Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0964 ATGATGCCAGCTGAAAATTCAATTCCATTGGATCGAGATGCAGAGCCTTTTGTTGAGGTTGATCCAACTGGAAGGTTTGGACGATACGATGATCTTCTTGGGTCTGGAGCAGTGAAGAAAGTTTATAGGGCATTTGATCAGGAGGAAGGTATAGAGGTTGCTTGGAATCAGGTTCGGTTGAGAAATTTTAGTGGCGATCCAGTGTTCATCAACCGCTTGAGATCTGAGGTTCAGCTGCTGAGCACGTTAAACAACAAATATATCATTGTTTGTTACAGTGTTTGGAATGATGATGAGCGCAATACGTTGAATTTCATTACCGAGGTGTGCACATCAGGAAATCTGAGGGATTATCGCAAGAAACATCGACATGTTTCAATTAAGGCATTGAAGAAGTGGTCAAAGCAGGTACTTGAGGGATTGGATTATCTTCATACTCATGAGCCTTGCATTATTCACAGAGATCTCAACTGCAGTAACATATTTGTCAATGGGAACATTGGCCAGGTGAAGATAGGTGATCTAGGTTTTGCGGCCATAGTTGGCAGGAGTCATGCTGCACACTCAATCATAGGTACACCAGAGTATATGGCACCAGAGCTGTACGAGGAAGATTACACAGAGATGGTGGATATATACTCCTTTGCTATGTGTTTGCTCGAGATGGTTACAATGGAGATACCATACAGTGAATGTGATAGTGTTGCCAAGATATACAAGAAGGTGACAACTGGAATAAAGCCACAAGCATTAAACATGGTGACTGACAACGAAGTTAGGGCTTTCATCGAGAAGTGCATTGCACAACCAAGGGCAAGGCCTTCCGCTACTGAACTTCTCAAGGACCCCTTCTTCGACGAAGTCAGGGATGAAGATTCTGAGCAGACTTATTAG 894 43.18 MMPAENSIPLDRDAEPFVEVDPTGRFGRYDDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLRNFSGDPVFINRLRSEVQLLSTLNNKYIIVCYSVWNDDERNTLNFITEVCTSGNLRDYRKKHRHVSIKALKKWSKQVLEGLDYLHTHEPCIIHRDLNCSNIFVNGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFAMCLLEMVTMEIPYSECDSVAKIYKKVTTGIKPQALNMVTDNEVRAFIEKCIAQPRARPSATELLKDPFFDEVRDEDSEQTY 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7942348 7944152 - Tan0007200.1 Tan05g0964 752272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0964 297 Gene3D Transferase(Phosphotransferase) domain 1 110 291 - -
Tan05g0964 297 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Tan05g0964 297 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0964 297 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Tan05g0964 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 15 287 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Tan05g0964 297 SUPERFAMILY Protein kinase-like (PK-like) 20 286 IPR011009 -
Tan05g0964 297 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0964 297 FunFam probable serine/threonine-protein kinase WNK9 110 291 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3170 Tan-Chr1:85308391 Tan05g0964 Tan-Chr5:7942348 3.70E-125 dispersed
Tan05g0964 Tan-Chr5:7942348 Tan05g1965 Tan-Chr5:69268198 1.80E-100 dispersed
Tan05g0964 Tan-Chr5:7942348 Tan05g0893 Tan-Chr5:7131630 2.60E-14 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67597 PF00069 Pkinase 3.50E-50 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0964 K08867 - csv:101222153 589.726