Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g1131 | ATGGAAGACGGCGAGCTTGAATCCTCGAATCCGGAAGTGTTCTCGAGTTCGAATGTTGTTGAGCTTCCGAGCAGTTGCTCGATGGATAGTTTCTTGGATGAAATTCTGAAGGATACTCATGCTTGCACACACGCTCATACTTGCAACCCTCCTGGTCCTGATTACTCACATACGCACACCTGTTTTCATGTCCATACTAAAATTGTCTCCTCCCCCACGGAAGAAAAGGTTTCCACTGATGACACAGCAGACTCTGTTGATAAAAAGACTAAGAAACGTCCGCTAGGTAATCGCGAAGCAGTTCGTAAATACCGTGAGAAGAAGAAGGCAAGAGCTGCATCATTGGAAGATGAAGTTGTGAGATTGAGGACCCTGAATCAGCAACTGTTGAAGAGATTGCAAGGTCAGGCTGCATTGGAGGCTGAGATTTCCAGGCTCAAATGTTTGCTTGTGGATATTCGGGGAAGGATTGAAGGGGAGATTGGAACATTTCCATATCAGAAACCAGTCAGTTCAACTCTGCCCAATCAAAATGTGCCTGGTAGTTACATGATAAATCCATGTAATGTGCAGTGCAATGATCAGGCATATTGCCTTCATGCAGGGGCCGATGGAAAAAGTGGAGAGAGCATTTTGTTGAACGGGCAAAGTTTTAGTGGGTGTGACTTTGAAAATCTTCAGTGCTTGGCAAATCAAAACGCAGAAGGGAAGGAACTTCCTGACTGTGGATTAGGGGACACAATTTCTAACATTAATTGCTCCGAATTAAATCAGAAGAAAGGTGTATATGAAAGATTCTGTCCAAGTTATGTGTTATAA | 819 | 43.71 | MEDGELESSNPEVFSSSNVVELPSSCSMDSFLDEILKDTHACTHAHTCNPPGPDYSHTHTCFHVHTKIVSSPTEEKVSTDDTADSVDKKTKKRPLGNREAVRKYREKKKARAASLEDEVVRLRTLNQQLLKRLQGQAALEAEISRLKCLLVDIRGRIEGEIGTFPYQKPVSSTLPNQNVPGSYMINPCNVQCNDQAYCLHAGADGKSGESILLNGQSFSGCDFENLQCLANQNAEGKELPDCGLGDTISNINCSELNQKKGVYERFCPSYVL | 272 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 10154301 | 10157679 | - | Tan0011604.2 | Tan05g1131 | 752439 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g1131 | 272 | SUPERFAMILY | Leucine zipper domain | 89 | 135 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan05g1131 | 272 | FunFam | Basic leucine zipper 24 | 75 | 153 | - | - | |
Tan05g1131 | 272 | MobiDBLite | consensus disorder prediction | 77 | 97 | - | - | |
Tan05g1131 | 272 | Pfam | Basic region leucine zipper | 87 | 134 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan05g1131 | 272 | Coils | Coil | 98 | 132 | - | - | |
Tan05g1131 | 272 | SMART | brlzneu | 85 | 152 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan05g1131 | 272 | MobiDBLite | consensus disorder prediction | 72 | 97 | - | - | |
Tan05g1131 | 272 | CDD | bZIP | 90 | 144 | - | - | |
Tan05g1131 | 272 | Gene3D | - | 75 | 153 | - | - | |
Tan05g1131 | 272 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 87 | 134 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan05g1131 | 272 | PANTHER | CCAAT/ENHANCER BINDING PROTEIN | 1 | 189 | IPR031106 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0006357(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g1131 | Tan-Chr5:10154301 | Tan05g1133 | Tan-Chr5:10154301 | 2.30E-134 | dispersed | |
Tan05g1130 | Tan-Chr5:10154301 | Tan05g1131 | Tan-Chr5:10154301 | 6.80E-134 | tandem | |
Tan05g1131 | Tan-Chr5:10154301 | Tan05g1132 | Tan-Chr5:10154301 | 1.20E-141 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27483 | PF07716 | bZIP_2 | 2.30E-15 | CL0018 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g1131 | K25785 | - | csv:101219501 | 480.715 |