Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g0869 | ATGGAGGTGTTTTGGATTTGGAGAAGTGGCCATTGGGTCAAAACCAGAGTGCTGTTATTTGCATTGTTCTTTGGGATGTGGATGCCTTTGGGAGTGATTGGTGTCTCTCGAAACACAAGCGTTCCTTCTTCGAATCCGAGGGTGCTGAACATTGGAGTTCTGTTCACTCTTGATTCGGTTATTGGAAGGTCTGCACAGCCTGCAATTTTAGCTGCTGTGGACGATGTCAATGCTGACAACAGCATTCTTCCTGGAACAAAGCTGAATGTGATCTTACATGACACAAACTGCAGCGGATTTCTTGGAACTGTGGAAGCCTTGCAGCTGATGGAAGATGAAGTAGTTGCTGCTATTGGGCCACAGTCCTCGGGCATCGCTCACGTCATTTCCCATCTTATCAATGAACTTCATGTACCGCTTCTATCATTTGGCGCTACGGATCCTTCTTTGTCCGCACTACAATACCCGTATTTCGTTCGGACCACACAAAGTGATTACTTCCAGATGAATGCAATTGCTGATCTGATAGGTTATTTTGAATGGAGAGAGGTCGTTGCCATCTTTGTAGATGATGATAATGGCAGAAGCGGGGTATCGGCATTGAGTGATGCCTTGGCGAAGAAGCGAGCCAGGATCTCTTACAAGGCTGCCTTCCCTCCTGGATCCCCCACTAGCGTTATTAGTGACTTGTTGGTTTCAGTAAACCTCATGGAATCTCGGGTGTATATTGTACATGTTAATCCTGACACTGGTTTATCAGTATTTTCGATTGCTAAGAAACTTCAGATGATGAGCAGTGGTTATGTCTGGATTGCAACAGATTGGCTTCCTTCTTTTCTTGATTCCTTCGAAACAAATAATCCTGATGTAATGAATCAGTTACAAGGGGTTGTTGCTCTTCGTCACCACACCGCAGACAGTGATCTGAAGAAGAACTTCATCTCCAAATGGAAGAATCTAAAATACAAGAAGAGTACAAACTTCAACTCTTATGCACTTTATGCATACGACTCTGTTTGGTTAGCAGCTCATGCTCTTCACACATTCTTTAAAGAAGGTGGCAATATATCTTTTTCTAGTGACTCGAAGTTACGTGAAATCAATGGAAGCATGCTGCACTTAACATCACTTCGAGTTTTTAATGGCGGCGAACAACTTCTACAGACAATTAAGAGAACAAACTTCACGGGTGTAAGTGGGCAGATTCAATTTGGTGACGACAGAAATTTGGTTCATCCAGCCTATGATATCCTGAACATTGGGGGAACTGGTTTGCGTAGAATTGGTTACTGGTCAAATTATTCTGGTCTATCAACTATTGCACCAGAGAGCTTATATCCAAAGCCTCTTAATGCTTCCCCAAATAACCATCTCTACAGTGTAATATGGCCGGGTGAAGTAACGACCGTTCCTCGAGGATGGGTGTTCCCGCACAATGGGAAACCATTGCAGATTGTAGTCCCTAACCGTGTGAGTTACAAAGCCTTTGTGTCTAAAGACAAGAATCCTCCAGGAGTTAAAGGATATTGTATAGATGTCTTTGAAGCTGCCATAAACTTGTTGCCTTATCCAGTTCCTCATACATATATATTATATGGAGATGGAAAGGACAATCCTGAATACAGCAATCTTGTATATGAAGTTTCACAGAATAAATATGATGCAGCTGTTGGTGATATTACGATTGTAACGAATAGGACGAAGATTGTGGACTTCACACAACCATTTATGGAGTCGGGACTTGTCGTAGTTACTGTCGTCAAAGAGGAGAAGTCTAGTCCGTGGGCTTTTCTCAGGCCGTTTACTGTTCAAATGTGGGCTGTCACTGCAATATTCTTTATTTTTGTTGGAGCAGTTGTTTGGATTCTTGAGCACCGGACTAATGAAGAATTCCGTGGTCCACCAAGGCAACAACTAATAACAATTTTTTGGTTTAGTTTCTCGACGATGTTCTTTTCTCACAAGGAAAACACCGTAAGCACCCTCGGACGGTTGGTGCTGATAATATGGCTCTTTGTTGTGTTAATTATCAATTCAAGCTACACAGCTAGTTTGACGTCGATCTTAACGGTGCAGCAGCTAACGTCAAAGGTTGAAGGGATTGATAGCTTAATCTCTAGCACAGATGCCGTTGGAGTTCAGGAAGGGTCATTTGCATTGAAGTATCTGACTGATGAGCTGAATATAGCAGCATCTAGGATCGTTAAGTTGAAAAATCAGGAGGAATATGCCGATGCTCTTCGGCGTGGAACTGCAAATGGCGGGGTAGCTGCCATTGTGGATGAGCTTCCTTACGTTGAGCTTTTCTTGTCTGGCACCAATTGCATATTCAGGACGGTCGGACAGGAGTTCACGAAAAGTGGATGGGGATTTGCATTCCAAAGGGACTCTCCTCTTGCAGTTGATTTGTCAACAGCCATTCTTCAACTCTCAGAGAATGGTGATCTTCAAAAGATCCACGACAAATGGCTCTCACGAACCGAGTGTTCGATGAGCCTCAACCAAGTCGACGTTAACCAACTATCACTGAGTAGCTTTTGGGGACTGTTCCTAATTTGTGGCATTGCCTGCTTTGGTGCTCTTTTGATATTCTTCTTTAGAGTACTATTCCAATACCGAAGATCTACCCCGGAAACTCAGCCTGAAGTCGAGGAGACCGAACCTGTTAGGACGAGACGCCTTAGTCGTACAACAAGCTTCATGCAATTTGTAGATCAAAGAGAAGTCAAAAAGCCTAAAAGAAAATCCATTGATATCAAACAAGCTAGTCAGGACTTGGAAGGCCACCTTGATTCGCCACCTCATTAG | 2808 | 43.34 | MEVFWIWRSGHWVKTRVLLFALFFGMWMPLGVIGVSRNTSVPSSNPRVLNIGVLFTLDSVIGRSAQPAILAAVDDVNADNSILPGTKLNVILHDTNCSGFLGTVEALQLMEDEVVAAIGPQSSGIAHVISHLINELHVPLLSFGATDPSLSALQYPYFVRTTQSDYFQMNAIADLIGYFEWREVVAIFVDDDNGRSGVSALSDALAKKRARISYKAAFPPGSPTSVISDLLVSVNLMESRVYIVHVNPDTGLSVFSIAKKLQMMSSGYVWIATDWLPSFLDSFETNNPDVMNQLQGVVALRHHTADSDLKKNFISKWKNLKYKKSTNFNSYALYAYDSVWLAAHALHTFFKEGGNISFSSDSKLREINGSMLHLTSLRVFNGGEQLLQTIKRTNFTGVSGQIQFGDDRNLVHPAYDILNIGGTGLRRIGYWSNYSGLSTIAPESLYPKPLNASPNNHLYSVIWPGEVTTVPRGWVFPHNGKPLQIVVPNRVSYKAFVSKDKNPPGVKGYCIDVFEAAINLLPYPVPHTYILYGDGKDNPEYSNLVYEVSQNKYDAAVGDITIVTNRTKIVDFTQPFMESGLVVVTVVKEEKSSPWAFLRPFTVQMWAVTAIFFIFVGAVVWILEHRTNEEFRGPPRQQLITIFWFSFSTMFFSHKENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLTSKVEGIDSLISSTDAVGVQEGSFALKYLTDELNIAASRIVKLKNQEEYADALRRGTANGGVAAIVDELPYVELFLSGTNCIFRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQKIHDKWLSRTECSMSLNQVDVNQLSLSSFWGLFLICGIACFGALLIFFFRVLFQYRRSTPETQPEVEETEPVRTRRLSRTTSFMQFVDQREVKKPKRKSIDIKQASQDLEGHLDSPPH | 935 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 6890518 | 6896060 | - | Tan0021177.2 | Tan05g0869 | 752177 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g0869 | 935 | MobiDBLite | consensus disorder prediction | 907 | 935 | - | - | |
Tan05g0869 | 935 | Pfam | Ligated ion channel L-glutamate- and glycine-binding site | 502 | 585 | IPR019594 | GO:0015276(InterPro)|GO:0016020(InterPro) | |
Tan05g0869 | 935 | Gene3D | - | 593 | 728 | - | - | |
Tan05g0869 | 935 | MobiDBLite | consensus disorder prediction | 907 | 925 | - | - | |
Tan05g0869 | 935 | SUPERFAMILY | Periplasmic binding protein-like I | 43 | 475 | IPR028082 | - | |
Tan05g0869 | 935 | PIRSF | IGluLR_plant | 13 | 932 | IPR017103 | - | |
Tan05g0869 | 935 | Gene3D | - | 68 | 412 | - | - | |
Tan05g0869 | 935 | SUPERFAMILY | Periplasmic binding protein-like II | 459 | 825 | - | - | |
Tan05g0869 | 935 | Gene3D | - | 776 | 831 | - | - | |
Tan05g0869 | 935 | CDD | GluR_Plant | 481 | 824 | - | - | |
Tan05g0869 | 935 | Pfam | Receptor family ligand binding region | 65 | 422 | IPR001828 | - | |
Tan05g0869 | 935 | Coils | Coil | 720 | 740 | - | - | |
Tan05g0869 | 935 | FunFam | Glutamate receptor | 720 | 828 | - | - | |
Tan05g0869 | 935 | Gene3D | - | 164 | 437 | - | - | |
Tan05g0869 | 935 | CDD | PBP1_GABAb_receptor_plant | 50 | 438 | IPR044440 | - | |
Tan05g0869 | 935 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 335 | 347 | - | - | |
Tan05g0869 | 935 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 62 | 78 | - | - | |
Tan05g0869 | 935 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 122 | 150 | - | - | |
Tan05g0869 | 935 | PANTHER | IONOTROPIC GLUTAMATE RECEPTOR | 50 | 912 | IPR015683 | GO:0005886(PANTHER)|GO:0015276(PANTHER)|GO:0038023(PANTHER) | |
Tan05g0869 | 935 | FunFam | Glutamate receptor | 478 | 594 | - | - | |
Tan05g0869 | 935 | Gene3D | - | 477 | 592 | - | - | |
Tan05g0869 | 935 | FunFam | Glutamate receptor | 164 | 326 | - | - | |
Tan05g0869 | 935 | SMART | GluR_14 | 484 | 826 | IPR001320 | GO:0015276(InterPro)|GO:0016020(InterPro) | |
Tan05g0869 | 935 | FunFam | Glutamate receptor | 594 | 724 | - | - | |
Tan05g0869 | 935 | Pfam | Ligand-gated ion channel | 603 | 857 | IPR001320 | GO:0015276(InterPro)|GO:0016020(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g0869 | Tan-Chr5:6890518 | Tan09g1644 | Tan-Chr9:68080492 | 3.60E-126 | dispersed | |
Tan05g0868 | Tan-Chr5:6890518 | Tan05g0869 | Tan-Chr5:6890518 | 0.00E+00 | tandem | |
Tan05g0869 | Tan-Chr5:6890518 | Tan05g0870 | Tan-Chr5:6927488 | 7.70E-254 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g0869 | K05387 | - | csv:101215485 | 1640.94 |