Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0866 ATGTTCCAGTCAAGCATTTTTGACGACGGTAAGCTCCTCCCCTTAGACATGCCTCAAAACACCTCCGAGAGCGATCTTGCTCGAATCCGAGACGATGACTTCGACAGCGCCACTAAATCCGGTAGCGACAACAACCACGAACTCGCCTCCGGGGACGACCAAGACCCTCGTCCTAAAAAGAAGCGTTACCATCGGCATACCCAACATCAGATTCAAGAAATGGAAGCTTTCTTCAAGGAGTGTCCTCATCCTGATGATAAACAAAGGAAGGAATTAAGCAGGGAATTAGGGTTAGAGCCGTTGCAAGTCAAATTCTGGTTCCAAAACAAACGCACTCAAATGAAGAATCAACATGAGCGCCATGAGAACACCCAACTTCGAACAGAAAATGAGAAGCTTCGAGCTGATAACATGAGATACAGAGAAGCCCTTAGCAATGCCTCATGCCCTAATTGCGGTGGCCCTACCGCCATCGGCGAAATGTCCTTTGATGAACATCATCTTAGACTCGAAAATGCTCGTCTTCGCGAAGAGATCGATCGCATTTCAGCAATAGCTGCAAAATATGTGGGGAAGCCAGTTGTGAACTACCCTCTACTTTCTCCACCAGTTCCATCTCGCCCACTAGAGCTCGGAATGGGCAACTTCGGACCACAACAAGGCCTTGGAGGAGACATCTATGGCTCGGCCGGTGACCTAATCCGATCCATCAGCGCCCCGACCGAGGCTGATAAGCCGATGATCATCGAGCTGGCAGTTGCAGCCATGGAAGAGCTCACTAGAATGGCACAAATGGGCGAACCCTTGTGGATGACTAGCCTGGATGGCTCCACTAATGTGCTCAATGAAGATGAGTACTTGAGAACGTTTCCTAGAGGCATTGGTCCTAAGCCATCTGGTTTTAAATGTGAAGCCTCTCGTGAATCTGCTGTTGTTATCATGAATCATATTAACCTTGTTGAAATTCTCATGGATGTGAATCAATGGTCGACTTTATTTTCTGGAATTGTGTCTAGAGCTATGACACTTGAAGTGTTATCAACTGGAGTAGCTGGAAATTACAATGGAGCTTTGCAAGTGATGACGTCGGAGTTTCAAGTTCCTTCACCGCTAGTTCCGACCCGAGAGAGCTACTACGTTCGATATTGCAAACAGCACGGGGACGGGACATGGGCGGTGGTGGATGTTTCATTGGACGATCTTCGCCCTACGCCGGGACTTAGATGCAGAAGAAGACCTTCCGGTTGTTTGATCCAAGAAATGCCAAATGGTTATTCAAAGGTTACATGGGTTGAGCATGTTGAAATTGATGATAGAGGAGTTCATAATCTTTACAAGCAGCTGGTGAGCTCTGGACAAGCTTTTGGGGCCAAACGTTGGGTTACAACTTTAGATCGCCAATGTGAACGACTTGCCAGTGCCATGGCCACCAACATATCAACTAGTGATGTTGGAGTGATAACGAATCAAGAAGGGAGAAAGAGCATGTTGAAGCTGGCTGAGAGAATGGTGATAAGTTTCTGTGCTGGAGTGAGCGCCTCCACAACTCACACATGGACTACTCTTTCGGGAACGGGTGCAGACGACGTTCGGGTCATGACCCGAAAGAGCATCGACGACCCGGGAAGACCTCCCGGTATTGTCCTGAGTGCCGCAACTTCCTTCTGGCTCCCCGTTCCACCCAAGAGAATCTTCGATTTTCTCCGAGATGAGAACTCTCGAAGTGAGTGGGACATTCTTTCCAATGGCGGAGTGGTTCAAGAAATGGCCCACATCGCCAACGGCCGCGACACTGGCAATTGCGTTTCTCTGCTGCGTGTAAACAGCGCAAATTCAAGCCAAAGCAACATGCTAATCCTACAAGAAAGCTGCACAGACCCAACAGCCTCATTCGTAATCTACGCTCCCGTGGACATCGTCGCAATGAACCTCGTCCTCAACGGCGGCGACCCCGACTACGTCGCACTTCTCCCCTCCGGCTTCGCCATTCTCCCGGACGGCACCGCCACCCACAGTGTAGGCAACGGCGGCGGAGAGACTGTCTCTGGTGGGTCCCTCCTGACGGTTGCATTTCAGATTCTGGTGGATTCAGTGCCAACGGCGAAACTGTCACTCGGGTCAGTTGCAACGGTTAACAACCTGATTGCGTGTACGGTGGAGAGGATTAAAGCGTCATTATCATGCGAAACTGCGTAA 2196 49.82 MFQSSIFDDGKLLPLDMPQNTSESDLARIRDDDFDSATKSGSDNNHELASGDDQDPRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELGMGNFGPQQGLGGDIYGSAGDLIRSISAPTEADKPMIIELAVAAMEELTRMAQMGEPLWMTSLDGSTNVLNEDEYLRTFPRGIGPKPSGFKCEASRESAVVIMNHINLVEILMDVNQWSTLFSGIVSRAMTLEVLSTGVAGNYNGALQVMTSEFQVPSPLVPTRESYYVRYCKQHGDGTWAVVDVSLDDLRPTPGLRCRRRPSGCLIQEMPNGYSKVTWVEHVEIDDRGVHNLYKQLVSSGQAFGAKRWVTTLDRQCERLASAMATNISTSDVGVITNQEGRKSMLKLAERMVISFCAGVSASTTHTWTTLSGTGADDVRVMTRKSIDDPGRPPGIVLSAATSFWLPVPPKRIFDFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNLVLNGGDPDYVALLPSGFAILPDGTATHSVGNGGGETVSGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCETA 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6853727 6859640 + Tan0022089.1 Tan05g0866 752174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0866 731 SMART START_1 250 470 IPR002913 GO:0008289(InterPro)
Tan05g0866 731 SUPERFAMILY Bet v1-like 241 472 - -
Tan05g0866 731 SUPERFAMILY Bet v1-like 489 723 - -
Tan05g0866 731 MobiDBLite consensus disorder prediction 1 68 - -
Tan05g0866 731 Pfam START domain 251 470 IPR002913 GO:0008289(InterPro)
Tan05g0866 731 Gene3D - 300 469 IPR023393 -
Tan05g0866 731 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 40 729 IPR042160 -
Tan05g0866 731 CDD homeodomain 60 118 IPR001356 GO:0003677(InterPro)
Tan05g0866 731 Pfam Homeodomain 60 116 IPR001356 GO:0003677(InterPro)
Tan05g0866 731 CDD START_ArGLABRA2_like 245 469 - -
Tan05g0866 731 SMART HOX_1 58 121 IPR001356 GO:0003677(InterPro)
Tan05g0866 731 ProSitePatterns 'Homeobox' domain signature. 92 115 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Tan05g0866 731 Coils Coil 111 143 - -
Tan05g0866 731 SUPERFAMILY Homeodomain-like 48 117 IPR009057 -
Tan05g0866 731 MobiDBLite consensus disorder prediction 25 59 - -
Tan05g0866 731 Gene3D - 46 134 - -
Tan05g0866 731 FunFam Homeobox-leucine zipper protein HDG1 45 133 - -
Tan05g0866 731 ProSiteProfiles 'Homeobox' domain profile. 57 117 IPR001356 GO:0003677(InterPro)
Tan05g0866 731 ProSiteProfiles START domain profile. 241 473 IPR002913 GO:0008289(InterPro)
Tan05g0866 731 FunFam Homeobox-leucine zipper protein GLABRA 2 250 469 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2334 Tan-Chr3:77316869 Tan05g0866 Tan-Chr5:6853727 2.10E-219 dispersed
Tan05g0866 Tan-Chr5:6853727 Tan05g3114 Tan-Chr5:83299086 1.40E-282 dispersed
Tan01g4523 Tan-Chr1:110922333 Tan05g0866 Tan-Chr5:6853727 9.90E-111 wgd
Tan02g0328 Tan-Chr2:2703797 Tan05g0866 Tan-Chr5:6853727 0.00E+00 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27454 PF01852 START 2.20E-58 CL0209 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0866 K09338 - csv:101214763 1373.61