Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1065 ATGGAAGCGAAGAAAGTGGCGATAATCGGAGCGGGAGTAAGTGGATTAGCGGCCTGCAAATTCACTCTATCCAAAGGATTCATTCCGATTGTCTTTGAGGCCAGAGGCGCCATTGGCGGCGTTTGGACCGAGACGCTGCAGACGACGTTGCTGCAGACGCCGAGAGAGATGTACCGCTTCTCCGATTTCCCCTGGCCGAAATCGGTGACTGAAGATTTTCCCAAGTATGATCAAGTTCTCGATTACATCAAATCTTACGCCGACCATTTCGGATTGTTGAAGCACATCAGATTTAACTCCAGAGTCCTTAGTATCGACTATGAAGGCTGCTCCGATGAGGAAGTTGAAGCTTGGACTCTTTGGGGCGGCTCCGGCGAGGCTTTCGGTGAACGGCGGAAATGGAGGCTCAACGTCGTTGATGCACGGACTAATGTTCCGCTTGAGGAAGTCGTGGTGGACTTCGTAGTACTCTGCATCGGAAGATTCAGCGATGTTCCAAACATCCCCAAATTTCCTCCAAATGGAGGTCCCGAAGCCTTCAAAGCCGGTAAGGTTCTTCACTCTCTCGAATATTCCGCCATGGATTTCGACAGTGCTTCGAAGCTCATCAAGGACAAGCAAGTCACCATCGTCGGTTTCCAGAAATCTGGTCTCGATCTCGCCATGGAATGCGCCAATGCCAATGGCCCGAAGAAACCTTGCACAGTGCTTTACAGAACCAAGCACTGGAACCTTACCGATTACCTTCCATGGGGGATCCCTATAGGTTTTCTCTACATGAATCGATTCTCCCAGCTTCTGATTCACAAACCTGGCGAGAGTTTCCTTCTCTATCTTCTCGCTATTCTTCTTTCCCCAATTAGATGGTTGTTCTCGAAGTTCGTGGAAACCTATTTGATAAAGAAGCAGGGATTAGCCAAATACGGAATGGTGCCGAACCAAAGCTTTTTGCAGGACATCAGTTCGTGTTTATTTGCAGTATTGCCTGAGAAATTGTTCGACAAAGTGGACGAAGGAAGCATCATTTTGAAGAAATCGCAGAGTTTTGGGTTCTGTGAAGAAGGTATCATGATCGAAGGAGAAACCAAACCGATTCGCTCAGATTTGGTCATTTTGGCTACTGGATACAGAGGAGATCAAAAGCTTAAAGAAATCTTTTCTGCCTCCATTTTTCGAGATTACATGACATTTCATGATTCAGCAGTTCCCATGTACAGGCAATGCATTCATCCCAGAATCCCACAACTAGCTGTGATTGGATTTTCGGAGAGCGCTTCGAACTTGTTCACCTCGGAGATACGGTGTCGATGGCTGGCCGAGTTTATGGACGGTACGTTCAAGCTACCGAGCATCAAGGAGATGGAGAAGGACATAGCCGACTGGGAGAAGGGCCTGAAAATTTACTCAGGTCCTTTCTTCAGGCGAGCTTGCATTGCCAGTTTGCATATTTGGTACAGTGATCAGCTCTGCAAGGACATGGGATGGAACCCCAAGAGGAAAAAGGGCTTCTTTGCTGACTTGTTTATGCCTTATGGCCCTTTAGACTATGCCTCCCCTTGA 1560 47.76 MEAKKVAIIGAGVSGLAACKFTLSKGFIPIVFEARGAIGGVWTETLQTTLLQTPREMYRFSDFPWPKSVTEDFPKYDQVLDYIKSYADHFGLLKHIRFNSRVLSIDYEGCSDEEVEAWTLWGGSGEAFGERRKWRLNVVDARTNVPLEEVVVDFVVLCIGRFSDVPNIPKFPPNGGPEAFKAGKVLHSLEYSAMDFDSASKLIKDKQVTIVGFQKSGLDLAMECANANGPKKPCTVLYRTKHWNLTDYLPWGIPIGFLYMNRFSQLLIHKPGESFLLYLLAILLSPIRWLFSKFVETYLIKKQGLAKYGMVPNQSFLQDISSCLFAVLPEKLFDKVDEGSIILKKSQSFGFCEEGIMIEGETKPIRSDLVILATGYRGDQKLKEIFSASIFRDYMTFHDSAVPMYRQCIHPRIPQLAVIGFSESASNLFTSEIRCRWLAEFMDGTFKLPSIKEMEKDIADWEKGLKIYSGPFFRRACIASLHIWYSDQLCKDMGWNPKRKKGFFADLFMPYGPLDYASP 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9170559 9188921 + Tan0007843.1 Tan05g1065 752373

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1065 519 Pfam Flavin-binding monooxygenase-like 3 500 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
Tan05g1065 519 PIRSF FMO 2 512 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Tan05g1065 519 FunFam Flavin-containing monooxygenase 2 176 - -
Tan05g1065 519 FunFam Flavin-containing monooxygenase 356 508 - -
Tan05g1065 519 Gene3D - 3 174 IPR036188 -
Tan05g1065 519 Gene3D - 357 503 IPR036188 -
Tan05g1065 519 Gene3D - 175 255 IPR036188 -
Tan05g1065 519 PANTHER DIMETHYLANILINE MONOOXYGENASE 3 513 IPR050346 -
Tan05g1065 519 SUPERFAMILY FAD/NAD(P)-binding domain 359 516 IPR036188 -
Tan05g1065 519 SUPERFAMILY FAD/NAD(P)-binding domain 2 275 IPR036188 -
Tan05g1065 519 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1065 K00485 - - csv:101206993 891.723
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g1063 Tan-Chr5:9028964 Tan05g1065 Tan-Chr5:9170559 2.30E-276 dispersed
Tan05g1065 Tan-Chr5:9170559 Tan09g1035 Tan-Chr9:62541159 5.60E-113 dispersed
Tan05g1064 Tan-Chr5:9092467 Tan05g1065 Tan-Chr5:9170559 6.00E-272 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g235 . Blo15g00431 Bda06g00437 . . . . . . . Cma02g00293 . Car02g00172 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Sed05g3471 Cmo02g00287 . . . . . . . Bhi10g01237 Tan05g1065 Cmetu11g0158 . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000621 2 8 2 2 1 4 2 5 5 4 3 5 4 3 4 4 4 1 1 3 4 3 2 4 4 3 1 4 3 7 102