Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0927 ATGCCGAAGGGTTTGAAGAGTAAATGCCAGTCTACTTCTCATCAGCTTTTGAAGGAAAAAGCAAAGAACCGTGTTAATGACCTTCAAGGGATATTCACTAATCTTCAATGTGCAAGGAAGGAGAGTCGTACTACTGATGTTGCTGTCTTGGAGGAGCAAGTGCATCAGATGCTCAGGGAGTGGAATGCTGAGCTTAACGAACCGTCACCTGCCTCTTCATATGTTGAGGGCAGTCTTGGATCGTTCTCGCAAGAGTTAGCCCGTCTTCTCGAGCATTGTGATGAGCAAGATGATGCAACTAGTACATTGGCTGAACCAAAGTCTGAGCCTGATCTCCATTGCGTTCTTGCCAGCAATCCGTCAGATTTTCAGCAGGATGGTTCTGGTATTCCGGAGCTCCAACAGCATAGTTTTCTTGGCTTTGAAGAGTGCAAAGTTTCTACTCCAGTTCTACAGAATTATTCGTTTTACAAATCAGACATGGCTACTCAGTCTAATAGTCAAGATTTCAAATTAGATCAAAACTTCGTGCAGAACATATTGGTCAATAAGGATGATATGTCTACGTTGGATTGCCATTTATTGGACACGCTTCAAGAGTTCGACTATGGGGTTCTTGTTGGGGCATATGATGCGGGAGACATTAGTCAGGACACAATGCCTGGCATTCTCCCAAATATCTCACCCCCACCATCTGCTTTTCTGGGGCCAATATGTGCTCTCTGGGATTGTTTCAGACCTGCTCAAGGATCTAAATGGTGCCAGGACTATTGCAGTAGCTGCCATTCTATGCTTGCAATAAATGAAGGCCTTCCAGGAATGGCTCCAATATTGCGCCCTGGGGGCATTGGCTTAAAGGATGGTCCACTGTTTGCTGCTCTTCTTGCAAAGACACAGACCAAAGAAGTTGGAATACCTATATGTGATGGCGCTGCAACGAGAAAATCTCCATGGAATGCTCCTGAGCTGTTTGATATTTCATTTCTTGAGGGTGAGACAGTCAGGGAATGGCTCTATTTTGACAAGCCTAGACGTGCCTTTGAGAGTGGTAATCGAAAGCAAAGGTCATTACCGGATTATAGAGGTCGTGGTTGGCACGAATCAAGGAAGCAGGTGATGAAGGAGTTCGGTGGTCAGAAGAAGTCCTACTACATGGATCCACAGCCATCAAGCTCTTTTGAATGGCATTTGTACGAATATGATATCAGCAATTATGATTCATTTGCATTATATAGGCTGGAACTCAAGCAAGCTGATGCAAAGAAGAGTCCAAAGGGAAAACTGACAGCTGATCCTCTGGCTGATCTGCAGAAGAAGATGGGAAGGCTTACTGCAGAGGGGCCTGTTGAGCTTGGACAATCTTAA 1365 44.98 MPKGLKSKCQSTSHQLLKEKAKNRVNDLQGIFTNLQCARKESRTTDVAVLEEQVHQMLREWNAELNEPSPASSYVEGSLGSFSQELARLLEHCDEQDDATSTLAEPKSEPDLHCVLASNPSDFQQDGSGIPELQQHSFLGFEECKVSTPVLQNYSFYKSDMATQSNSQDFKLDQNFVQNILVNKDDMSTLDCHLLDTLQEFDYGVLVGAYDAGDISQDTMPGILPNISPPPSAFLGPICALWDCFRPAQGSKWCQDYCSSCHSMLAINEGLPGMAPILRPGGIGLKDGPLFAALLAKTQTKEVGIPICDGAATRKSPWNAPELFDISFLEGETVREWLYFDKPRRAFESGNRKQRSLPDYRGRGWHESRKQVMKEFGGQKKSYYMDPQPSSSFEWHLYEYDISNYDSFALYRLELKQADAKKSPKGKLTADPLADLQKKMGRLTAEGPVELGQS 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7440464 7444884 - Tan0008916.3 Tan05g0927 752235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0927 454 MobiDBLite consensus disorder prediction 419 454 - -
Tan05g0927 454 PANTHER TRANSCRIPTION FACTOR VOZ1 1 450 IPR039277 GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0045893(PANTHER)|GO:0048578(PANTHER)|GO:0048578(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0925 Tan-Chr5:7440464 Tan05g0927 Tan-Chr5:7440464 1.60E-268 dispersed
Tan05g0927 Tan-Chr5:7440464 Tan05g0929 Tan-Chr5:7441603 4.70E-188 dispersed
Tan05g0926 Tan-Chr5:7440464 Tan05g0927 Tan-Chr5:7440464 1.60E-268 tandem
Tan05g0927 Tan-Chr5:7440464 Tan05g0928 Tan-Chr5:7441603 4.70E-188 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27464 None None None None Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0927 - - - 0.0