Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1134 ATGGAAGACGGCGAGCTTGAATCCTCGAATCCGGAAGTGTTCTCGAGTTCGAATGTTGTTGAGCTTCCGAGCAGTTGCTCGATGGATAGTTTCTTGGATGAAATTCTGAAGGATACTCATGCTTGCACACACGCTCATACTTGCAACCCTCCTGGTCCTGATTACTCACATACGCACACCTGTTTTCATGTCCATACTAAAATTGTCTCCTCCCCCACGGAAGAAAAGGTTTCCACTGATGACACAGCAGACTCTGTTGATAAAAAGACTAAGAAACGTCCGCTAGGTAATCGCGAAGCAGTTCGTAAATACCGTGAGAAGAAGAAGGCAAGAGCTGCATCATTGGAAGATGAAGTTGTGAGATTGAGGACCCTGAATCAGCAACTGTTGAAGAGATTGCAAGGTCAGGCTGCATTGGAGGCTGAGATTTCCAGGCTCAAATGTTTGCTTGTGGATATTCGGGGAAGGATTGAAGGGGAGATTGGAACATTTCCATATCAGAAACCAGTCAGTTCAACTCTGCCCAATCAAAATGTGCCTGGTAGTTACATGATAAATCCATGTAATGTGCAGTGCAATGATCAGGCATATTGCCTTCATGCAGGGGCCGATGGAAAAAGTGGAGAGAGCATTTTGTTGAACGGGCAAAGTTTTAGTGGGTGTGACTTTGAAAATCTTCAGTGCTTGGCAAATCAAAACGCAGAAGGGAAGGAACTTCCTGACTGTGGATTAGGGGACACAATTTCTAACATTAATTGCTCCGAATTAAATCAGAAGAAAGGTGAAATCTGA 792 44.32 MEDGELESSNPEVFSSSNVVELPSSCSMDSFLDEILKDTHACTHAHTCNPPGPDYSHTHTCFHVHTKIVSSPTEEKVSTDDTADSVDKKTKKRPLGNREAVRKYREKKKARAASLEDEVVRLRTLNQQLLKRLQGQAALEAEISRLKCLLVDIRGRIEGEIGTFPYQKPVSSTLPNQNVPGSYMINPCNVQCNDQAYCLHAGADGKSGESILLNGQSFSGCDFENLQCLANQNAEGKELPDCGLGDTISNINCSELNQKKGEI 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10155673 10157679 - Tan0011604.5 Tan05g1134 752442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1134 263 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 188 IPR031106 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0006357(PANTHER)
Tan05g1134 263 MobiDBLite consensus disorder prediction 77 98 - -
Tan05g1134 263 FunFam Basic leucine zipper 24 75 153 - -
Tan05g1134 263 Coils Coil 98 132 - -
Tan05g1134 263 SUPERFAMILY Leucine zipper domain 89 135 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g1134 263 SMART brlzneu 85 152 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g1134 263 MobiDBLite consensus disorder prediction 72 98 - -
Tan05g1134 263 Pfam Basic region leucine zipper 87 134 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g1134 263 Gene3D - 75 153 - -
Tan05g1134 263 CDD bZIP 90 144 - -
Tan05g1134 263 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0685 Tan-Chr2:6407378 Tan05g1134 Tan-Chr5:10155673 8.70E-86 dispersed
Tan05g1132 Tan-Chr5:10154301 Tan05g1134 Tan-Chr5:10155673 2.30E-134 dispersed
Tan05g1133 Tan-Chr5:10154301 Tan05g1134 Tan-Chr5:10155673 6.80E-134 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27486 PF07716 bZIP_2 1.70E-14 CL0018 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1134 K25785 - csv:101219501 480.715