Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1063 ATGGAAGCGAAGAAAGTGGCGATAATCGGAGCCGGAGTAAGCGGACTAGCGGCCTGCAAATTCACTCTATCCAAAGGATTCATTCCGATTGTCTTCGAGGCCAGAGGCGCCATTGGCGGCATTTGGACCGAGACGCTGCAGACGACGGCGCTGCAAACGCCGAGAGAGATGTACCGCTACTCCGATTTCCCGTGGCCGAAATCGGTGACGGAAGATTTTCCCAAGTACAATCAAGTTCTCGATTACCTCAGTTCTTACGCGGACCATTTCGGATTGATGAAGTACGTCAGATTGAATTCGAGAGTCCTGAGTATCGACTATGAAGGCTGCTCCGATGAGGAGATTGAAGGTTGGACTCTTTGGGGCGGCTCCGGCGAGGCTTTCGGTAAACGAGGAAGATGGAGGCTCAATGTGGTTGATGCTCGGACTAATGATCCGCTTGAGGAGATCGTAGTGGACTTTGTTGTACTCTGCATCGGAAGATTTAGCGACGTTCCTAACATTCCTGAATTTCCTGCAAATGGAGGCCCCGAAGCTTTCAAAGCTGGTAAAGTTCTTCACTCTCTTGAATATTCCGCCATGGATTTCGAAAGTGCTTCAAAGCTCATCAAGGACAAGCAAGTTACCGTTGTCGGTTTCCAGAAGTCCGCTCTCGACGTCGCAATGGAATGCGCTAATGCCAATGGCCCGAAAAACCCTTGCACTGTGCTCTACAAAACCGAGCATTGGAACCTTCCTGACCATTATCCATGGGGAATTCCTTTGTCTTTTCTCTATATGAACCGATTCTCTGAGCTTCTGATTCACAAACCTGGCGAGAGCTTCCTTCTCTATCTCCTCGCCGTTCTTCTTTCCCCAATTAGATGGTTGTTCTCGAAGATCGTGGAAACCTATGTGAAGAACAAGCATGGCTTGGCCAAATATGGGATGGTTCCGAGCCATAGCTTTTTGCAGGACATCAGTTCATGTTTACTTGCGAGCTTGCCTGAGAAATTTTACGAGAAAGTGGACGAAGGAAGCATTATATTAAAGAAATCGCAGAGTTTCGAGTTCTGTGAAGAAGGTATCATGATCGAAAGAGAAACCAAACCAATTCGCTCAGATTTGGTCATTTTCGCTACTGGATATAGAGGTGATCAAAAGCTTAAAGAAATCTTTACTTCGTCTACTTTTCGAGATTACATGACGTTTCCCGATACAGTGATTCCCTTGTACAGGCAATGTGTTCATCCCAGAATCCCACAACTAGCTGTGATTGGGTTTACAGAAAGCTCTTCAAACTTGTTCACCTCGGAGATGCGATGCCGATGGGTGGCAGAGTTTCTAGACGGCACGTTCAAACTACCGAGCATCAAGGAGATGGAGAAGGACATAGCCAGTTGGGAGAAGATCTTGAAGCATTACTCAGGCCCTTTCTCCAAGCGAGCTTGCCTTGCTATTTTGCATATTTGGTACAATGATCAGCTCTGCAAGGACATGGGGTGGAACCCTAGAAGGAAAAAGGGCTTCTTCGCTGACTTGTTTGTGCCCTATAGCCCTTCAGATTATGCTTCCCCTTGA 1560 47.24 MEAKKVAIIGAGVSGLAACKFTLSKGFIPIVFEARGAIGGIWTETLQTTALQTPREMYRYSDFPWPKSVTEDFPKYNQVLDYLSSYADHFGLMKYVRLNSRVLSIDYEGCSDEEIEGWTLWGGSGEAFGKRGRWRLNVVDARTNDPLEEIVVDFVVLCIGRFSDVPNIPEFPANGGPEAFKAGKVLHSLEYSAMDFESASKLIKDKQVTVVGFQKSALDVAMECANANGPKNPCTVLYKTEHWNLPDHYPWGIPLSFLYMNRFSELLIHKPGESFLLYLLAVLLSPIRWLFSKIVETYVKNKHGLAKYGMVPSHSFLQDISSCLLASLPEKFYEKVDEGSIILKKSQSFEFCEEGIMIERETKPIRSDLVIFATGYRGDQKLKEIFTSSTFRDYMTFPDTVIPLYRQCVHPRIPQLAVIGFTESSSNLFTSEMRCRWVAEFLDGTFKLPSIKEMEKDIASWEKILKHYSGPFSKRACLAILHIWYNDQLCKDMGWNPRRKKGFFADLFVPYSPSDYASP 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9028964 9038308 + Tan0003351.1 Tan05g1063 752371

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1063 519 FunFam Flavin-containing monooxygenase 2 176 - -
Tan05g1063 519 FunFam Flavin-containing monooxygenase 356 508 - -
Tan05g1063 519 PANTHER DIMETHYLANILINE MONOOXYGENASE 3 511 IPR050346 -
Tan05g1063 519 Pfam Flavin-binding monooxygenase-like 3 498 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
Tan05g1063 519 Gene3D - 346 504 IPR036188 -
Tan05g1063 519 Gene3D - 2 260 IPR036188 -
Tan05g1063 519 SUPERFAMILY FAD/NAD(P)-binding domain 350 516 IPR036188 -
Tan05g1063 519 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Tan05g1063 519 PIRSF FMO 2 512 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Tan05g1063 519 SUPERFAMILY FAD/NAD(P)-binding domain 2 278 IPR036188 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1063 K00485 - - csv:101206134 906.746
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g1063 Tan-Chr5:9028964 Tan05g1065 Tan-Chr5:9170559 2.30E-276 dispersed
Tan05g1063 Tan-Chr5:9028964 Tan05g1064 Tan-Chr5:9092467 8.00E-293 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g233 . . . . . . . . . . Cma02g00291 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Sed01g0637 Cmo02g00285 . . . . . . . Bhi10g01241 Tan05g1063 Cmetu02g1944 . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000621 2 8 2 2 1 4 2 5 5 4 3 5 4 3 4 4 4 1 1 3 4 3 2 4 4 3 1 4 3 7 102