Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0848 ATGGCACCAACAATAGAAGAGGAACTGAAACTGAGATTATTCTCAGGCGACCTTTCTCAGTTAGGTCCAGCAGAACGGTTCCTCAAAGTGCTGGTGGAAGTTCCTTTTGCTTTCAAACGATTAGAGTGTCTTCTCTTTATGCTCTCAATGTCGGAAGACGTCACTACCATTAAAGAGTCATTCGCAACTCTAGAGGTCGCTTGCAACAAACTCACAAACAGCAGGCTATTTCTCAAGCTATTAGAAGCAGTTCTCAAAACTGGAAATCGAATGAACGACGGGACGTACCGTGGCGGTGCTCAGGCGTTCAAGCTCGATACGCTCTTGAAACTGGCGGATGTTAAAGGAACCGACGGCAAGACTACGCTCTTACACTTCGTCGTACAGGAGATTATCCGTTCGGAGGGAATACGAGCAGCCCGCTCTAACGGAAAAAACGAGAGTTCGTCCAGCATAACCTCAACCGATACCATTTTCGAGGACTTCGCCGACGATTCGACGGAACATTATCGACAATTAGGGCTTCAGGTCGTTTCTGGTTTGAGCACGGAGCTCCAGGACGTTAAAAGAGCGGCAGCCATAGATCCGGATGGGCTAACGACGACGATATCGAAACTCGGCCAGTCTCTATTTAAAACCAAAGGATTCATAAACGCCGAGATGAAGAGTTTAGACGAAGACAGCAAATTCTACCAATCACTGTCAAAATTTTTAGAAGGAGCAGAAGCGGATATTTCTTGGATTTCAGGGGAAGAAAAGAAGATAATGGCAGTGGTGAAGAGCACGGTGGATTACTTCCATGGAAATTCTGGAAAGGAGGAAGGAATGCGATTGTTTACGATCGTACGCGATTTCCTGATTGTGTTAGACAAGACCTGTAAGCAGGTTAGAGAAGCAGCTGCAGCGGCGGCGAAGCAAGCGAAGATTTCCAAGAAAGAAACTCAGACATTGTCGGCTAGTCGCAAGCAGAATTCAGATCTACGGAAGCGGCTATTTCCGGCGATTTTAGAACGACGGATTGGCGAGGAATCGAGTTCTTCGGACGACGAGGACGGCGATGGCGACGGCGACGGCGACAGCGAGAGTTCATCATCAGCATCGTAG 1104 47.83 MAPTIEEELKLRLFSGDLSQLGPAERFLKVLVEVPFAFKRLECLLFMLSMSEDVTTIKESFATLEVACNKLTNSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRSEGIRAARSNGKNESSSSITSTDTIFEDFADDSTEHYRQLGLQVVSGLSTELQDVKRAAAIDPDGLTTTISKLGQSLFKTKGFINAEMKSLDEDSKFYQSLSKFLEGAEADISWISGEEKKIMAVVKSTVDYFHGNSGKEEGMRLFTIVRDFLIVLDKTCKQVREAAAAAAKQAKISKKETQTLSASRKQNSDLRKRLFPAILERRIGEESSSSDDEDGDGDGDGDSESSSSAS 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6636559 6637746 - Tan0022090.1 Tan05g0848 752156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0848 367 Pfam Formin Homology 2 Domain 1 288 IPR015425 -
Tan05g0848 367 MobiDBLite consensus disorder prediction 337 367 - -
Tan05g0848 367 PANTHER FORMIN-RELATED 1 350 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Tan05g0848 367 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 315 IPR015425 -
Tan05g0848 367 Gene3D Formin, FH2 domain 1 330 IPR042201 -
Tan05g0848 367 SMART it6_source 1 304 IPR015425 -
Tan05g0848 367 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 308 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0848 Tan-Chr5:6636559 Tan05g1655 Tan-Chr5:45853534 2.00E-72 dispersed
Tan01g4501 Tan-Chr1:110637190 Tan05g0848 Tan-Chr5:6636559 1.40E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0848 K28090 - csv:101206094 562.762