Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1093 ATGGATTTCTCCCTCAAGTCTTTCAAATCCCACGGCTCTTACAAGTATGTGAGGAAGCTTTCTGGTGATCAAGAACAGCTTCCGATTCTTTCAGATCAGGAACCGGATAATCTTCACCGGAATCACTCCATTATGGCGCCGTCCGATGCATCTGACCGGAGAGAGGTCATCGTCAAGATCGATCAGTCTGATGCTTCGAGTAATGCATCATCGAGAGCGGTGGAGTCGGTGAACTCCAATGGGAGGATTTGGCGGGAGTCGAGCTATGATTTCTGGAATGATAGTGATGGTAGACGGAATAATGGTGAAGGTAGTAATGGCGATGGTAGGAGTGAGGATTTTGAGTTTAGGCAACATAGGAAGGATGTGGAGGATCCGCCTTCGAAGCTTATTGGACAGTTTCTGCACAAGCAGAAGGCGTCGGGAGAGATGTCGTTGGATATGGATATGGAAATGTTGGAACTACCACTTGATAAGACTCTGCCTCCGGTGGCGGAATCTCCGATGCGACGGAGCTCCAGAGAGTTGAAGGTCTCGTTCGAGTCTATTTCAGAGATTTCTGAAAACGATTCGATTCGAAGACGGCATAGAGACTCGCCGGCCGATGAAGAACATAGAGGAGGACAACAATCGCAGAAGGGTGATCGTCGAGCTTATGGCAATGGTCATGATGATAGTGGTGATGAGGTTGTGAGATGCACATCTAATTCTTCGTTTCAGAGAAGCGTATCGTTCCAAAGGAAATCTAGCTTGCTTAGGGCTAAAACTAAGTCCAGACTGTTGGACCCGCCTGAACAGCCGGACCGGAGGTCAGGGCGAGTACCAAAATCAGGGCAAATGCGCTCGGGATTGTTGTCGAAAGCTTTGGATGAAGAAGACGATGATCCATTCTTGGAAGAAGATCTTCCAGATGAGTATAAGAAGGCTAATCTTGGTGTTCTTACTCTGTTACAATGGGCGAGTTTGATTTTGATCATCGCAGCATTAGTTTGCACTCTGACAATCCCTTACTGGAGGCAAAAGAATCTATGGAAGCTTAAGTTATGGAAATGGGAGGTTATGATTCTAGTTCTGATATGTGGAAGGCTGGTTTCTGGATGGGGGATCAGGATAATCGTCTTCTTCATCGAGAGAAACTTTCTACTGCGTAAAAGGGTTCTATACTTCGTTTATGGGGTCAGAAAGGCAGTCCAGAATTGTCTTTGGTTAGGTCTTGTTTTAATTGCTTGGAACTTTCTGTTCGATGACAAAGTTCAGAGAGAAGTAAAAAGCAATGCCCTCGAGTATGTGACTAAAGTTCTTGTATGCCTTCTTGTAACCACTTTGGTTTGGCTGGTGAAAACGCTAATGGTGAAGGTTCTGGCCTCTTCTTTCCATGTGAGTACATATTTTGATAGGATTCAGGATGCACTGTTTAACCAATATGTAATTGAGACACTGTCAGGGCCGCCATTGATAGAGATTCAAAAGAACGAGGAAGAAGAAGAGAGACTTGCAGAAGAGGTTATAAAGTTACAGAATGCAGGGGCCACCATACCCCCTGATCTAAAGGCAACTGCCTTTTCAACTCCAAAGGGTGGACGATTGATTGGTAGTGGAGGGCTGCAGAGAAGTCCTCGTGGAAGAAGTGCCAAGCTCTCACGAGTGCTATCCAAAAAGGGCGATGAGGGTATAACAATTGATCACTTGCATAAGCTTAGTCCTAAGAATGTGTCTGCTTGGAATATGAAGAGGTTGATGAATATTGTTCGACATGGGGCTCTTTCAACTTTGGATGAACAGATAAAGGATTCAACTCATGAGGAAGATGAATCAGCCACACAGATAAGGAGTGAATTTGAGGCAAAAGTTGCTGCTAAGAAGATTTTTCAGAATGTGGCTAGGCATGGTTCCAAATACATCTACCTAGAGGACTTGATGCGTTTCATGCAAGAAGATGAGGCTTCAAAAACCATGAGTCTCTTTGAAGGAGCATCTGAGAGCAGGAAAATAAGCAAATCATCCTTAAAAAACTGGGTGGTAAGAGCTATCTTATCAAAATCTAAATACATTCATTGTTCTTGCTTGACATGTTTAACATTGTAA 2085 44.22 MDFSLKSFKSHGSYKYVRKLSGDQEQLPILSDQEPDNLHRNHSIMAPSDASDRREVIVKIDQSDASSNASSRAVESVNSNGRIWRESSYDFWNDSDGRRNNGEGSNGDGRSEDFEFRQHRKDVEDPPSKLIGQFLHKQKASGEMSLDMDMEMLELPLDKTLPPVAESPMRRSSRELKVSFESISEISENDSIRRRHRDSPADEEHRGGQQSQKGDRRAYGNGHDDSGDEVVRCTSNSSFQRSVSFQRKSSLLRAKTKSRLLDPPEQPDRRSGRVPKSGQMRSGLLSKALDEEDDDPFLEEDLPDEYKKANLGVLTLLQWASLILIIAALVCTLTIPYWRQKNLWKLKLWKWEVMILVLICGRLVSGWGIRIIVFFIERNFLLRKRVLYFVYGVRKAVQNCLWLGLVLIAWNFLFDDKVQREVKSNALEYVTKVLVCLLVTTLVWLVKTLMVKVLASSFHVSTYFDRIQDALFNQYVIETLSGPPLIEIQKNEEEEERLAEEVIKLQNAGATIPPDLKATAFSTPKGGRLIGSGGLQRSPRGRSAKLSRVLSKKGDEGITIDHLHKLSPKNVSAWNMKRLMNIVRHGALSTLDEQIKDSTHEEDESATQIRSEFEAKVAAKKIFQNVARHGSKYIYLEDLMRFMQEDEASKTMSLFEGASESRKISKSSLKNWVVRAILSKSKYIHCSCLTCLTL 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9643270 9647668 + Tan0022520.2 Tan05g1093 752401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1093 694 MobiDBLite consensus disorder prediction 187 231 - -
Tan05g1093 694 MobiDBLite consensus disorder prediction 90 130 - -
Tan05g1093 694 MobiDBLite consensus disorder prediction 187 230 - -
Tan05g1093 694 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 36 679 IPR016688 GO:0005886(PANTHER)|GO:0006820(PANTHER)|GO:0008381(PANTHER)
Tan05g1093 694 Coils Coil 488 511 - -
Tan05g1093 694 MobiDBLite consensus disorder prediction 256 280 - -
Tan05g1093 694 MobiDBLite consensus disorder prediction 90 127 - -
Tan05g1093 694 MobiDBLite consensus disorder prediction 258 275 - -
Tan05g1093 694 MobiDBLite consensus disorder prediction 21 54 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0642 Tan-Chr2:5908929 Tan05g1093 Tan-Chr5:9643270 1.10E-234 dispersed
Tan05g1093 Tan-Chr5:9643270 Tan09g1102 Tan-Chr9:63336187 3.40E-73 dispersed
Tan05g1092 Tan-Chr5:9643270 Tan05g1093 Tan-Chr5:9643270 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1093 K22048 - csv:101210264 1019.61