Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g0964 | ATGATGCCAGCTGAAAATTCAATTCCATTGGATCGAGATGCAGAGCCTTTTGTTGAGGTTGATCCAACTGGAAGGTTTGGACGATACGATGATCTTCTTGGGTCTGGAGCAGTGAAGAAAGTTTATAGGGCATTTGATCAGGAGGAAGGTATAGAGGTTGCTTGGAATCAGGTTCGGTTGAGAAATTTTAGTGGCGATCCAGTGTTCATCAACCGCTTGAGATCTGAGGTTCAGCTGCTGAGCACGTTAAACAACAAATATATCATTGTTTGTTACAGTGTTTGGAATGATGATGAGCGCAATACGTTGAATTTCATTACCGAGGTGTGCACATCAGGAAATCTGAGGGATTATCGCAAGAAACATCGACATGTTTCAATTAAGGCATTGAAGAAGTGGTCAAAGCAGGTACTTGAGGGATTGGATTATCTTCATACTCATGAGCCTTGCATTATTCACAGAGATCTCAACTGCAGTAACATATTTGTCAATGGGAACATTGGCCAGGTGAAGATAGGTGATCTAGGTTTTGCGGCCATAGTTGGCAGGAGTCATGCTGCACACTCAATCATAGGTACACCAGAGTATATGGCACCAGAGCTGTACGAGGAAGATTACACAGAGATGGTGGATATATACTCCTTTGCTATGTGTTTGCTCGAGATGGTTACAATGGAGATACCATACAGTGAATGTGATAGTGTTGCCAAGATATACAAGAAGGTGACAACTGGAATAAAGCCACAAGCATTAAACATGGTGACTGACAACGAAGTTAGGGCTTTCATCGAGAAGTGCATTGCACAACCAAGGGCAAGGCCTTCCGCTACTGAACTTCTCAAGGACCCCTTCTTCGACGAAGTCAGGGATGAAGATTCTGAGCAGACTTATTAG | 894 | 43.18 | MMPAENSIPLDRDAEPFVEVDPTGRFGRYDDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLRNFSGDPVFINRLRSEVQLLSTLNNKYIIVCYSVWNDDERNTLNFITEVCTSGNLRDYRKKHRHVSIKALKKWSKQVLEGLDYLHTHEPCIIHRDLNCSNIFVNGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFAMCLLEMVTMEIPYSECDSVAKIYKKVTTGIKPQALNMVTDNEVRAFIEKCIAQPRARPSATELLKDPFFDEVRDEDSEQTY | 297 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 7942348 | 7944152 | - | Tan0007200.1 | Tan05g0964 | 752272 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g0964 | 297 | Gene3D | Transferase(Phosphotransferase) domain 1 | 110 | 291 | - | - | |
Tan05g0964 | 297 | Gene3D | Phosphorylase Kinase; domain 1 | 11 | 108 | - | - | |
Tan05g0964 | 297 | ProSiteProfiles | Protein kinase domain profile. | 27 | 285 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g0964 | 297 | FunFam | Probable serine/threonine-protein kinase WNK1 | 12 | 108 | - | - | |
Tan05g0964 | 297 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 15 | 287 | IPR050588 | GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER) | |
Tan05g0964 | 297 | SUPERFAMILY | Protein kinase-like (PK-like) | 20 | 286 | IPR011009 | - | |
Tan05g0964 | 297 | Pfam | Protein kinase domain | 31 | 285 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g0964 | 297 | FunFam | probable serine/threonine-protein kinase WNK9 | 110 | 291 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g3170 | Tan-Chr1:85308391 | Tan05g0964 | Tan-Chr5:7942348 | 3.70E-125 | dispersed | |
Tan05g0964 | Tan-Chr5:7942348 | Tan05g1965 | Tan-Chr5:69268198 | 1.80E-100 | dispersed | |
Tan05g0964 | Tan-Chr5:7942348 | Tan05g0893 | Tan-Chr5:7131630 | 2.60E-14 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67597 | PF00069 | Pkinase | 3.50E-50 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g0964 | K08867 | - | csv:101222153 | 589.726 |