Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1030 ATGGAGGATAAGCGAGGTATCAGCAGTAACAAGCCTACCGACAAATGGATGGCGTTTGACAGAGAATCAAACACCACAAAAACTCCCGGAAATGAAGCAAAAGAAGACATAAAAAGCTGGCAGTCCTCTTCCAAAGGGGCAATATCAACAGAAGCAAACATAGCAGAAAGGGCGGCTGAGTGGGGACTGGTGGTGGAGACAGATGTGGAGGAAGGCAGTTTCAAGGCCATAGTGGGAAGATCATCAGGGGAGGGAGGCGGCAGCAAAAGGTCATCAGAGAAAATCAGTGGCGCAGGAAAAACTTCAAGCTTTAGCAATGAAAGCTCTGGAGCTTTTCCAAGGGTATCACAAGAGTTGAAGGATGCTTTGGCTTCCTTGGAACAGACATTTGTAGTCTCTGATGCCACCAAACCAGACTGCCCCATCGTGTATGCGAGCAGTGGGTTCTTTGGCATGACTGGTTATACTTCAGAGGAGGTCATTGGAAGGAACTGCCGTTTTCTTCAGGGACCAGAGACGGACCAGAAAGAAGTTGACAAAATTCGACATGCAGTGAAGAACGGCAAAAGCTACTGCGGGAGGCTATTGAACTACAAGAAGAACGGCACTCCTTTCTGGAATCTTCTGACAGTCACGCCTATCAAGGATGACAATGACAATACTATCAAATTTATTGGAATGCAGGTAGAAGTAAGCAAGTACACAGAAGGCATAAATGATAGAGAATTACGACCAAACGGGTTACCGAAGTCATTAATCCGCTATGATGCTCGCCAGAAGGAAAAGGCAATGGGTTCCATCACAGAGGTTGTTCAGACTGTGAAGAATCCTCGATCTCATAATCGAGCCATGAGTCATGACATTACCAGGAAAAAAGAAGAGTTGGAGAAGTTCAATCTTGACTATGTTCTTCCAAAGTCAATTGAAGCTGAAAATGAAACACCGGGTAGACAAACTCCTCAACAGGACCTCAGAGATGATGGCTTAGGCAAGAAACCTAGATCAAGTCGAGTTTCTTTAATGGGATTCAAAGCGAAATCTCTAAGCAGTTCAAGGAAGCTTGAAGTACCAGCCCTTGAACCAGAAATTTTGATGACTGATGAAATAGAACGGACTGATAGTTGGGACCGTGCTGAAAGAGAGAGGGATATTCGCCAAGGAATTGATTTAGCTACCACATTGGAACGCATTGAGAAAAATTTCGTTATTACTGATCCAAGGCTTCCTGATAATCCAATTATATTTGCCTCCGATAGCTTTCTTGAATTGACAGAATATACACGTGAAGAAATTTTGGGACGAAACTGCCGGTTTCTTCAAGGACCTGAAACAGATCAAGATACTGTCTCAAAGATAAGGGATGCAATTAGGGAACAAAGAGAAATAACTGTTCAGTTGATCAACTATACCAAGACGGGTAAAAAGTTCTGGAATTTATTCCACTTGCAACCGATGCGTGATGAAATGGGCGAGCTTCAGTATTTTATCGGTGTACAACTAGATGGAAGTGGTCATGTTGAACCTTTGCAAAACCGCCTTTCAGCGACCGCAGAGGAGCAGAGTGCCAAGCTGGTTAAAGCCACTGCAGAGAATGTTGATGAGGCTGTCCGAGAACTTCCTGATGCCAACTCGAGACCAGAAGATTTGTGGGCGATTCATTCTCAACCAGTCTTCCCAAGGCCTCACAAGAAGCATAGTTCTTCTTGGACTGCCATACAAAAGATTATTCGACGAGGTGGAAAAATTGGACTTCAACATTTTAAGCCAATTAAACCACTGGGTTGTGGAGACACTGGCAGTGTTCATCTGGTGGAACTTCTAGGTACAAGCGAACTTTATGCCTTGAAAGCAATGGAGAAATCAGCACTGTTGAATCGAAACAAGGTCCACAGAGCATGCATTGAAAGGCAAATCATTGCGCTTCTGGATCATCCTTTTCTTCCAACGCTATACACTTCATTTGAGACACCTACACACGTTTGTTTGATAACAGACTTTTGCCCTGGTGGGGAGTTATTTGCATTGCTTGATAAGCAGCCAATGAAAATGTTTAAAGAGGATTCTGCAAGGTTCTATGCTGCAGAGGTCGTCATTGGCTTGGAATATCTTCACTGTCTAGGAATCATTTATAGGGATCTGAAGCCTGAAAATATTCTTCTCCAGAAGGATGGGCATGTTACGCTTGCTGACTTCGATTTATCACTTATGACATCCTGCAAGCCGCAGATTGTGAAGTATCCACCGCCTCACAGTAGAAGGAGATCTCGAAGTCAACCACCACCAGTATTTGTTGCAGAGCCGATCACGCAATCAAATTCATTTGTTGGAACTGAAGAGTATATTGCTCCTGAAATTATAACAGGGGAAGGCCACAGCAGCTCTATCGATTGGTGGGCTCTTGGTATATTGTTGTATGAGATGCTTTATGGTCGCACGCCTTTCAGGGGAAAGAACAGGCAGAAAACTTTTGGTAACATCTTGCACAAAGATCTCACCTTCCCAAGTAGCATTCAGGTAAGTCTTGCAGCAAGGCAGTTGATCAATGCATTGCTACAAAGAGACCCCGACCGACGTTTAGGATCAAGTACAGGTGCAAACGAAATCAAACAGCATCCCTTTTTCCAATCAATCAACTGGCCGTTGATCCGGTGCATGGTCCCGCCACCATTAGAATCACCTCTTCACCTTACTGGGAAAGGTGAAACCACTAAGAACGTAAACTGGGAAGATGATGGGGTGCTTAACACAATGGATATGGATTTTTTCTGA 2769 44.1 MEDKRGISSNKPTDKWMAFDRESNTTKTPGNEAKEDIKSWQSSSKGAISTEANIAERAAEWGLVVETDVEEGSFKAIVGRSSGEGGGSKRSSEKISGAGKTSSFSNESSGAFPRVSQELKDALASLEQTFVVSDATKPDCPIVYASSGFFGMTGYTSEEVIGRNCRFLQGPETDQKEVDKIRHAVKNGKSYCGRLLNYKKNGTPFWNLLTVTPIKDDNDNTIKFIGMQVEVSKYTEGINDRELRPNGLPKSLIRYDARQKEKAMGSITEVVQTVKNPRSHNRAMSHDITRKKEELEKFNLDYVLPKSIEAENETPGRQTPQQDLRDDGLGKKPRSSRVSLMGFKAKSLSSSRKLEVPALEPEILMTDEIERTDSWDRAERERDIRQGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQDTVSKIRDAIREQREITVQLINYTKTGKKFWNLFHLQPMRDEMGELQYFIGVQLDGSGHVEPLQNRLSATAEEQSAKLVKATAENVDEAVRELPDANSRPEDLWAIHSQPVFPRPHKKHSSSWTAIQKIIRRGGKIGLQHFKPIKPLGCGDTGSVHLVELLGTSELYALKAMEKSALLNRNKVHRACIERQIIALLDHPFLPTLYTSFETPTHVCLITDFCPGGELFALLDKQPMKMFKEDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVTLADFDLSLMTSCKPQIVKYPPPHSRRRSRSQPPPVFVAEPITQSNSFVGTEEYIAPEIITGEGHSSSIDWWALGILLYEMLYGRTPFRGKNRQKTFGNILHKDLTFPSSIQVSLAARQLINALLQRDPDRRLGSSTGANEIKQHPFFQSINWPLIRCMVPPPLESPLHLTGKGETTKNVNWEDDGVLNTMDMDFF 922
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8540759 8554670 + Tan0001171.3 Tan05g1030 752338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1030 922 MobiDBLite consensus disorder prediction 85 110 - -
Tan05g1030 922 CDD STKc_phototropin_like 585 893 - -
Tan05g1030 922 ProSitePatterns Protein kinases ATP-binding region signature. 593 616 IPR017441 GO:0005524(InterPro)
Tan05g1030 922 MobiDBLite consensus disorder prediction 1 34 - -
Tan05g1030 922 SUPERFAMILY Protein kinase-like (PK-like) 562 895 IPR011009 -
Tan05g1030 922 ProSiteProfiles PAS repeat profile. 115 188 IPR000014 -
Tan05g1030 922 SUPERFAMILY PYP-like sensor domain (PAS domain) 402 501 IPR035965 -
Tan05g1030 922 FunFam LOV domain-containing protein 375 539 - -
Tan05g1030 922 PANTHER FLIPPASE KINASE 1-RELATED 547 893 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan05g1030 922 MobiDBLite consensus disorder prediction 76 110 - -
Tan05g1030 922 FunFam Putative LOV domain-containing protein 671 886 - -
Tan05g1030 922 FunFam Putative LOV domain-containing protein 129 285 - -
Tan05g1030 922 Gene3D Transferase(Phosphotransferase) domain 1 671 890 - -
Tan05g1030 922 SMART serkin_6 587 874 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g1030 922 NCBIfam PAS domain S-box protein 411 501 IPR000014 -
Tan05g1030 922 NCBIfam PAS domain S-box protein 141 231 IPR000014 -
Tan05g1030 922 CDD PAS 401 501 IPR000014 -
Tan05g1030 922 Gene3D Phosphorylase Kinase; domain 1 586 670 - -
Tan05g1030 922 ProSiteProfiles PAS repeat profile. 386 459 IPR000014 -
Tan05g1030 922 SMART pas_2 117 186 IPR000014 -
Tan05g1030 922 SMART pas_2 388 457 IPR000014 -
Tan05g1030 922 Gene3D PAS domain 375 539 - -
Tan05g1030 922 ProSiteProfiles Protein kinase domain profile. 587 874 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g1030 922 Pfam Protein kinase domain 590 874 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g1030 922 Gene3D PAS domain 129 301 - -
Tan05g1030 922 Pfam PAS domain 409 501 IPR000014 -
Tan05g1030 922 Pfam PAS domain 136 232 IPR000014 -
Tan05g1030 922 ProSiteProfiles PAC domain profile. 460 514 IPR000700 -
Tan05g1030 922 ProSitePatterns Serine/Threonine protein kinases active-site signature. 708 720 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g1030 922 SMART pac_2 463 505 IPR001610 -
Tan05g1030 922 SMART pac_2 192 234 IPR001610 -
Tan05g1030 922 CDD PAS 142 231 IPR000014 -
Tan05g1030 922 ProSiteProfiles PAC domain profile. 189 243 IPR000700 -
Tan05g1030 922 MobiDBLite consensus disorder prediction 1 47 - -
Tan05g1030 922 FunFam LOV domain-containing protein 586 670 - -
Tan05g1030 922 SUPERFAMILY PYP-like sensor domain (PAS domain) 136 228 IPR035965 -
Tan05g1030 922 MobiDBLite consensus disorder prediction 307 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g1028 Tan-Chr5:8540759 Tan05g1030 Tan-Chr5:8540759 0.00E+00 dispersed
Tan05g1030 Tan-Chr5:8540759 Tan07g1405 Tan-Chr7:65077508 2.80E-99 dispersed
Tan05g1029 Tan-Chr5:8540759 Tan05g1030 Tan-Chr5:8540759 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67600 PF00069 Pkinase 9.20E-62 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1030 K20715 - csv:101215355 1672.91