALDRSNLAVLSCLVATRSNTSDHPYDRPGPSRSEVGRLPDFVRESESSRKQDRIFYTHRVADSYRMENEKACAKEQSLVRSFFPLVKVT | 662 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 5558954 | 5563058 | - | Tan0010154.3 | Tan05g0764 | 752072 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g0764 | 662 | FunFam | probable serine/threonine-protein kinase At1g54610 | 137 | 232 | - | - | |
Tan05g0764 | 662 | MobiDBLite | consensus disorder prediction | 592 | 619 | - | - | |
Tan05g0764 | 662 | SUPERFAMILY | Protein kinase-like (PK-like) | 145 | 439 | IPR011009 | - | |
Tan05g0764 | 662 | Pfam | Protein kinase domain | 150 | 434 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g0764 | 662 | ProSitePatterns | Protein kinases ATP-binding region signature. | 156 | 179 | IPR017441 | GO:0005524(InterPro) | |
Tan05g0764 | 662 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 270 | 282 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan05g0764 | 662 | ProSiteProfiles | Protein kinase domain profile. | 150 | 434 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g0764 | 662 | MobiDBLite | consensus disorder prediction | 30 | 62 | - | - | |
Tan05g0764 | 662 | MobiDBLite | consensus disorder prediction | 457 | 485 | - | - | |
Tan05g0764 | 662 | CDD | STKc_CDK9_like | 150 | 434 | - | - | |
Tan05g0764 | 662 | Gene3D | Phosphorylase Kinase; domain 1 | 137 | 232 | - | - | |
Tan05g0764 | 662 | FunFam | probable serine/threonine-protein kinase At1g54610 | 233 | 472 | - | - | |
Tan05g0764 | 662 | SMART | serkin_6 | 150 | 434 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g0764 | 662 | MobiDBLite | consensus disorder prediction | 452 | 485 | - | - | |
Tan05g0764 | 662 | PANTHER | CELL DIVISION PROTEIN KINASE | 149 | 434 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Tan05g0764 | 662 | Gene3D | Transferase(Phosphotransferase) domain 1 | 233 | 473 | - | - | |
Tan05g0764 | 662 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g0762 | Tan-Chr5:5558954 | Tan05g0764 | Tan-Chr5:5558954 | 0.00E+00 | dispersed | |
Tan05g0764 | Tan-Chr5:5558954 | Tan10g0948 | Tan-Chr10:8276276 | 3.10E-164 | dispersed | |
Tan05g0763 | Tan-Chr5:5558954 | Tan05g0764 | Tan-Chr5:5558954 | 5.10E-271 | tandem | |
Tan05g0764 | Tan-Chr5:5558954 | Tan05g0765 | Tan-Chr5:5567601 | 3.50E-168 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67591 | PF00069 | Pkinase | 1.10E-67 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g0764 | - | - | - | 0.0 |