Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0797 ATGGGGACCTGTTTGTCTACGGGCAATCAGTGTAGTTGCAATGGTGGAACCAATGGAGTGAGAGTTTCTGGATCCTGTTTGGGGATTGGAGTTTGTGGTCAGATTGAAAGAAAGAGAACATTCTCAGATCATATTTTTTCTCTGCAGCATTTGAATTCTATACCTAACAGACTTGTTTATAATGGGAAGACTCGAAATTCTTGCATTTTCACTCAGCAAGGTCGCAAGGGTATAAACCAGGATGCCATGGTTGTATGGGAAGACTTCATATCAGATGGTGCAATTTTCTGTGGGGTATTTGATGGTCATGGCCCGCATGGTCACGTCGTCGCACGGAAGGTTAGAGATGTTCTGCCAAGAAAGCTAGTGTCATTCTGGCAGTCATCTCAGTTGAAGCATAATAGATCGGATAGAACTTCTTGTCTCCGGCTGAGTCGGAAGAATTCAGCAGATGGTGAAGGACAGGACATGGATAGTTTACAGGAGGATAAATCGAGTTCTTTATGGAGAAGAGCTTTCCTCAAATCATATAAAGCCATGGATAAGGAGCTCAAGTCTCATCCCAAATTGGACTGTTTCTGTAGTGGCAGTACTGCGGTCACTCTAGTGAAGCAGGGCTCAGATCTATTTGTGGGAAGTATTGGGGATTCTCGAGCAATTCTTGGATCTAGAGACTGTAGCAATTCCCTTGTAGCAACCCAATTGACAGTAGATCTAAAGCCTGATTTGCCCAGAGAAGCTGAAAGGATAAAGAAGTGTAAAGGAAGAGTGTTTGCATTGCAAGATGAGCCAGAAGTGTCGAGAGTGTGGCTGCCATTTGACAACGCACCTGGATTGGCCATGGCTCGAGCGTTTGGTGACTTCTGTTTGAAGGACTATGGAGTTATCTCTATTCCCGAATTCTCACACCGCGTGCTTACAGATAATGATCTGTTTGTTGTCCTTGCTTCAGATGGGGTTTGGGACGTATTGAGCAATGAAGAGGTGGTTGAGATAGTATCTTCTGCCTCAACTCGATCATCAGCAGCCCGAATGGTGGTAGACTCGGCTGCTCGTGAATGGAAACTCAAGTACCCTACTTCGAAAATGGATGACTGTGCAGTTGTTTGCTTATTCTTGGACGGGAAAATAGATTCGGAATCAGAAAATGAAGAACAAGCTCCTGCAACTCTTCAAGCCAGTCAAATGGTTAACACTGCAGATGCAGATGAAGAGCAGAGGTCCGAGCCAAGTTTGGAAAGGAATTACACGGTTCGATCATCGGAAGAAAAGGACCAAATTGGAGGATTTCCTTCACATAGTGAAAAGAATGAAGAATCAATGTCTGCTGAAGATGAAAATTGGTTGGGACTGGAGGGTGTAACAAGAGTAAACTCTCTGGTTCATCTCCCTAGATTTTCTTGA 1404 44.23 MGTCLSTGNQCSCNGGTNGVRVSGSCLGIGVCGQIERKRTFSDHIFSLQHLNSIPNRLVYNGKTRNSCIFTQQGRKGINQDAMVVWEDFISDGAIFCGVFDGHGPHGHVVARKVRDVLPRKLVSFWQSSQLKHNRSDRTSCLRLSRKNSADGEGQDMDSLQEDKSSSLWRRAFLKSYKAMDKELKSHPKLDCFCSGSTAVTLVKQGSDLFVGSIGDSRAILGSRDCSNSLVATQLTVDLKPDLPREAERIKKCKGRVFALQDEPEVSRVWLPFDNAPGLAMARAFGDFCLKDYGVISIPEFSHRVLTDNDLFVVLASDGVWDVLSNEEVVEIVSSASTRSSAARMVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKIDSESENEEQAPATLQASQMVNTADADEEQRSEPSLERNYTVRSSEEKDQIGGFPSHSEKNEESMSAEDENWLGLEGVTRVNSLVHLPRFS 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6018331 6021510 + Tan0012973.1 Tan05g0797 752105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0797 467 CDD PP2Cc 72 373 IPR001932 -
Tan05g0797 467 SMART PP2C_4 55 371 IPR001932 -
Tan05g0797 467 Gene3D - 56 375 IPR036457 -
Tan05g0797 467 MobiDBLite consensus disorder prediction 384 401 - -
Tan05g0797 467 MobiDBLite consensus disorder prediction 137 161 - -
Tan05g0797 467 ProSiteProfiles PPM-type phosphatase domain profile. 66 373 IPR001932 -
Tan05g0797 467 MobiDBLite consensus disorder prediction 381 449 - -
Tan05g0797 467 PANTHER PROTEIN PHOSPHATASE 68 372 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan05g0797 467 FunFam probable protein phosphatase 2C 52 57 376 - -
Tan05g0797 467 SUPERFAMILY PP2C-like 59 375 IPR036457 -
Tan05g0797 467 Pfam Protein phosphatase 2C 150 351 IPR001932 -
Tan05g0797 467 MobiDBLite consensus disorder prediction 402 443 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0797 Tan-Chr5:6018331 Tan06g1621 Tan-Chr6:26746414 4.90E-108 dispersed
Tan02g0240 Tan-Chr2:2098199 Tan05g0797 Tan-Chr5:6018331 1.20E-189 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0797 - - - 0.0