Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0765 ATGGGATGCATATGTTCTAAGGTTTTAGCGGATGAGTGTAGTAACCATGAACATGATAGCTCCAAAAGAGCTTATTCCGCCAGAAAACAGCTCTCTGAATTGAAAATTTCGAGAGCTGGCTCTCCGAAACCGGAGAAGATTTGGAAAAAAGATAGACTGGATTGTGGTGATGTTACGGTTATGTTGTTCGATACGAAGGCGAATGGTTCTCTGCGCTCACATGGTGAACTTCCTAATGAGAGGAAGAAGATAGAGATCCCTGATGTCACCATTTTCAATCAGCCATGTATGGGAAAGATTCCGAAGGTTACCGAGGCCGAGCAGGTTGCTGCTGGGTGGCCGAGTTGGCTGGCTGTGGTGGCTGGTGAGGCTATCAAAGGCTGGTTGCCAAAACGTGCAAATGACTTCATCAAGTTAGAAAAAATTGGCCAGGGAACTTACAGCAGTGTGTATAAAGCTCGTGATATCATTCAAGATAAAGTTGTGGCATTGAAAAGGGTCAGGTTTGACAATCAAGATACTGAGAGTATCAAGTTTATGGCAAGGGAAATCCTTGTTTTGCGAAGGCTTGATCATCCAAATATAGTTAAGTTGGAAGGGTTGATCACATCACAAACATCATGTACCATGTACCTTGTTTTTGAATATATGGAACATGATCTTACAGGGCTTGCATCTCGGCCTGGCACGTCATTCACCGAACCACAGATGAAGTGTTACATGAAGCAACTTTTGAGTGGACTTGATCACTGTCACCGTAATGGGGTTCTGCATCGAGACATAAAGGGCTCAAATCTTCTTATTGACAACAATGGCATTTTGAAGATAGCAGATTTTGGGTTGGCTGTTTTCTTTGATTCACAGTCAACGGTTCCCATGACGAGTCGTGTAATAACTCTCTGGTATCGACCTCCAGAACTTTTACTTGGAGCATCTCGATATGGAGTTGAAGTTGATTTATGGAGTGCTGGGTGCATTCTAGGAGAGTTATATGCTGGCAAACCTATCTTGCCAGGAAAAACAGAGGTTGAACAACTGCATAAAATATTTAAGCTATGTGGTTCCCCCACCAAGGAATATTGGAGCAAATTGCATTTGAAGCATTCAACAAGCATGAAGCCTCCACAATCATACGAAAGATGTTTTTGGGAAAGATTTAACGATTTTCCTCGTGCTGCTGTCGAGCTTATGGACACTTTGCTTTCTATAGATCCTGCAGGGCGAGGAACTGCAGCTTCGGCACTCGACAGTGAGTTCTTTACCACAAGGCCCTTACCGTCCGATCCTTCAAGTTTGCCAAAATACCCTCCCAGCAAAGAGATCGATTCAAAAATGCGCGAAGAGGAAGCAAGAAGGCAACGAGGAGTAGTTGGTGGAAGAAACCGGACAATTGACTCAGAAGCAAAAGGACTGAAGCAATCTTGGGTAGTTCCTTCAGCAAAGGCTAACGCTGAGTTGGTTATATCACTACTGAGAAAACAAAGTCGTTCCAGCTCGAAGTACCGGAGTGAAACGTGTCCTTACGGTTTGGTGTCCAAGCGAACCTCAAATTCAGGACCTATAACTCAGGGACCAAGATTTCCAAACTCCAAAAAGGAACCGAAACATGTTTCTATGATTCCGAGTGAGTATTTAACATCATCTGATCCTATTGAATTTGTTTCTTACAAACATGTCAAAGAAAGAAATGGAGTTTCAAAGCCAGAATCAATGAGTCAAGACAAAAATCCCCCTCTATCCAGCTCTGCAGAAGAGCTCATCAAAAAGCTGAACAGAGACCAACTTGAGATGAAGAAAAGTACAGATTCTTGTAAGTTGGAAGTGGAACATTCAAAAGCCTCAGCTCTGATAGTTAGCTAA 1860 43.01 MGCICSKVLADECSNHEHDSSKRAYSARKQLSELKISRAGSPKPEKIWKKDRLDCGDVTVMLFDTKANGSLRSHGELPNERKKIEIPDVTIFNQPCMGKIPKVTEAEQVAAGWPSWLAVVAGEAIKGWLPKRANDFIKLEKIGQGTYSSVYKARDIIQDKVVALKRVRFDNQDTESIKFMAREILVLRRLDHPNIVKLEGLITSQTSCTMYLVFEYMEHDLTGLASRPGTSFTEPQMKCYMKQLLSGLDHCHRNGVLHRDIKGSNLLIDNNGILKIADFGLAVFFDSQSTVPMTSRVITLWYRPPELLLGASRYGVEVDLWSAGCILGELYAGKPILPGKTEVEQLHKIFKLCGSPTKEYWSKLHLKHSTSMKPPQSYERCFWERFNDFPRAAVELMDTLLSIDPAGRGTAASALDSEFFTTRPLPSDPSSLPKYPPSKEIDSKMREEEARRQRGVVGGRNRTIDSEAKGLKQSWVVPSAKANAELVISLLRKQSRSSSKYRSETCPYGLVSKRTSNSGPITQGPRFPNSKKEPKHVSMIPSEYLTSSDPIEFVSYKHVKERNGVSKPESMSQDKNPPLSSSAEELIKKLNRDQLEMKKSTDSCKLEVEHSKASALIVS 619
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5567601 5571288 - Tan0012022.1 Tan05g0765 752073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0765 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0765 619 PANTHER CELL DIVISION PROTEIN KINASE 136 420 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Tan05g0765 619 MobiDBLite consensus disorder prediction 439 458 - -
Tan05g0765 619 SUPERFAMILY Protein kinase-like (PK-like) 131 427 IPR011009 -
Tan05g0765 619 Gene3D Phosphorylase Kinase; domain 1 123 218 - -
Tan05g0765 619 MobiDBLite consensus disorder prediction 509 536 - -
Tan05g0765 619 FunFam probable serine/threonine-protein kinase At1g54610 219 460 - -
Tan05g0765 619 ProSitePatterns Protein kinases ATP-binding region signature. 142 165 IPR017441 GO:0005524(InterPro)
Tan05g0765 619 ProSiteProfiles Protein kinase domain profile. 136 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0765 619 MobiDBLite consensus disorder prediction 421 458 - -
Tan05g0765 619 FunFam probable serine/threonine-protein kinase At1g54610 123 218 - -
Tan05g0765 619 SMART serkin_6 136 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0765 619 CDD STKc_CDK9_like 136 420 - -
Tan05g0765 619 Gene3D Transferase(Phosphotransferase) domain 1 219 458 - -
Tan05g0765 619 MobiDBLite consensus disorder prediction 562 584 - -
Tan05g0765 619 Pfam Protein kinase domain 138 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0765 619 MobiDBLite consensus disorder prediction 509 525 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0765 Tan-Chr5:5567601 Tan10g0948 Tan-Chr10:8276276 7.60E-157 dispersed
Tan05g0764 Tan-Chr5:5558954 Tan05g0765 Tan-Chr5:5567601 3.50E-168 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67592 PF00069 Pkinase 1.80E-67 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0765 - - - 0.0