Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0835 ATGCTCTTCTCTGTAATGGAAAACAAGGAGGGTAGCAGCTTTCACCGTTTCATGATCTCCAATTTATGCATCTTGTTTTTACTATTATCTTCATCCTTTGTAGAGAGTGTCGACATATTAAGAGACAGCAATGGAGATTCTATTGTTTCGGAGGGAGGAAGATTTGAACTTGGTTTTTTCACTCCGGAGGGAATCTCAAAGGCTAGAAGATACGTTGGAATATGGTTCCACGGTTCGAAACCGCGAATCGTTGTGTGGGTTGCCAATAGAAACCGACCACTATCCAACAACGATGGAATTTTTGCCATCATAGGGGGCAACCTCAAGGTATTAGCATCAAACAACATTTCTTTATGGTCTACCGACCTCCAATTCTCTTCTAACAACACAACAATGGAGCTGATGGCTTCTGGGAATTTAATTCTCAAGGAATTACGCATCAACGGTACAACTCTGTGGCAAAGCTTCCAAAATCCAACCGATACATTTCTTCCGGGCATGAACATGACCGACGACTTGAAATTGACTTCTTGGAAAAGTTCAAACGACCCATCGCCTGGGAATTTCACATTTCTCAAGGATACGGGCAGCCGCTACATCATCGAGAGACTTAGTTCACAATACTGGGTGAGCAAGGGACTATGGCAAAATTTCTCATCGGAAACAGATGGAGAGATTGCCGAAGTAATAGACTTATTGTCAAAAATTAGTGTCAGTGACTTGAGGGCCACCAACTACATCATTAGTTTTCAAGATCAAAAGCTGGATTACAACTATACAAGAGCAGTTATGGATTTCAAAGGGGAGTTACAGTACCTTGCAAGAAATAGAGTGACTGGAAAATGGGATGTCATCTGGTCAGAACCCAAAAGCATATGTAGCGTGGTAACAGCTTGTGGGGCCTTTGCTAGATGTCGGAGTGACACTAAACACACTTGTAAGTGCTTGCCTGGGTTTGAGCCCAAGTCCAAGGATGAATGGGATTCTGGTGATTACTCGCATGGGTGCCAGAGAAAAACAGAAATTTGCCTCAAAGAAGTGACTCAGATTGAAGATTTCTTGACAATTAAAATGAAGGTAAGAAAGACGTCTAATATCGTCAAGGTTGATAATAATAAAAATTGCAGAACCAAGTGCCTCGAATCTTGTACATGTCAGGCGTATTCAGAAGTAACAACCAACAATAGAAATGACGATACTGTGGCATGTGTCATTTGGGACGATGAACTCCAGAACATTTGGGATAATGTACCTGTTATTGGTGATAATGTCAACGTCCGTTTAAAACATTCTGACATTGAATATACAAAGCTTGACTGTGAAGCATGTGGAAGCAACATCGTCCCTTATCCTCTGACCACAGGTCCCAACTGCGGTGATCCTATGTATCGTAACTTTTTTTGTTTCGATATTTTTGGGGTCGTCTTCCTTGAAACAGCAGATTCTTTCTACATTGTCACGAACATCGATCCACAACTAAAAACTTTTACCATTGCAACAAACGGGTCTATCTGCAGAGGTAATGATACAGATGCAATTCAGAAGCTACTGAAATTGAAACACTCGTCTACATTCAAAGTAAGGGGCGGCTGTGACTCTGAATTTAATGAAATTGATATTCAATGGGAGAAACCGTTAGAGCCAATCTGCAATTCATCAAAAGATTGCACCAACTGGCCGAATTCATTATGCAACTCATCAACAGATGGAACAAGGAGGTGCTTGTGCAATCCTTCTTTTAACTGGACTGGCACCGATTGTCGTATTCCTTCAGAGGATGGTTTGAATCAACTACATCCAAAGAAGAATATCAGAGTTGATGTCATTGTCCCGGTGACCATTGCTGGATTCATTGTTATTTCCTGCTTGGTGTTGTATATTTACTACAAAAGACGGAAGGCTCAAAATAAAAAAGCAAGTTTTTGGAGAAATCAGGAAACTATTCACTTGTACGAGAGTGAAAAACGTGTTAGAGACTTTATGGATTCTGAAATGTTTGGAGAAGATGATAGAAAAGCCATAGAAGTACCAAATTTTGATTTGGAAACCATACTCAGTGCTACAGACCACTTCTCAGAAGCAAATAAAATTGGACGAGGAGGATTCGGAACAGTTTACAAGGGAGTTTTTCCAGGAGGACTGGAAATTGCAATAAAGAGGCTGTCGAAAGGTTCCACGCAAGGCGTAGAAGAGTTTCAGAATGAAGCTATTCTCATTGCAAAGCTTCAGCATCGAAATCTCGTTAGACTTTTGGGCTATTATGTTGGAGGAGAAGAAAAAATGTTGGTCTATGAATATATGCCCAACAAAAGCTTAGACTTTTTTATATTTGGCAAAAAACTTTTCCAAACTTTTTCTTCTCTTTTGCTAGATCAAACACAACGTTTATTGGTGAACTGGGAGATGCGATTTAATATCATAGTGGGAATTGTTCGAGGGCTAGTTTATCTCCATGAAGATTCAAGATTGAGAATTATTCATAGAGATATGAAAACAAGCAACATTCTATTAGACGCAGAAATGAATCCTAAAATTTCTGACTTTGGTTTAGCAAGAATCTTTGATGGGAAGCAAACAGAGGCAACCACCAACAGAGTTGTTGGAACTTATGGGTACATGTCACCAGAATATGCGTTAGATGGATCATTCTCTGTCAAATCTGATGTGTTCAGTTTTGGAATAGTTGTGCTGGAGATTGTGAGTGGAAGAAGGAACACTGGCTTCTACCAGTCGAAAGAAGCCTTGAACCTTGTTGGATACGTATGGAAGCTGTGGAGAGAAAACAGAGCATTGGAAATAGCAGAGGGGGCCATAAGGGAAAGCTGCAATCCAAATGAAGTTGTGAAATGTGTGGTTGTGGGTTTGTTGTGTGTACAAGAAGACCCCAACGAACGTCCAACAATGTCGGATGTAGCTTTTATGCTAAGCTCTGGTAGTGATCCCTCTTCTCTTCCAGATCCTAAACATCCAGCTTTCGTTGATAAAAAATCAACTCCTACTTCTTCTTCTTCTGCAACTTCTTCTTTGGGTTTCAAGCAAGAAATTGTAAGCAATGATTTTTCCTTACTTGAGCCTCGTTGA 3081 40.34 MLFSVMENKEGSSFHRFMISNLCILFLLLSSSFVESVDILRDSNGDSIVSEGGRFELGFFTPEGISKARRYVGIWFHGSKPRIVVWVANRNRPLSNNDGIFAIIGGNLKVLASNNISLWSTDLQFSSNNTTMELMASGNLILKELRINGTTLWQSFQNPTDTFLPGMNMTDDLKLTSWKSSNDPSPGNFTFLKDTGSRYIIERLSSQYWVSKGLWQNFSSETDGEIAEVIDLLSKISVSDLRATNYIISFQDQKLDYNYTRAVMDFKGELQYLARNRVTGKWDVIWSEPKSICSVVTACGAFARCRSDTKHTCKCLPGFEPKSKDEWDSGDYSHGCQRKTEICLKEVTQIEDFLTIKMKVRKTSNIVKVDNNKNCRTKCLESCTCQAYSEVTTNNRNDDTVACVIWDDELQNIWDNVPVIGDNVNVRLKHSDIEYTKLDCEACGSNIVPYPLTTGPNCGDPMYRNFFCFDIFGVVFLETADSFYIVTNIDPQLKTFTIATNGSICRGNDTDAIQKLLKLKHSSTFKVRGGCDSEFNEIDIQWEKPLEPICNSSKDCTNWPNSLCNSSTDGTRRCLCNPSFNWTGTDCRIPSEDGLNQLHPKKNIRVDVIVPVTIAGFIVISCLVLYIYYKRRKAQNKKASFWRNQETIHLYESEKRVRDFMDSEMFGEDDRKAIEVPNFDLETILSATDHFSEANKIGRGGFGTVYKGVFPGGLEIAIKRLSKGSTQGVEEFQNEAILIAKLQHRNLVRLLGYYVGGEEKMLVYEYMPNKSLDFFIFGKKLFQTFSSLLLDQTQRLLVNWEMRFNIIVGIVRGLVYLHEDSRLRIIHRDMKTSNILLDAEMNPKISDFGLARIFDGKQTEATTNRVVGTYGYMSPEYALDGSFSVKSDVFSFGIVVLEIVSGRRNTGFYQSKEALNLVGYVWKLWRENRALEIAEGAIRESCNPNEVVKCVVVGLLCVQEDPNERPTMSDVAFMLSSGSDPSSLPDPKHPAFVDKKSTPTSSSSATSSLGFKQEIVSNDFSLLEPR 1026
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6428762 6435017 + Tan0004625.1 Tan05g0835 752143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0835 1026 SMART blect_4 39 159 IPR001480 -
Tan05g0835 1026 Gene3D - 41 157 IPR036426 -
Tan05g0835 1026 FunFam Os08g0179000 protein 662 766 - -
Tan05g0835 1026 Pfam PAN-like domain 353 412 IPR003609 -
Tan05g0835 1026 Gene3D Transferase(Phosphotransferase) domain 1 767 984 - -
Tan05g0835 1026 Pfam D-mannose binding lectin 84 174 IPR001480 -
Tan05g0835 1026 ProSiteProfiles PAN/Apple domain profile. 343 440 IPR003609 -
Tan05g0835 1026 CDD B_lectin 43 159 IPR001480 -
Tan05g0835 1026 Gene3D Phosphorylase Kinase; domain 1 636 766 - -
Tan05g0835 1026 MobiDBLite consensus disorder prediction 977 1008 - -
Tan05g0835 1026 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 767 982 - -
Tan05g0835 1026 SUPERFAMILY Protein kinase-like (PK-like) 677 1000 IPR011009 -
Tan05g0835 1026 ProSiteProfiles Protein kinase domain profile. 691 992 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0835 1026 Pfam Protein tyrosine and serine/threonine kinase 694 972 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0835 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0835 1026 SMART serkin_6 691 974 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0835 1026 Pfam S-locus glycoprotein domain 237 323 IPR000858 GO:0048544(InterPro)
Tan05g0835 1026 ProSitePatterns Protein kinases ATP-binding region signature. 697 719 IPR017441 GO:0005524(InterPro)
Tan05g0835 1026 ProSiteProfiles Bulb-type lectin domain profile. 33 155 IPR001480 -
Tan05g0835 1026 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 24 990 - -
Tan05g0835 1026 CDD STKc_IRAK 697 975 - -
Tan05g0835 1026 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 184 IPR036426 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0833 Tan-Chr5:6404285 Tan05g0835 Tan-Chr5:6428762 0.00E+00 dispersed
Tan05g0835 Tan-Chr5:6428762 Tan05g3189 Tan-Chr5:83935272 3.70E-132 dispersed
Tan05g0834 Tan-Chr5:6404285 Tan05g0835 Tan-Chr5:6428762 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67595 PF00069 Pkinase 5.10E-44 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0835 - - - 0.0