Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0893 ATGGACTGGACTAGAGGCCACGTCATCGGCCACGGCTCCTCCGCCACCGTCTTCCTCGCCTCGGCTTCTTCTACCGGCGACGTCTTCGCCGTCAAGTCCGCCGAGATATCTCAGTCGCAATCTCTCCAGAGAGAACAACAGTTTCTTTCTTCTTTAGCCTCTCCTTACGTAGTTTCTTATAGAGGTTGCGAGGTTCGTAGAGAACAGAGTGGGGTCTTGATGTTTAATCTCTTCATGGAGTATTTACCCAACGGCTCTCTCGCCGACGTAATTCGCCGCCGTGGAGGGCGGCTCGACGAGGCGGCGATCGGAATCTACACGAGGCAGTTACTACAGGGCCTACAGTACCTTCATTCAAAAGGATTGGTACATTGCGACATTAAAGCCCGAAACGTTTTAATCGGTCGGGACGGTGGGGCGAAACTGGCCGATTTCGGGTGCGCCAAGTGGGCGAGCCAAACGGACCCAATTGGCGGGACGCCGCTGTTTATGGCGCCGGAAGTGGCTCGTGGTGAGCACCAAGGGCTCGCCTCCGACATTTGGTCAATTGGGTGTACAGTCATCGAAATGGCCACCGGCGGCGGCTCACCGTGGCCAAAAACAACCGACGCCGACCCAATTTCCGCCCTGTACCGAATTGGGTATTCCGGCAAGTCGCCGGAAATTCCATCTTTTTTATCCCACAAAGCAAAGGACTTTTTGGAGAAGTGCTTAAGGAGAAATCCGAACGAGAGATGGACAGCCAATCAGCTTCTGAATCACCCATTTTTAGGGGAATTGAATTCCATTTCCACTCCAAAGCAAATTCAGGAAGTTCATTCAGATTCTCCGACCAGTATTCTAGAACAGAGCATTTGGAGATCAATGGAAGAAAGTAAAATCACACAATCTAGATCATTTAGACCCAATTGGGCGCCAGCAGAGGAGATCCGACGGCTGGCGATGGTTTCAGGGGAGCCCAGATGGACAGAGGATGAGAATTGGATGACGATTCGAAGAGAAGAGAATGGAAAAAGCGAAGAAGTCGGTGATGAAGGTGACGTGAATGGTGGGTCAGAAGTGAAAGTTTGTAGTAATAATTGTTGGGATGAGAAACAGAGAGGTAGTGGCGGCAAAGAGTGGTTGGAAATGAAATTCACAGATAAGAATGTTAGTTGTAGAATTAGTAGGAATGATTTGGCAGACCATAGTTGTAGGAAGATTATTACTCTTGTATATAATAATATTAATCATCTCTGTTTTCATACACATAAAGCTAAATTTGTTCCTTTAATACCAAGTTTATTATGA 1290 48.14 MDWTRGHVIGHGSSATVFLASASSTGDVFAVKSAEISQSQSLQREQQFLSSLASPYVVSYRGCEVRREQSGVLMFNLFMEYLPNGSLADVIRRRGGRLDEAAIGIYTRQLLQGLQYLHSKGLVHCDIKARNVLIGRDGGAKLADFGCAKWASQTDPIGGTPLFMAPEVARGEHQGLASDIWSIGCTVIEMATGGGSPWPKTTDADPISALYRIGYSGKSPEIPSFLSHKAKDFLEKCLRRNPNERWTANQLLNHPFLGELNSISTPKQIQEVHSDSPTSILEQSIWRSMEESKITQSRSFRPNWAPAEEIRRLAMVSGEPRWTEDENWMTIRREENGKSEEVGDEGDVNGGSEVKVCSNNCWDEKQRGSGGKEWLEMKFTDKNVSCRISRNDLADHSCRKIITLVYNNINHLCFHTHKAKFVPLIPSLL 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7131630 7132970 - Tan0009969.1 Tan05g0893 752201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0893 429 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524(InterPro)
Tan05g0893 429 FunFam Mitogen-activated protein kinase kinase kinase 17 2 312 - -
Tan05g0893 429 CDD STKc_MAPKKK 2 257 - -
Tan05g0893 429 ProSiteProfiles Protein kinase domain profile. 3 257 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0893 429 PRINTS Tyrosine kinase catalytic domain signature 79 92 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0893 429 PRINTS Tyrosine kinase catalytic domain signature 116 134 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0893 429 PRINTS Tyrosine kinase catalytic domain signature 178 200 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0893 429 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0893 429 SUPERFAMILY Protein kinase-like (PK-like) 2 299 IPR011009 -
Tan05g0893 429 Gene3D Transferase(Phosphotransferase) domain 1 2 328 - -
Tan05g0893 429 SMART serkin_6 3 257 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0893 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0893 429 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 257 IPR052751 GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0893 Tan-Chr5:7131630 Tan08g0555 Tan-Chr8:5391703 1.40E-45 dispersed
Tan03g1545 Tan-Chr3:71753463 Tan05g0893 Tan-Chr5:7131630 9.90E-61 transposed
Tan05g0964 Tan-Chr5:7942348 Tan05g0893 Tan-Chr5:7131630 2.60E-14 transposed
Tan05g1617 Tan-Chr5:40117315 Tan05g0893 Tan-Chr5:7131630 2.70E-55 transposed
Tan06g0489 Tan-Chr6:3644687 Tan05g0893 Tan-Chr5:7131630 6.70E-43 transposed
Tan08g2366 Tan-Chr8:75028267 Tan05g0893 Tan-Chr5:7131630 5.90E-56 transposed
Tan02g0354 Tan-Chr2:3027367 Tan05g0893 Tan-Chr5:7131630 3.20E-114 wgd
Tan03g2290 Tan-Chr3:77105204 Tan05g0893 Tan-Chr5:7131630 6.20E-87 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67596 PF00069 Pkinase 1.50E-55 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0893 K20716 - csv:101208274 598.201