Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g1030 | ATGGAGGATAAGCGAGGTATCAGCAGTAACAAGCCTACCGACAAATGGATGGCGTTTGACAGAGAATCAAACACCACAAAAACTCCCGGAAATGAAGCAAAAGAAGACATAAAAAGCTGGCAGTCCTCTTCCAAAGGGGCAATATCAACAGAAGCAAACATAGCAGAAAGGGCGGCTGAGTGGGGACTGGTGGTGGAGACAGATGTGGAGGAAGGCAGTTTCAAGGCCATAGTGGGAAGATCATCAGGGGAGGGAGGCGGCAGCAAAAGGTCATCAGAGAAAATCAGTGGCGCAGGAAAAACTTCAAGCTTTAGCAATGAAAGCTCTGGAGCTTTTCCAAGGGTATCACAAGAGTTGAAGGATGCTTTGGCTTCCTTGGAACAGACATTTGTAGTCTCTGATGCCACCAAACCAGACTGCCCCATCGTGTATGCGAGCAGTGGGTTCTTTGGCATGACTGGTTATACTTCAGAGGAGGTCATTGGAAGGAACTGCCGTTTTCTTCAGGGACCAGAGACGGACCAGAAAGAAGTTGACAAAATTCGACATGCAGTGAAGAACGGCAAAAGCTACTGCGGGAGGCTATTGAACTACAAGAAGAACGGCACTCCTTTCTGGAATCTTCTGACAGTCACGCCTATCAAGGATGACAATGACAATACTATCAAATTTATTGGAATGCAGGTAGAAGTAAGCAAGTACACAGAAGGCATAAATGATAGAGAATTACGACCAAACGGGTTACCGAAGTCATTAATCCGCTATGATGCTCGCCAGAAGGAAAAGGCAATGGGTTCCATCACAGAGGTTGTTCAGACTGTGAAGAATCCTCGATCTCATAATCGAGCCATGAGTCATGACATTACCAGGAAAAAAGAAGAGTTGGAGAAGTTCAATCTTGACTATGTTCTTCCAAAGTCAATTGAAGCTGAAAATGAAACACCGGGTAGACAAACTCCTCAACAGGACCTCAGAGATGATGGCTTAGGCAAGAAACCTAGATCAAGTCGAGTTTCTTTAATGGGATTCAAAGCGAAATCTCTAAGCAGTTCAAGGAAGCTTGAAGTACCAGCCCTTGAACCAGAAATTTTGATGACTGATGAAATAGAACGGACTGATAGTTGGGACCGTGCTGAAAGAGAGAGGGATATTCGCCAAGGAATTGATTTAGCTACCACATTGGAACGCATTGAGAAAAATTTCGTTATTACTGATCCAAGGCTTCCTGATAATCCAATTATATTTGCCTCCGATAGCTTTCTTGAATTGACAGAATATACACGTGAAGAAATTTTGGGACGAAACTGCCGGTTTCTTCAAGGACCTGAAACAGATCAAGATACTGTCTCAAAGATAAGGGATGCAATTAGGGAACAAAGAGAAATAACTGTTCAGTTGATCAACTATACCAAGACGGGTAAAAAGTTCTGGAATTTATTCCACTTGCAACCGATGCGTGATGAAATGGGCGAGCTTCAGTATTTTATCGGTGTACAACTAGATGGAAGTGGTCATGTTGAACCTTTGCAAAACCGCCTTTCAGCGACCGCAGAGGAGCAGAGTGCCAAGCTGGTTAAAGCCACTGCAGAGAATGTTGATGAGGCTGTCCGAGAACTTCCTGATGCCAACTCGAGACCAGAAGATTTGTGGGCGATTCATTCTCAACCAGTCTTCCCAAGGCCTCACAAGAAGCATAGTTCTTCTTGGACTGCCATACAAAAGATTATTCGACGAGGTGGAAAAATTGGACTTCAACATTTTAAGCCAATTAAACCACTGGGTTGTGGAGACACTGGCAGTGTTCATCTGGTGGAACTTCTAGGTACAAGCGAACTTTATGCCTTGAAAGCAATGGAGAAATCAGCACTGTTGAATCGAAACAAGGTCCACAGAGCATGCATTGAAAGGCAAATCATTGCGCTTCTGGATCATCCTTTTCTTCCAACGCTATACACTTCATTTGAGACACCTACACACGTTTGTTTGATAACAGACTTTTGCCCTGGTGGGGAGTTATTTGCATTGCTTGATAAGCAGCCAATGAAAATGTTTAAAGAGGATTCTGCAAGGTTCTATGCTGCAGAGGTCGTCATTGGCTTGGAATATCTTCACTGTCTAGGAATCATTTATAGGGATCTGAAGCCTGAAAATATTCTTCTCCAGAAGGATGGGCATGTTACGCTTGCTGACTTCGATTTATCACTTATGACATCCTGCAAGCCGCAGATTGTGAAGTATCCACCGCCTCACAGTAGAAGGAGATCTCGAAGTCAACCACCACCAGTATTTGTTGCAGAGCCGATCACGCAATCAAATTCATTTGTTGGAACTGAAGAGTATATTGCTCCTGAAATTATAACAGGGGAAGGCCACAGCAGCTCTATCGATTGGTGGGCTCTTGGTATATTGTTGTATGAGATGCTTTATGGTCGCACGCCTTTCAGGGGAAAGAACAGGCAGAAAACTTTTGGTAACATCTTGCACAAAGATCTCACCTTCCCAAGTAGCATTCAGGTAAGTCTTGCAGCAAGGCAGTTGATCAATGCATTGCTACAAAGAGACCCCGACCGACGTTTAGGATCAAGTACAGGTGCAAACGAAATCAAACAGCATCCCTTTTTCCAATCAATCAACTGGCCGTTGATCCGGTGCATGGTCCCGCCACCATTAGAATCACCTCTTCACCTTACTGGGAAAGGTGAAACCACTAAGAACGTAAACTGGGAAGATGATGGGGTGCTTAACACAATGGATATGGATTTTTTCTGA | 2769 | 44.1 | MEDKRGISSNKPTDKWMAFDRESNTTKTPGNEAKEDIKSWQSSSKGAISTEANIAERAAEWGLVVETDVEEGSFKAIVGRSSGEGGGSKRSSEKISGAGKTSSFSNESSGAFPRVSQELKDALASLEQTFVVSDATKPDCPIVYASSGFFGMTGYTSEEVIGRNCRFLQGPETDQKEVDKIRHAVKNGKSYCGRLLNYKKNGTPFWNLLTVTPIKDDNDNTIKFIGMQVEVSKYTEGINDRELRPNGLPKSLIRYDARQKEKAMGSITEVVQTVKNPRSHNRAMSHDITRKKEELEKFNLDYVLPKSIEAENETPGRQTPQQDLRDDGLGKKPRSSRVSLMGFKAKSLSSSRKLEVPALEPEILMTDEIERTDSWDRAERERDIRQGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQDTVSKIRDAIREQREITVQLINYTKTGKKFWNLFHLQPMRDEMGELQYFIGVQLDGSGHVEPLQNRLSATAEEQSAKLVKATAENVDEAVRELPDANSRPEDLWAIHSQPVFPRPHKKHSSSWTAIQKIIRRGGKIGLQHFKPIKPLGCGDTGSVHLVELLGTSELYALKAMEKSALLNRNKVHRACIERQIIALLDHPFLPTLYTSFETPTHVCLITDFCPGGELFALLDKQPMKMFKEDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVTLADFDLSLMTSCKPQIVKYPPPHSRRRSRSQPPPVFVAEPITQSNSFVGTEEYIAPEIITGEGHSSSIDWWALGILLYEMLYGRTPFRGKNRQKTFGNILHKDLTFPSSIQVSLAARQLINALLQRDPDRRLGSSTGANEIKQHPFFQSINWPLIRCMVPPPLESPLHLTGKGETTKNVNWEDDGVLNTMDMDFF | 922 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 8540759 | 8554670 | + | Tan0001171.3 | Tan05g1030 | 752338 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g1030 | 922 | MobiDBLite | consensus disorder prediction | 85 | 110 | - | - | |
Tan05g1030 | 922 | CDD | STKc_phototropin_like | 585 | 893 | - | - | |
Tan05g1030 | 922 | ProSitePatterns | Protein kinases ATP-binding region signature. | 593 | 616 | IPR017441 | GO:0005524(InterPro) | |
Tan05g1030 | 922 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Tan05g1030 | 922 | SUPERFAMILY | Protein kinase-like (PK-like) | 562 | 895 | IPR011009 | - | |
Tan05g1030 | 922 | ProSiteProfiles | PAS repeat profile. | 115 | 188 | IPR000014 | - | |
Tan05g1030 | 922 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 402 | 501 | IPR035965 | - | |
Tan05g1030 | 922 | FunFam | LOV domain-containing protein | 375 | 539 | - | - | |
Tan05g1030 | 922 | PANTHER | FLIPPASE KINASE 1-RELATED | 547 | 893 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Tan05g1030 | 922 | MobiDBLite | consensus disorder prediction | 76 | 110 | - | - | |
Tan05g1030 | 922 | FunFam | Putative LOV domain-containing protein | 671 | 886 | - | - | |
Tan05g1030 | 922 | FunFam | Putative LOV domain-containing protein | 129 | 285 | - | - | |
Tan05g1030 | 922 | Gene3D | Transferase(Phosphotransferase) domain 1 | 671 | 890 | - | - | |
Tan05g1030 | 922 | SMART | serkin_6 | 587 | 874 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g1030 | 922 | NCBIfam | PAS domain S-box protein | 411 | 501 | IPR000014 | - | |
Tan05g1030 | 922 | NCBIfam | PAS domain S-box protein | 141 | 231 | IPR000014 | - | |
Tan05g1030 | 922 | CDD | PAS | 401 | 501 | IPR000014 | - | |
Tan05g1030 | 922 | Gene3D | Phosphorylase Kinase; domain 1 | 586 | 670 | - | - | |
Tan05g1030 | 922 | ProSiteProfiles | PAS repeat profile. | 386 | 459 | IPR000014 | - | |
Tan05g1030 | 922 | SMART | pas_2 | 117 | 186 | IPR000014 | - | |
Tan05g1030 | 922 | SMART | pas_2 | 388 | 457 | IPR000014 | - | |
Tan05g1030 | 922 | Gene3D | PAS domain | 375 | 539 | - | - | |
Tan05g1030 | 922 | ProSiteProfiles | Protein kinase domain profile. | 587 | 874 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g1030 | 922 | Pfam | Protein kinase domain | 590 | 874 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g1030 | 922 | Gene3D | PAS domain | 129 | 301 | - | - | |
Tan05g1030 | 922 | Pfam | PAS domain | 409 | 501 | IPR000014 | - | |
Tan05g1030 | 922 | Pfam | PAS domain | 136 | 232 | IPR000014 | - | |
Tan05g1030 | 922 | ProSiteProfiles | PAC domain profile. | 460 | 514 | IPR000700 | - | |
Tan05g1030 | 922 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 708 | 720 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan05g1030 | 922 | SMART | pac_2 | 463 | 505 | IPR001610 | - | |
Tan05g1030 | 922 | SMART | pac_2 | 192 | 234 | IPR001610 | - | |
Tan05g1030 | 922 | CDD | PAS | 142 | 231 | IPR000014 | - | |
Tan05g1030 | 922 | ProSiteProfiles | PAC domain profile. | 189 | 243 | IPR000700 | - | |
Tan05g1030 | 922 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
Tan05g1030 | 922 | FunFam | LOV domain-containing protein | 586 | 670 | - | - | |
Tan05g1030 | 922 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 136 | 228 | IPR035965 | - | |
Tan05g1030 | 922 | MobiDBLite | consensus disorder prediction | 307 | 336 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g1028 | Tan-Chr5:8540759 | Tan05g1030 | Tan-Chr5:8540759 | 0.00E+00 | dispersed | |
Tan05g1030 | Tan-Chr5:8540759 | Tan07g1405 | Tan-Chr7:65077508 | 2.80E-99 | dispersed | |
Tan05g1029 | Tan-Chr5:8540759 | Tan05g1030 | Tan-Chr5:8540759 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67600 | PF00069 | Pkinase | 9.20E-62 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g1030 | K20715 | - | csv:101215355 | 1672.91 |