Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan05g1123 | ATGGCCGATTCTCAACCGCTGCTGAAGAACCAACAGGAGTTGCCGGAGTCCAGTCGCAAAGCTCCGCGAGTTGTCTCACTCGACGTCTTTCGCGGCCTCAGCGTCTTTATGATGATGTTCGTGGACTACGGTGGCTCGTTTTTGCCAATTATCGCTCATTCGTCATGGAATGGACTTCATTTGGCTGATTTTGTAATGCCTTGGTTTCTATTTATTGCGGGAGCCTCGCTTGGACTTGTTTATAAAGAAGTACAAAGTAAAGTGACCGCTACAAGGAATGCAGCATGCAGGGCTTTGTACCTTTTTCTCCTGGGTGTTCTTCTTCAAGGTGGTTACTTTCATGGAATAACATCTTTGACATATGGTGTTGATATGGAAAGGATTAGGTGGCTTGGCATTTTACAGAGAATATCTGTTGGATACTTGATTACTGCACTATGTGAGATCTGGCTAACTCGTTGTACACGTGAAAGAGCTCAAAATACTAAGAGTTTCAGCTGGCATTGGTATATTATATTTTTTCTGTTGTCATTGTATATGGGACTGTCGTATGGTTTATATGTTCCAGATTGGGACTTTAAAATATCAGCCACGAGCTCTTCACTTCCATCAAATGGAACCCATGTTTACATGGTGAATTGTTCTGTTCGAGGTGATCTGGGACCTGCTTGTAATTCTGTTGGGATGATTGATCGTTATGTTCTTGGTATTCACCATTTGTATACTAAACCTGTGTACAGAAATCTGAAGGAGTGCAACATTTCCTCCGGTGGTCAAGTTCCTGAGACTTCACCTTCATGGTGTCATGCTCCTTTTGAACCTGAAGGTCTTTTAAGCTCTTTAACAGCTTCAGTGGCATGCATAATAGGACTTCAGTATGGTCACATTCTTGCCAATGTACAGGATCACAAAAGTCGCACCAATAGCTGGTTCTCACTCTCGCTTAAGATTTTGGCCCTCGGAATATTCCTCGTCTTTATAGGTATCCCTGTAAATAAGTCCCTCTACACAGTCAGCTACATGTTAATTACTTCAGCATCAGCAGGAATTATCTTTTGTGCTCTATATATCTTGACGCGGCATCGTATAAAGAACAGCTTACCACCTTTTTTCCTCGAGTCTGAAGGTCTCTTAATTTCTATAGGTGGATGTCCACGGCTATCGACGCTTGACATGTATTCTGGAGTGGATGGGGAAGCATGCTTTGAATCTGTCGACCGTATTCGAAATCACCCTGCAAATATTAAGCAAAAAGGCCGTCAGCAGTCTAAGGACTATGTGGATCCGCCACCAGCTCCATTCATGGGGTTGTCCGAGCTGAAGCTATGGTCCTTTTACAGAGCTGTAATTGCAGAGTTCATGGCCACACTCCTTTTCCTGTACATCACCATCGCCACTGTCATTGGGAACAATGCACAAACAGGACCCTGTTCTGGCGTTGGCCTCCTCGGCATAGCATGGTCCTTCGGCGCCATGATCTTCGTCCTTGTTTACTGTACTGCTGGTATTTCAGGTGGCCATATCAATCCCGCCGTGACGTTCGGGCTGCTGCTGGCCAGAAGGGTGTCCCTGATCCGCGCGGTGGCTTACATAGCGGCGCAGTGTCTGGGAGCCATTGCCGGCGTTGCATTGGTTGAATCTTTCATGAGGCACGCCTACAACGCCAACGGCGGCGGAGCCAACCTCGTCGCCGCCGGCTTCAGCAAAGGCACCGCCCTCGGGGCCGAGATCATTGGCACTTTTCTGCTGGTCTATACTGTGTTCTCTGCCACTGACCCAAAGAGAAACGCCCGCGACTCCCATGTTCCTGTTTTGGCTCCATTGCCCATCGGACTTGCCGTCTTTGTGGTGCATCTGGCCACCATTCCAATTACAGGCACCGGCATCAACCCTGCTCGGAGCTTAGGCGCTGCGGTCATGTTCAACAACACAAGAGTCTGGAGCCACCATTGGATTTTCTGGGTTGGACCATTTGTTGGGGCGATGGCAGCGGCGGTTTACCATCAATACGTTCTTAGAGCGGCGGCCGTGAAGGCACTTGTATCTTTCCGCAGCAACCGATCCACTTGA | 2070 | 47.87 | MADSQPLLKNQQELPESSRKAPRVVSLDVFRGLSVFMMMFVDYGGSFLPIIAHSSWNGLHLADFVMPWFLFIAGASLGLVYKEVQSKVTATRNAACRALYLFLLGVLLQGGYFHGITSLTYGVDMERIRWLGILQRISVGYLITALCEIWLTRCTRERAQNTKSFSWHWYIIFFLLSLYMGLSYGLYVPDWDFKISATSSSLPSNGTHVYMVNCSVRGDLGPACNSVGMIDRYVLGIHHLYTKPVYRNLKECNISSGGQVPETSPSWCHAPFEPEGLLSSLTASVACIIGLQYGHILANVQDHKSRTNSWFSLSLKILALGIFLVFIGIPVNKSLYTVSYMLITSASAGIIFCALYILTRHRIKNSLPPFFLESEGLLISIGGCPRLSTLDMYSGVDGEACFESVDRIRNHPANIKQKGRQQSKDYVDPPPAPFMGLSELKLWSFYRAVIAEFMATLLFLYITIATVIGNNAQTGPCSGVGLLGIAWSFGAMIFVLVYCTAGISGGHINPAVTFGLLLARRVSLIRAVAYIAAQCLGAIAGVALVESFMRHAYNANGGGANLVAAGFSKGTALGAEIIGTFLLVYTVFSATDPKRNARDSHVPVLAPLPIGLAVFVVHLATIPITGTGINPARSLGAAVMFNNTRVWSHHWIFWVGPFVGAMAAAVYHQYVLRAAAVKALVSFRSNRST | 689 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 10082063 | 10091868 | - | Tan0012473.1 | Tan05g1123 | 752431 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan05g1123 | 689 | SUPERFAMILY | Aquaporin-like | 439 | 673 | IPR023271 | - | |
| Tan05g1123 | 689 | PANTHER | LD22376P | 14 | 359 | - | - | |
| Tan05g1123 | 689 | FunFam | Probable aquaporin PIP1-2 | 432 | 687 | - | - | |
| Tan05g1123 | 689 | CDD | MIP | 447 | 671 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Tan05g1123 | 689 | NCBIfam | MIP family channel protein | 451 | 667 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Tan05g1123 | 689 | Gene3D | Glycerol uptake facilitator protein. | 432 | 689 | IPR023271 | - | |
| Tan05g1123 | 689 | Pfam | Major intrinsic protein | 439 | 668 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Tan05g1123 | 689 | PRINTS | Major intrinsic protein family signature | 447 | 466 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Tan05g1123 | 689 | PRINTS | Major intrinsic protein family signature | 575 | 593 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Tan05g1123 | 689 | PRINTS | Major intrinsic protein family signature | 611 | 633 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Tan05g1123 | 689 | PRINTS | Major intrinsic protein family signature | 489 | 513 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Tan05g1123 | 689 | PRINTS | Major intrinsic protein family signature | 526 | 545 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Tan05g1123 | 689 | PRINTS | Major intrinsic protein family signature | 651 | 671 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Tan05g1123 | 689 | ProSitePatterns | MIP family signature. | 507 | 515 | IPR022357 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan05g1123 | Tan-Chr5:10082063 | Tan11g0853 | Tan-Chr11:7002074 | 1.50E-108 | dispersed | |
| Tan08g0612 | Tan-Chr8:6221153 | Tan05g1123 | Tan-Chr5:10082063 | 6.00E-80 | transposed | |
| Tan08g1849 | Tan-Chr8:70690247 | Tan05g1123 | Tan-Chr5:10082063 | 1.30E-79 | transposed | |
| Tan02g0671 | Tan-Chr2:6242704 | Tan05g1123 | Tan-Chr5:10082063 | 4.70E-122 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan05g1123 | - | - | - | 0.0 |