Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0823 ATGTGCCTTCTTTCCCATCATTTTTTTTTTTTTTTACTTTCCCATTTGCAGTGCTGCCGTAACTGTAACATCGTTCCTCACTTGTCTTACCTCGCCGTCAATTATCTCGATCGTTTTTTCTCCTTTCAGGGAGTCCCGCAACCGAAGCCATGGGTCTTGAGGCTTCTTGCGGTTTCTTGTGTTTCTCTGGCTGCGAAAATGAAGCAAACAGAACATAATATCTTTGATTTTCAGGGGAATGAGGGATTCATCTTTGATCCCCAAACAGTCCACAGAATGGAAGTTCTCATCTTGGGAGCTCTTAAATGGAGAATGCGCTCAATCACTCCCTTCTCTTTTGTCCCCTTCTTCATTTCCCTCTTCAAACTCAGAGACCCACCATTCTTACAAGCCCTCAAAGCCAGGGCTACAGAGATCATCTTCATAGCTCAAAATGGGATTACGCTTTTGAAGTTCAAGCCGTCAGTAATAGCAGCATCAGCTCTGCTCTCAGCCTCACACGAGCTCTTCCCAATCCAATATCCTTGCTTCAGAACAGCAATTCTCAACTGTTCATATCTAAATAAAGAGGAAATGTTGGTGAAATGCTTCAAGGCAGTGCAGGAGATAGTAATAAATGGGTACGAAAGGGGATTGGAAATGGAACAGAGATCAGACACGGCGGGCAATGTGCTCGACCACCATTTTTCGAGCTCTGAAAGTGAAAACACGTTCATGGCCACAGGCAACTCCAGCCAAAAGAACAGAGCAGAGGATGGAAAGAAGAGAAAAGTTGTTGTTGGGTACTGCAAGAATCCGACGGTCCAAGCAATGTTGATGAGATGA 825 44.48 MCLLSHHFFFFLLSHLQCCRNCNIVPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTEHNIFDFQGNEGFIFDPQTVHRMEVLILGALKWRMRSITPFSFVPFFISLFKLRDPPFLQALKARATEIIFIAQNGITLLKFKPSVIAASALLSASHELFPIQYPCFRTAILNCSYLNKEEMLVKCFKAVQEIVINGYERGLEMEQRSDTAGNVLDHHFSSSESENTFMATGNSSQKNRAEDGKKRKVVVGYCKNPTVQAMLMR 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6265866 6267934 + Tan0005207.2 Tan05g0823 752131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0823 274 Gene3D - 16 106 - -
Tan05g0823 274 Pfam Cyclin, C-terminal domain 109 205 IPR004367 -
Tan05g0823 274 SMART cyclin_7 7 99 IPR013763 -
Tan05g0823 274 SUPERFAMILY Cyclin-like 89 203 IPR036915 -
Tan05g0823 274 SMART Cyclin_C_2 108 241 IPR004367 -
Tan05g0823 274 MobiDBLite consensus disorder prediction 233 247 - -
Tan05g0823 274 SUPERFAMILY Cyclin-like 16 105 IPR036915 -
Tan05g0823 274 FunFam D6-type cyclin 104 198 - -
Tan05g0823 274 PANTHER CYCLINS 17 202 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Tan05g0823 274 Gene3D - 107 170 - -
Tan05g0823 274 CDD CYCLIN_AtCycD-like_rpt2 108 200 - -
Tan05g0823 274 Pfam Cyclin, N-terminal domain 17 106 IPR006671 -
Tan05g0823 274 FunFam D6-type cyclin 11 103 - -
Tan05g0823 274 MobiDBLite consensus disorder prediction 233 253 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0822 Tan-Chr5:6265866 Tan05g0823 Tan-Chr5:6265866 4.80E-147 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0823 K18812 - csv:101212222 395.586