Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0860 ATGGGGCGGCTTACTTCTATGGTGTTGGCCACTGTAGTTGGTCTTCTAAGCCTGATAGGCTCCACTCAAGCTCAGTTGCAGCTTGGTTTCTACGCAAAAAGCTGCCCAAAGGCTGAGAAGATTGTGCTGGATTTCGTTCACCAGCATATCCACAATGCCCCTTCACTGGCTGCAACTTTCATTAGAATGCACTTCCACGATTGCTTTGTCAGGGGTTGTGATGGATCGGTTCTTATTAATACCACCTCAAACAACCAAGCTGAGAAGGATTCTCCACCAAATCAAACACTCAGAGGCTTTGACTTCATTGATAGAATCAAAAGCCTACTAGAAGCTGAATGCCCTGGAGTTGTGTCTTGCGCAGATGTTCTTTCCTTGGTTGCAAGAGATACCATTGTAGCCACAGGAGGTCCTTACTGGGAAGTTCCAACTGGCCGAAGGGATGGAGTGATCTCAAGGTCATCAGAAGCCTTGGCTAACATTCCTCCTCCATTTGCAAACTTCTCAAGACTCCAAAGCCTTTTCGGAGACCAAGGCCTTGATGTTAAGGACTTAGTATTACTATCTGGCGCTCACACAATCGGCATAGCACATTGCTCATCATTCCGAAACCGACTCTTCAATTTCACCGGCGTCGGTGACCAAGATCCCTCTCTCGACCCCAGATACGCCGCTAATCTGAAGGCCAACAAATGCAAAACTCCGACCGACAATAGCAAAGTGGAAATGGACCCAGGAAGTCGCAACACTTTTGACCTTAGCTACTATTCTCTTCTTCTCAAAAGAAGGGGCCTTTTCGAATCCGATTCTGCTCTTACTAAAGACGCAACTTCATTGGCTCTGGTTCAGAAACTTGTTGAAGGTCCCATTGAAGAATTCTTCGCTGAATTTGCAGCATCCATGGAGAAAATGGGTCGGATTAACGTGAAGACTGGCACTGAAGGTGAAATCAGAAGACGATGCGCAGTGGTGAATAGTTAG 981 46.69 MGRLTSMVLATVVGLLSLIGSTQAQLQLGFYAKSCPKAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDGSVLINTTSNNQAEKDSPPNQTLRGFDFIDRIKSLLEAECPGVVSCADVLSLVARDTIVATGGPYWEVPTGRRDGVISRSSEALANIPPPFANFSRLQSLFGDQGLDVKDLVLLSGAHTIGIAHCSSFRNRLFNFTGVGDQDPSLDPRYAANLKANKCKTPTDNSKVEMDPGSRNTFDLSYYSLLLKRRGLFESDSALTKDATSLALVQKLVEGPIEEFFAEFAASMEKMGRINVKTGTEGEIRRRCAVVNS 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6743085 6745385 - Tan0003326.1 Tan05g0860 752168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0860 326 PANTHER PEROXIDASE 25-RELATED 19 321 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Tan05g0860 326 FunFam Peroxidase 29 173 - -
Tan05g0860 326 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0860 326 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0860 326 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0860 326 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0860 326 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0860 326 FunFam Peroxidase 162 304 - -
Tan05g0860 326 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0860 326 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0860 326 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0860 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0860 326 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0860 326 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0860 326 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0860 326 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0860 326 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0860 326 Gene3D - 29 325 - -
Tan05g0860 326 ProSiteProfiles Plant heme peroxidase family profile. 25 325 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0860 326 Gene3D Peroxidase, domain 2 162 304 - -
Tan05g0860 326 CDD secretory_peroxidase 25 324 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan05g0860 326 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601(InterPro)
Tan05g0860 326 Pfam Peroxidase 44 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g0860 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Tan05g0860 326 SUPERFAMILY Heme-dependent peroxidases 25 325 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0321 Tan-Chr2:2652912 Tan05g0860 Tan-Chr5:6743085 7.70E-100 dispersed
Tan03g2114 Tan-Chr3:75970645 Tan05g0860 Tan-Chr5:6743085 3.70E-67 dispersed
Tan05g0860 Tan-Chr5:6743085 Tan06g0677 Tan-Chr6:5111292 2.00E-71 dispersed
Tan01g3528 Tan-Chr1:100449636 Tan05g0860 Tan-Chr5:6743085 5.90E-60 transposed
Tan02g0052 Tan-Chr2:684767 Tan05g0860 Tan-Chr5:6743085 3.50E-59 transposed
Tan02g1282 Tan-Chr2:35062624 Tan05g0860 Tan-Chr5:6743085 4.90E-62 transposed
Tan06g2612 Tan-Chr6:78687832 Tan05g0860 Tan-Chr5:6743085 1.20E-76 transposed
Tan02g0320 Tan-Chr2:2632345 Tan05g0860 Tan-Chr5:6743085 9.60E-135 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0860 K00430 - csv:101213629 575.859